RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 PHLDA3Q9Y5J5 127 aa3.2□□□□□ -1.9
EXOSC3-204ENST00000465860 IGHV3-38A0A0C4DH36 116 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 XKRY2A2RUG3 117 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 VCYO14598 125 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 CXCL1P09341 107 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 OR5AL1P0C617 328 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 CEBPGP53567 150 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 FOXA3P55318 350 aaPredicted RBP3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 LINC01547P58512 204 aaPredicted RBP3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 FAM74A3Q4VXF1 159 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 TTC32Q5I0X7 151 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 OR10J3Q5JRS4 329 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 WDR73Q6P4I2 378 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 UQCC3Q6UW78 93 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 LYZL1Q6UWQ5 148 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 SPATA12Q7Z6I5 190 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 DAZ4Q86SG3 579 aaKnown RBP3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 ZFP82Q8N141 532 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 OR2D3Q8NGH3 330 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 ATP6V0E2Q8NHE4 81 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 DEFB104AQ8WTQ1 72 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 GTSF1Q8WW33 167 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 SMIM7Q9BQ49 75 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 PRADC1Q9BSG0 188 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 TPPP3Q9BW30 176 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 DAZ3Q9NR90 486 aaKnown RBP3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 LY96Q9Y6Y9 160 aa3.19□□□□□ -1.9
EXOSC3-204ENST00000465860 ZNF727A8MUV8 499 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 CIDEAO60543 219 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 SRP19P09132 144 aaKnown RBP3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 EVI2AP22794 236 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 RPS20P60866 119 aaKnown RBP3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 UBE2D3P61077 147 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 UBE2D2P62837 147 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 WFDC2Q14508 124 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 ZNF56Q15929 161 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 NDUFA5Q16718 116 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 LINC01556Q5JQF7 62 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 SOHLH1Q5JUK2 328 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 LELP1Q5T871 98 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 NTM-AS1Q6ZSK4 140 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 COMMD7Q86VX2 200 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 MAPKAPK5-AS1Q8N8E1 139 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 FER1L6-AS1Q8NA97 138 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 Q9HAA7 133 aa3.18□□□□□ -1.9
EXOSC3-204ENST00000465860 A0A087WTM6 91 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 TRAV26-2A0A0B4J265 109 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 LRCOL1A6NCL2 159 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 C16orf90A8MZG2 172 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 IBA57-AS1B1ANH7 110 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 M0QY20 66 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 P01737 135 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 VPREB1P12018 145 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 NTF3P20783 257 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 RAB4BP61018 213 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 IFITM2Q01629 132 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 PNRC1Q12796 327 aaPredicted RBP3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 SPANXN1Q5VSR9 72 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 SH2D6Q7Z4S9 175 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 NIT1Q86X76 327 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 KRTAP7-1Q8IUC3 87 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 C15orf54Q8N8G6 183 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 OR10G8Q8NGN5 311 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 NAT8Q9UHE5 227 aa3.17□□□□□ -1.9
EXOSC3-204ENST00000465860 SRRM2Q9UQ35 2752 aaKnown RBP3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 TRBV7-3A0A075B6L6 115 aa3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 TRAV8-6A0A0B4J262 113 aa3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 LINC00862A6NCI5 91 aa3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 LECT2O14960 151 aa3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 MGPP08493 103 aa3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 CTRLP40313 264 aa3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 KRTAP10-1P60331 282 aa3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 ADIRFQ15847 76 aa3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 TMEM241Q24JQ0 296 aa3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 MPV17L2Q567V2 206 aa3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 LCE3CQ5T5A8 94 aa3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 LINC01551Q86U37 167 aa3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 NFE4Q86UQ8 179 aa3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 BORCS7Q96B45 105 aa3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 RPL39LQ96EH5 51 aaKnown RBP3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 CNFNQ9BYD5 112 aa3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 RPP21Q9H633 154 aaKnown RBP3.16□□□□□ -1.9
EXOSC3-204ENST00000465860 TRAV9-2A0A087WT02 112 aa3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 TRBV6-8A0A0A6YYG3 113 aa3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 TRBV10-1A0A0K0K1A3 114 aa3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 PPP1R2P9O14990 202 aa3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 GATCO43716 136 aaKnown RBP3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 RPL23P62829 140 aaKnown RBP3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 HAMPP81172 84 aa3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 KRTAP5-4Q6L8H1 288 aa3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 ENHOQ6UWT2 76 aa3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 FAM231DQ6ZW35 169 aa3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 Q8N976 141 aa3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 GATD1Q8NB37 220 aa3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 PGLYRP4Q96LB8 373 aa3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 AP1S3Q96PC3 154 aa3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 KRTAP4-4Q9BYR3 166 aa3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 KLK12Q9UKR0 248 aa3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 V9GYV3 84 aa3.15□□□□□ -1.91
EXOSC3-204ENST00000465860 PKHD1L1Q86WI1 4243 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms