RNA–Protein interactions for RNA: ENST00000464001.1

ITGB1-208, Transcript of integrin subunit beta 1, humanhuman

TSL 2

Gene ITGB1, Length 316 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-208ENST00000464001 CEP162Q5TB80 1403 aa1.81□□□□□ -2.12
ITGB1-208ENST00000464001 MYO7BQ6PIF6 2116 aa1.81□□□□□ -2.12
ITGB1-208ENST00000464001 TET1Q8NFU7 2136 aa1.81□□□□□ -2.12
ITGB1-208ENST00000464001 ERICH3Q5RHP9 1530 aa1.81□□□□□ -2.12
ITGB1-208ENST00000464001 ZC3H13Q5T200 1668 aaKnown RBP1.8□□□□□ -2.12
ITGB1-208ENST00000464001 PEAK1Q9H792 1746 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 TRAV23DV6A0A075B6W5 121 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 TRBV6-5A0A0K0K1A5 114 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 CLPSL1A2RUU4 121 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 IGHV3-30P01768 117 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 APOC3P02656 99 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 IGHV3-30-5P0DP03 117 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 C10orf128Q5T292 105 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 ALKAL2Q6UX46 152 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 ZNF818PQ6ZRF7 136 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 CYP2G1PQ6ZSU1 146 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 ZNF720Q7Z2F6 126 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 MANBALQ9NQG1 85 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 INTS1Q8N201 2190 aaKnown RBP1.8□□□□□ -2.12
ITGB1-208ENST00000464001 ABCA4P78363 2273 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 ICE1Q9Y2F5 2266 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 MLH3Q9UHC1 1453 aa1.8□□□□□ -2.12
ITGB1-208ENST00000464001 TRBV7-3A0A075B6L6 115 aa1.79□□□□□ -2.12
ITGB1-208ENST00000464001 LOC101927531A0A1B0GV80 90 aa1.79□□□□□ -2.12
ITGB1-208ENST00000464001 IL9P15248 144 aa1.79□□□□□ -2.12
ITGB1-208ENST00000464001 MPV17LQ2QL34 196 aa1.79□□□□□ -2.12
ITGB1-208ENST00000464001 SERP2Q8N6R1 65 aa1.79□□□□□ -2.12
ITGB1-208ENST00000464001 S100A16Q96FQ6 103 aaKnown RBP1.79□□□□□ -2.12
ITGB1-208ENST00000464001 AMELYQ99218 206 aa1.79□□□□□ -2.12
ITGB1-208ENST00000464001 CACFD1Q9UGQ2 172 aa1.79□□□□□ -2.12
ITGB1-208ENST00000464001 MYOM1P52179 1685 aa1.79□□□□□ -2.12
ITGB1-208ENST00000464001 KDM3BQ7LBC6 1761 aa1.78□□□□□ -2.12
ITGB1-208ENST00000464001 LRRC37A3O60309 1634 aa1.78□□□□□ -2.12
ITGB1-208ENST00000464001 ADAMTS12P58397 1594 aa1.78□□□□□ -2.12
ITGB1-208ENST00000464001 CCDC88BA6NC98 1476 aa1.78□□□□□ -2.12
ITGB1-208ENST00000464001 IGLC7A0M8Q6 106 aa1.78□□□□□ -2.12
ITGB1-208ENST00000464001 SYS1-DBNDD2H3BUS1 97 aa1.78□□□□□ -2.12
ITGB1-208ENST00000464001 RPL37AP61513 92 aaKnown RBP1.78□□□□□ -2.12
ITGB1-208ENST00000464001 Q5VV11 94 aa1.78□□□□□ -2.12
ITGB1-208ENST00000464001 SFTA2Q6UW10 78 aa1.78□□□□□ -2.12
ITGB1-208ENST00000464001 C20orf197Q8N268 126 aa1.78□□□□□ -2.12
ITGB1-208ENST00000464001 TRGV9Q99603 122 aa1.78□□□□□ -2.12
ITGB1-208ENST00000464001 MGST2Q99735 147 aa1.78□□□□□ -2.12
ITGB1-208ENST00000464001 PRRC2BQ5JSZ5 2229 aaKnown RBP1.78□□□□□ -2.13
ITGB1-208ENST00000464001 ZNF236Q9UL36 1845 aa1.77□□□□□ -2.13
ITGB1-208ENST00000464001 IQGAP3Q86VI3 1631 aa1.77□□□□□ -2.13
ITGB1-208ENST00000464001 POLA1P09884 1462 aaPredicted RBP1.77□□□□□ -2.13
ITGB1-208ENST00000464001 TRAV22A0A0B4J277 110 aa1.77□□□□□ -2.13
ITGB1-208ENST00000464001 A0A0G2JND7 137 aa1.77□□□□□ -2.13
ITGB1-208ENST00000464001 HIGD1CA8MV81 97 aa1.77□□□□□ -2.13
ITGB1-208ENST00000464001 UBE2D3P61077 147 aa1.77□□□□□ -2.13
ITGB1-208ENST00000464001 UBE2D2P62837 147 aa1.77□□□□□ -2.13
ITGB1-208ENST00000464001 C6orf52Q5T4I8 152 aa1.77□□□□□ -2.13
ITGB1-208ENST00000464001 Q8N6K4 173 aa1.77□□□□□ -2.13
ITGB1-208ENST00000464001 S100A13Q99584 98 aa1.77□□□□□ -2.13
ITGB1-208ENST00000464001 BPESC1Q9GZL8 116 aa1.77□□□□□ -2.13
ITGB1-208ENST00000464001 IGKV3D-7A0A0C4DH55 119 aa1.76□□□□□ -2.13
ITGB1-208ENST00000464001 IGKV3OR2-268A0A0C4DH90 116 aa1.76□□□□□ -2.13
ITGB1-208ENST00000464001 NBDYA0A0U1RRE5 68 aa1.76□□□□□ -2.13
ITGB1-208ENST00000464001 ZNF56Q15929 161 aa1.76□□□□□ -2.13
ITGB1-208ENST00000464001 LINC00322Q6ZN03 302 aaPredicted RBP1.76□□□□□ -2.13
ITGB1-208ENST00000464001 ZNF625Q96I27 306 aaPredicted RBP1.76□□□□□ -2.13
ITGB1-208ENST00000464001 FAM167A-AS1Q96KT0 104 aa1.76□□□□□ -2.13
ITGB1-208ENST00000464001 NXT2Q9NPJ8 142 aaKnown RBP1.76□□□□□ -2.13
ITGB1-208ENST00000464001 MED9Q9NWA0 146 aa1.76□□□□□ -2.13
ITGB1-208ENST00000464001 TMEM14CQ9P0S9 112 aa1.76□□□□□ -2.13
ITGB1-208ENST00000464001 UQCR10Q9UDW1 63 aa1.76□□□□□ -2.13
ITGB1-208ENST00000464001 MYO5CQ9NQX4 1742 aa1.76□□□□□ -2.13
ITGB1-208ENST00000464001 E9PCH4 1651 aa1.76□□□□□ -2.13
ITGB1-208ENST00000464001 KIF21AQ7Z4S6 1674 aa1.76□□□□□ -2.13
ITGB1-208ENST00000464001 UNC13BO14795 1591 aa1.76□□□□□ -2.13
ITGB1-208ENST00000464001 DIP2CQ9Y2E4 1556 aa1.76□□□□□ -2.13
ITGB1-208ENST00000464001 ANKRD36A6QL64 1941 aa1.76□□□□□ -2.13
ITGB1-208ENST00000464001 FANCAO15360 1455 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 ATP10BO94823 1461 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 CCDC141Q6ZP82 1450 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 EDC4Q6P2E9 1401 aaKnown RBP1.75□□□□□ -2.13
ITGB1-208ENST00000464001 SPAG17Q6Q759 2223 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 RGPD8O14715 1765 aaPredicted RBP1.75□□□□□ -2.13
ITGB1-208ENST00000464001 RGPD5Q99666 1765 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 ARFGEF2Q9Y6D5 1785 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 PLIN4Q96Q06 1357 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 NUP188Q5SRE5 1749 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 TRBV6-7A0A0A0MS04 114 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 CHKB-CPT1BH3BT56 60 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 H7BZZ5 65 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 INE1O15225 51 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 NDUFC1O43677 76 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 EDDM3BP56851 147 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 SSBP1Q04837 148 aaKnown RBP1.75□□□□□ -2.13
ITGB1-208ENST00000464001 NDUFA4L2Q9NRX3 87 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 HIGD1BQ9P298 99 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 PRO1854Q9UHT4 67 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 TMEM131LA2VDJ0 1609 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 ADGRB2O60241 1585 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 MAP2P11137 1827 aaKnown RBP1.75□□□□□ -2.13
ITGB1-208ENST00000464001 RGPD2P0DJD1 1756 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 SCN11AQ9UI33 1791 aa1.75□□□□□ -2.13
ITGB1-208ENST00000464001 IGKV2-29A2NJV5 120 aaPredicted RBP1.74□□□□□ -2.13
ITGB1-208ENST00000464001 HCRTO43612 131 aa1.74□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms