RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 LOC389332A0A1B0GUA5 103 aa7.63□□□□□ -1.19
VCP-204ENST00000466100 LINC01546A6NGU7 62 aa7.63□□□□□ -1.19
VCP-204ENST00000466100 PMCHP20382 165 aa7.63□□□□□ -1.19
VCP-204ENST00000466100 IFI27P40305 119 aaPredicted RBP7.63□□□□□ -1.19
VCP-204ENST00000466100 TMEM97Q5BJF2 176 aa7.63□□□□□ -1.19
VCP-204ENST00000466100 URB1-AS1Q96HZ7 61 aa7.63□□□□□ -1.19
VCP-204ENST00000466100 UPK3BQ9BT76 320 aa7.63□□□□□ -1.19
VCP-204ENST00000466100 CHCHD7Q9BUK0 85 aa7.63□□□□□ -1.19
VCP-204ENST00000466100 NXT2Q9NPJ8 142 aaKnown RBP7.63□□□□□ -1.19
VCP-204ENST00000466100 HIST1H2BKO60814 126 aa7.62□□□□□ -1.19
VCP-204ENST00000466100 HIST1H2BJP06899 126 aa7.62□□□□□ -1.19
VCP-204ENST00000466100 ESDP10768 282 aa7.62□□□□□ -1.19
VCP-204ENST00000466100 HIST1H2BOP23527 126 aa7.62□□□□□ -1.19
VCP-204ENST00000466100 HIST1H2BBP33778 126 aa7.62□□□□□ -1.19
VCP-204ENST00000466100 CCL18P55774 89 aa7.62□□□□□ -1.19
VCP-204ENST00000466100 HIST1H2BDP58876 126 aa7.62□□□□□ -1.19
VCP-204ENST00000466100 HIST1H2BCP62807 126 aa7.62□□□□□ -1.19
VCP-204ENST00000466100 HIST2H2BEQ16778 126 aa7.62□□□□□ -1.19
VCP-204ENST00000466100 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.62□□□□□ -1.19
VCP-204ENST00000466100 HIST1H2BHQ93079 126 aa7.62□□□□□ -1.19
VCP-204ENST00000466100 HIST1H2BNQ99877 126 aa7.62□□□□□ -1.19
VCP-204ENST00000466100 HIST1H2BMQ99879 126 aa7.62□□□□□ -1.19
VCP-204ENST00000466100 IGHV1-24A0A0C4DH33 117 aa7.61□□□□□ -1.19
VCP-204ENST00000466100 TCAPO15273 167 aa7.61□□□□□ -1.19
VCP-204ENST00000466100 LINC00310P59036 64 aa7.61□□□□□ -1.19
VCP-204ENST00000466100 Q0VG73 95 aa7.61□□□□□ -1.19
VCP-204ENST00000466100 LGALS9CQ6DKI2 356 aa7.61□□□□□ -1.19
VCP-204ENST00000466100 WFDC10BQ8IUB3 73 aa7.61□□□□□ -1.19
VCP-204ENST00000466100 LINC00476Q8WZB0 136 aa7.61□□□□□ -1.19
VCP-204ENST00000466100 KIR2DL4Q99706 377 aa7.61□□□□□ -1.19
VCP-204ENST00000466100 DNAH17Q9UFH2 4485 aa7.6□□□□□ -1.19
VCP-204ENST00000466100 TRBV25-1A0A075B6N4 114 aa7.6□□□□□ -1.19
VCP-204ENST00000466100 K7EMI3 77 aa7.6□□□□□ -1.19
VCP-204ENST00000466100 FCER1GP30273 86 aa7.6□□□□□ -1.19
VCP-204ENST00000466100 AMTP48728 403 aa7.6□□□□□ -1.19
VCP-204ENST00000466100 TMEM243Q9BU79 118 aa7.6□□□□□ -1.19
VCP-204ENST00000466100 NIT1Q86X76 327 aa7.59□□□□□ -1.19
VCP-204ENST00000466100 Q8N3U1 123 aa7.59□□□□□ -1.19
VCP-204ENST00000466100 C20orf203Q8NBC4 194 aa7.59□□□□□ -1.19
VCP-204ENST00000466100 PRSS3P2Q8NHM4 247 aa7.59□□□□□ -1.19
VCP-204ENST00000466100 RYR3Q15413 4870 aa7.59□□□□□ -1.19
VCP-204ENST00000466100 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.58□□□□□ -1.2
VCP-204ENST00000466100 A0A096LNJ9 63 aa7.58□□□□□ -1.2
VCP-204ENST00000466100 TRAV8-6A0A0B4J262 113 aa7.58□□□□□ -1.2
VCP-204ENST00000466100 IGKV2-29A2NJV5 120 aaPredicted RBP7.58□□□□□ -1.2
VCP-204ENST00000466100 C1orf196B1AJZ1 125 aa7.58□□□□□ -1.2
VCP-204ENST00000466100 DNAH10OSP0CZ25 163 aa7.58□□□□□ -1.2
VCP-204ENST00000466100 LAGE3Q14657 143 aa7.58□□□□□ -1.2
VCP-204ENST00000466100 ORMDL2Q53FV1 153 aa7.58□□□□□ -1.2
VCP-204ENST00000466100 LINC01556Q5JQF7 62 aa7.58□□□□□ -1.2
VCP-204ENST00000466100 FA2HQ7L5A8 372 aa7.58□□□□□ -1.2
VCP-204ENST00000466100 UBE2DNLQ8IWF7 75 aa7.58□□□□□ -1.2
VCP-204ENST00000466100 CHCHD5Q9BSY4 110 aa7.58□□□□□ -1.2
VCP-204ENST00000466100 H7C423 109 aa7.57□□□□□ -1.2
VCP-204ENST00000466100 SIVA1O15304 175 aa7.57□□□□□ -1.2
VCP-204ENST00000466100 LINC00614P0C842 121 aa7.57□□□□□ -1.2
VCP-204ENST00000466100 RPL39P62891 51 aaKnown RBP7.57□□□□□ -1.2
VCP-204ENST00000466100 GAGE6Q13070 117 aa7.57□□□□□ -1.2
VCP-204ENST00000466100 MPV17L2Q567V2 206 aa7.57□□□□□ -1.2
VCP-204ENST00000466100 CHCHD1Q96BP2 118 aaKnown RBP7.57□□□□□ -1.2
VCP-204ENST00000466100 AP5S1Q9NUS5 200 aa7.57□□□□□ -1.2
VCP-204ENST00000466100 SERF1AO75920 110 aa7.56□□□□□ -1.2
VCP-204ENST00000466100 RAB5BP61020 215 aa7.56□□□□□ -1.2
VCP-204ENST00000466100 COA6Q5JTJ3 125 aaKnown RBP7.56□□□□□ -1.2
VCP-204ENST00000466100 RNASEKQ6P5S7 137 aaKnown RBP7.56□□□□□ -1.2
VCP-204ENST00000466100 MRPL52Q86TS9 123 aaKnown RBP7.56□□□□□ -1.2
VCP-204ENST00000466100 BAGE3Q86Y29 109 aa7.56□□□□□ -1.2
VCP-204ENST00000466100 FAM104AQ969W3 186 aa7.56□□□□□ -1.2
VCP-204ENST00000466100 Q9H8V8 135 aa7.56□□□□□ -1.2
VCP-204ENST00000466100 FAT2Q9NYQ8 4349 aa7.56□□□□□ -1.2
VCP-204ENST00000466100 LCE6AA0A183 80 aa7.55□□□□□ -1.2
VCP-204ENST00000466100 A0A1B0GUV1 79 aa7.55□□□□□ -1.2
VCP-204ENST00000466100 NUPR1O60356 82 aa7.55□□□□□ -1.2
VCP-204ENST00000466100 FGF6P10767 208 aa7.55□□□□□ -1.2
VCP-204ENST00000466100 PKIAP61925 76 aa7.55□□□□□ -1.2
VCP-204ENST00000466100 RBX1P62877 108 aa7.55□□□□□ -1.2
VCP-204ENST00000466100 C2orf66Q6UXQ4 117 aa7.55□□□□□ -1.2
VCP-204ENST00000466100 TIMM21Q9BVV7 248 aa7.55□□□□□ -1.2
VCP-204ENST00000466100 KRTAP1-5Q9BYS1 174 aa7.55□□□□□ -1.2
VCP-204ENST00000466100 UBE2D4Q9Y2X8 147 aa7.55□□□□□ -1.2
VCP-204ENST00000466100 DNAH11Q96DT5 4516 aa7.54□□□□□ -1.2
VCP-204ENST00000466100 IGLV4-60A0A075B6I1 120 aa7.54□□□□□ -1.2
VCP-204ENST00000466100 UBE2L6O14933 153 aa7.54□□□□□ -1.2
VCP-204ENST00000466100 LY6G6CO95867 125 aa7.54□□□□□ -1.2
VCP-204ENST00000466100 ZNF25P17030 456 aaPredicted RBP7.54□□□□□ -1.2
VCP-204ENST00000466100 Q8N976 141 aa7.54□□□□□ -1.2
VCP-204ENST00000466100 TOMM6Q96B49 74 aa7.54□□□□□ -1.2
VCP-204ENST00000466100 CSDC2Q9Y534 153 aaKnown RBP7.54□□□□□ -1.2
VCP-204ENST00000466100 A0A087WX48 190 aa7.53□□□□□ -1.2
VCP-204ENST00000466100 IGHV3-30P01768 117 aa7.53□□□□□ -1.2
VCP-204ENST00000466100 IGHV3-33P01772 117 aa7.53□□□□□ -1.2
VCP-204ENST00000466100 IGHV3-30-3P0DP02 117 aa7.53□□□□□ -1.2
VCP-204ENST00000466100 IGHV3-30-5P0DP03 117 aa7.53□□□□□ -1.2
VCP-204ENST00000466100 BTF3P20290 206 aaKnown RBP7.53□□□□□ -1.2
VCP-204ENST00000466100 PMCHL1Q16048 86 aa7.53□□□□□ -1.2
VCP-204ENST00000466100 TMEM18Q96B42 140 aa7.53□□□□□ -1.2
VCP-204ENST00000466100 SPANXA1Q9NS26 97 aa7.53□□□□□ -1.2
VCP-204ENST00000466100 CYSLTR1Q9Y271 337 aa7.53□□□□□ -1.2
VCP-204ENST00000466100 PYGO1Q9Y3Y4 419 aa7.53□□□□□ -1.2
VCP-204ENST00000466100 NBDYA0A0U1RRE5 68 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms