RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 TRBV10-2A0A0K0K1G8 114 aa9.25□□□□□ -0.93
CLCNKA-204ENST00000464764 RHOHQ15669 191 aa9.25□□□□□ -0.93
CLCNKA-204ENST00000464764 UTP20O75691 2785 aaKnown RBP9.25□□□□□ -0.93
CLCNKA-204ENST00000464764 POLQO75417 2590 aa9.25□□□□□ -0.93
CLCNKA-204ENST00000464764 IGHV1OR15-1A0A075B7D0 117 aa9.25□□□□□ -0.93
CLCNKA-204ENST00000464764 ICOSQ9Y6W8 199 aa9.25□□□□□ -0.93
CLCNKA-204ENST00000464764 IGHV4-61A0A0C4DH41 118 aa9.24□□□□□ -0.93
CLCNKA-204ENST00000464764 H3BMM0 161 aa9.24□□□□□ -0.93
CLCNKA-204ENST00000464764 IFITM1P13164 125 aa9.24□□□□□ -0.93
CLCNKA-204ENST00000464764 UBE2WQ96B02 151 aa9.24□□□□□ -0.93
CLCNKA-204ENST00000464764 NDUFA12Q9UI09 145 aa9.24□□□□□ -0.93
CLCNKA-204ENST00000464764 A0A0J9YX75 114 aa9.24□□□□□ -0.93
CLCNKA-204ENST00000464764 TRBV30A0A0K0K1B3 111 aa9.24□□□□□ -0.93
CLCNKA-204ENST00000464764 TLN2Q9Y4G6 2542 aa9.24□□□□□ -0.93
CLCNKA-204ENST00000464764 PTPN13Q12923 2485 aa9.23□□□□□ -0.93
CLCNKA-204ENST00000464764 USP9XQ93008 2570 aaPredicted RBP9.23□□□□□ -0.93
CLCNKA-204ENST00000464764 C19orf84I3L1E1 186 aa9.23□□□□□ -0.93
CLCNKA-204ENST00000464764 RBMY1A1P0DJD3 496 aaKnown RBP9.23□□□□□ -0.93
CLCNKA-204ENST00000464764 RBMY1CP0DJD4 496 aa9.23□□□□□ -0.93
CLCNKA-204ENST00000464764 RBMY1FQ15415 496 aaKnown RBP9.23□□□□□ -0.93
CLCNKA-204ENST00000464764 GAGE12JA6NER3 117 aa9.23□□□□□ -0.93
CLCNKA-204ENST00000464764 M0QXV9 152 aa9.23□□□□□ -0.93
CLCNKA-204ENST00000464764 GAGE7O76087 117 aa9.23□□□□□ -0.93
CLCNKA-204ENST00000464764 GAGE12FP0CL80 117 aa9.23□□□□□ -0.93
CLCNKA-204ENST00000464764 GAGE12GP0CL81 117 aa9.23□□□□□ -0.93
CLCNKA-204ENST00000464764 GAGE12IP0CL82 117 aa9.23□□□□□ -0.93
CLCNKA-204ENST00000464764 GAGE4Q13068 117 aa9.23□□□□□ -0.93
CLCNKA-204ENST00000464764 Q6ZSN1 163 aa9.23□□□□□ -0.93
CLCNKA-204ENST00000464764 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.22□□□□□ -0.93
CLCNKA-204ENST00000464764 IGKV2-29A2NJV5 120 aaPredicted RBP9.22□□□□□ -0.93
CLCNKA-204ENST00000464764 IGLV1-40P01703 118 aa9.22□□□□□ -0.93
CLCNKA-204ENST00000464764 IGHV3-38A0A0C4DH36 116 aa9.22□□□□□ -0.93
CLCNKA-204ENST00000464764 RPL13AP40429 203 aaKnown RBP9.22□□□□□ -0.93
CLCNKA-204ENST00000464764 ITPR1Q14643 2758 aa9.22□□□□□ -0.93
CLCNKA-204ENST00000464764 A6NDX4 124 aa9.21□□□□□ -0.93
CLCNKA-204ENST00000464764 HERV-K104P63124 156 aa9.21□□□□□ -0.93
CLCNKA-204ENST00000464764 ZNF625Q96I27 306 aaPredicted RBP9.21□□□□□ -0.93
CLCNKA-204ENST00000464764 IGHV1-58A0A0C4DH39 117 aa9.21□□□□□ -0.94
CLCNKA-204ENST00000464764 MXRA5Q9NR99 2828 aa9.21□□□□□ -0.94
CLCNKA-204ENST00000464764 MRPS36P82909 103 aaKnown RBP9.2□□□□□ -0.94
CLCNKA-204ENST00000464764 KLRB1Q12918 225 aa9.2□□□□□ -0.94
CLCNKA-204ENST00000464764 CHCHD5Q9BSY4 110 aa9.2□□□□□ -0.94
CLCNKA-204ENST00000464764 SYNJ2BPP57105 145 aa9.2□□□□□ -0.94
CLCNKA-204ENST00000464764 SHISA2Q6UWI4 295 aa9.2□□□□□ -0.94
CLCNKA-204ENST00000464764 VSIG2Q96IQ7 327 aa9.2□□□□□ -0.94
CLCNKA-204ENST00000464764 AVPP01185 164 aa9.19□□□□□ -0.94
CLCNKA-204ENST00000464764 SNRPD3P62318 126 aaKnown RBP9.19□□□□□ -0.94
CLCNKA-204ENST00000464764 FLNCQ14315 2725 aa9.19□□□□□ -0.94
CLCNKA-204ENST00000464764 SONP18583 2426 aaKnown RBP9.19□□□□□ -0.94
CLCNKA-204ENST00000464764 BRI3O95415 125 aa9.19□□□□□ -0.94
CLCNKA-204ENST00000464764 MIAQ16674 131 aa9.19□□□□□ -0.94
CLCNKA-204ENST00000464764 H3BUA1 57 aa9.18□□□□□ -0.94
CLCNKA-204ENST00000464764 K7EMT4 169 aa9.18□□□□□ -0.94
CLCNKA-204ENST00000464764 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.18□□□□□ -0.94
CLCNKA-204ENST00000464764 JMJD1CQ15652 2540 aa9.18□□□□□ -0.94
CLCNKA-204ENST00000464764 K7EQG2 157 aa9.18□□□□□ -0.94
CLCNKA-204ENST00000464764 TMEM61Q8N0U2 210 aa9.18□□□□□ -0.94
CLCNKA-204ENST00000464764 CDKN2A-AS1Q9UH64 79 aa9.18□□□□□ -0.94
CLCNKA-204ENST00000464764 TNFRSF18Q9Y5U5 241 aa9.18□□□□□ -0.94
CLCNKA-204ENST00000464764 COX6CP09669 75 aa9.17□□□□□ -0.94
CLCNKA-204ENST00000464764 CFHR3Q02985 330 aa9.17□□□□□ -0.94
CLCNKA-204ENST00000464764 MEIG1Q5JSS6 88 aa9.17□□□□□ -0.94
CLCNKA-204ENST00000464764 LINC00467Q9BRT7 94 aa9.17□□□□□ -0.94
CLCNKA-204ENST00000464764 TRGV11A0A075B6L2 103 aa9.17□□□□□ -0.94
CLCNKA-204ENST00000464764 LY6DQ14210 128 aa9.17□□□□□ -0.94
CLCNKA-204ENST00000464764 CHCHD7Q9BUK0 85 aa9.17□□□□□ -0.94
CLCNKA-204ENST00000464764 LST1O00453 97 aa9.16□□□□□ -0.94
CLCNKA-204ENST00000464764 SPANXDQ9BXN6 97 aa9.16□□□□□ -0.94
CLCNKA-204ENST00000464764 SPANXCQ9NY87 97 aa9.16□□□□□ -0.94
CLCNKA-204ENST00000464764 PYGO1Q9Y3Y4 419 aa9.16□□□□□ -0.94
CLCNKA-204ENST00000464764 CITED2Q99967 270 aaPredicted RBP9.16□□□□□ -0.94
CLCNKA-204ENST00000464764 PSMB8P28062 276 aa9.16□□□□□ -0.94
CLCNKA-204ENST00000464764 UBE2D4Q9Y2X8 147 aa9.16□□□□□ -0.94
CLCNKA-204ENST00000464764 COX6A2Q02221 97 aa9.15□□□□□ -0.94
CLCNKA-204ENST00000464764 HIST2H2BDQ6DRA6 164 aa9.15□□□□□ -0.94
CLCNKA-204ENST00000464764 AKAP9Q99996 3911 aa9.15□□□□□ -0.94
CLCNKA-204ENST00000464764 NDUFA7O95182 113 aa9.15□□□□□ -0.95
CLCNKA-204ENST00000464764 IGHV4-59P01825 116 aa9.15□□□□□ -0.95
CLCNKA-204ENST00000464764 Q6Q795 121 aa9.15□□□□□ -0.95
CLCNKA-204ENST00000464764 LINC01600Q96MT4 127 aa9.15□□□□□ -0.95
CLCNKA-204ENST00000464764 NIPBLQ6KC79 2804 aaeCLIP9.15□□□□□ -0.95
CLCNKA-204ENST00000464764 IGHV4-30-2A0A087WSY4 118 aa9.14□□□□□ -0.95
CLCNKA-204ENST00000464764 FBN2P35556 2912 aa9.14□□□□□ -0.95
CLCNKA-204ENST00000464764 TINCRA0A1B0GVN0 87 aa9.14□□□□□ -0.95
CLCNKA-204ENST00000464764 H3BT86 120 aa9.14□□□□□ -0.95
CLCNKA-204ENST00000464764 Q8N2B8 174 aa9.14□□□□□ -0.95
CLCNKA-204ENST00000464764 CACNA1AO00555 2505 aa9.14□□□□□ -0.95
CLCNKA-204ENST00000464764 RS1O15537 224 aa9.13□□□□□ -0.95
CLCNKA-204ENST00000464764 NBL1P41271 181 aa9.13□□□□□ -0.95
CLCNKA-204ENST00000464764 TMEM101Q96IK0 257 aa9.13□□□□□ -0.95
CLCNKA-204ENST00000464764 CFAP46Q8IYW2 2715 aa9.13□□□□□ -0.95
CLCNKA-204ENST00000464764 FAM208BQ5VWN6 2430 aa9.13□□□□□ -0.95
CLCNKA-204ENST00000464764 RBMY1BA6NDE4 496 aaKnown RBP9.12□□□□□ -0.95
CLCNKA-204ENST00000464764 RBMY1EA6NEQ0 496 aaKnown RBP9.12□□□□□ -0.95
CLCNKA-204ENST00000464764 RBMY1DP0C7P1 496 aaKnown RBP9.12□□□□□ -0.95
CLCNKA-204ENST00000464764 DEFB131AP59861 70 aa9.12□□□□□ -0.95
CLCNKA-204ENST00000464764 DEFB136Q30KP8 78 aa9.12□□□□□ -0.95
CLCNKA-204ENST00000464764 Q9H8V8 135 aa9.12□□□□□ -0.95
CLCNKA-204ENST00000464764 ACACBO00763 2458 aa9.12□□□□□ -0.95
CLCNKA-204ENST00000464764 PIMREGQ9BSJ6 248 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms