RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 AMTP48728 403 aa10.81□□□□□ -0.68
HMGN1-209ENST00000463631 KRTAP10-8P60410 259 aa10.81□□□□□ -0.68
HMGN1-209ENST00000463631 RPS20P60866 119 aaKnown RBP10.81□□□□□ -0.68
HMGN1-209ENST00000463631 FAM213BQ8TBF2 198 aa10.81□□□□□ -0.68
HMGN1-209ENST00000463631 GTSF1Q8WW33 167 aa10.81□□□□□ -0.68
HMGN1-209ENST00000463631 TPPP3Q9BW30 176 aa10.81□□□□□ -0.68
HMGN1-209ENST00000463631 IGKV2-24A0A0C4DH68 120 aa10.8□□□□□ -0.68
HMGN1-209ENST00000463631 COTL1Q14019 142 aa10.8□□□□□ -0.68
HMGN1-209ENST00000463631 ODF1Q14990 250 aa10.8□□□□□ -0.68
HMGN1-209ENST00000463631 STPG4Q8N801 248 aa10.8□□□□□ -0.68
HMGN1-209ENST00000463631 C11orf52Q96A22 123 aa10.8□□□□□ -0.68
HMGN1-209ENST00000463631 A0A1B0GV50 99 aa10.79□□□□□ -0.68
HMGN1-209ENST00000463631 F2Z2F3 143 aa10.79□□□□□ -0.68
HMGN1-209ENST00000463631 TRGC1P0CF51 173 aa10.79□□□□□ -0.68
HMGN1-209ENST00000463631 REG3GQ6UW15 175 aa10.79□□□□□ -0.68
HMGN1-209ENST00000463631 SPINK6Q6UWN8 80 aa10.79□□□□□ -0.68
HMGN1-209ENST00000463631 KCNRGQ8N5I3 272 aa10.79□□□□□ -0.68
HMGN1-209ENST00000463631 OR2D3Q8NGH3 330 aa10.79□□□□□ -0.68
HMGN1-209ENST00000463631 A0A096LNI7 61 aa10.78□□□□□ -0.68
HMGN1-209ENST00000463631 C19orf71A6NCJ1 209 aa10.78□□□□□ -0.68
HMGN1-209ENST00000463631 ZNF345Q14585 488 aa10.78□□□□□ -0.68
HMGN1-209ENST00000463631 HIGD2BQ4VC39 106 aa10.78□□□□□ -0.68
HMGN1-209ENST00000463631 KRTAP3-3Q9BYR6 98 aa10.78□□□□□ -0.68
HMGN1-209ENST00000463631 KRTAP3-2Q9BYR7 98 aa10.78□□□□□ -0.68
HMGN1-209ENST00000463631 LINC00474Q9P2X8 69 aa10.78□□□□□ -0.68
HMGN1-209ENST00000463631 CENPWQ5EE01 88 aa10.77□□□□□ -0.69
HMGN1-209ENST00000463631 CHCHD10Q8WYQ3 142 aaPredicted RBP10.77□□□□□ -0.69
HMGN1-209ENST00000463631 SMIM12Q96EX1 92 aa10.77□□□□□ -0.69
HMGN1-209ENST00000463631 PKIGQ9Y2B9 76 aa10.77□□□□□ -0.69
HMGN1-209ENST00000463631 XKRY2A2RUG3 117 aa10.76□□□□□ -0.69
HMGN1-209ENST00000463631 H2AFB1P0C5Y9 115 aa10.76□□□□□ -0.69
HMGN1-209ENST00000463631 CTRLP40313 264 aa10.75□□□□□ -0.69
HMGN1-209ENST00000463631 LYPD6BQ8NI32 183 aa10.75□□□□□ -0.69
HMGN1-209ENST00000463631 MANBALQ9NQG1 85 aa10.75□□□□□ -0.69
HMGN1-209ENST00000463631 IGKV3OR2-268A0A0C4DH90 116 aa10.74□□□□□ -0.69
HMGN1-209ENST00000463631 H7C423 109 aa10.74□□□□□ -0.69
HMGN1-209ENST00000463631 NTF3P20783 257 aa10.74□□□□□ -0.69
HMGN1-209ENST00000463631 SRSF9Q13242 221 aaKnown RBP eCLIP10.74□□□□□ -0.69
HMGN1-209ENST00000463631 LYZL1Q6UWQ5 148 aa10.74□□□□□ -0.69
HMGN1-209ENST00000463631 CNFNQ9BYD5 112 aa10.74□□□□□ -0.69
HMGN1-209ENST00000463631 NCR2O95944 276 aa10.73□□□□□ -0.69
HMGN1-209ENST00000463631 IFNA1P01562 189 aa10.73□□□□□ -0.69
HMGN1-209ENST00000463631 FOXI1Q12951 378 aa10.73□□□□□ -0.69
HMGN1-209ENST00000463631 AMMECR1LQ6DCA0 310 aa10.73□□□□□ -0.69
HMGN1-209ENST00000463631 C9orf62Q8N4C0 152 aa10.73□□□□□ -0.69
HMGN1-209ENST00000463631 GNG4P50150 75 aa10.72□□□□□ -0.69
HMGN1-209ENST00000463631 CCL20P78556 96 aa10.72□□□□□ -0.69
HMGN1-209ENST00000463631 Q6ZRP5 223 aa10.72□□□□□ -0.69
HMGN1-209ENST00000463631 TRAV1-1A0A0B4J248 108 aa10.71□□□□□ -0.69
HMGN1-209ENST00000463631 Q6ZNX1 250 aa10.71□□□□□ -0.69
HMGN1-209ENST00000463631 GATD1Q8NB37 220 aa10.71□□□□□ -0.69
HMGN1-209ENST00000463631 GNG13Q9P2W3 67 aa10.71□□□□□ -0.69
HMGN1-209ENST00000463631 TRBV20OR9-2A0A075B6H5 130 aa10.7□□□□□ -0.7
HMGN1-209ENST00000463631 FGF6P10767 208 aa10.7□□□□□ -0.7
HMGN1-209ENST00000463631 ZNF25P17030 456 aaPredicted RBP10.7□□□□□ -0.7
HMGN1-209ENST00000463631 HMSDA8MTL9 139 aa10.69□□□□□ -0.7
HMGN1-209ENST00000463631 SMLR1H3BR10 107 aa10.69□□□□□ -0.7
HMGN1-209ENST00000463631 BCL2L11O43521 198 aa10.69□□□□□ -0.7
HMGN1-209ENST00000463631 APCSP02743 223 aa10.69□□□□□ -0.7
HMGN1-209ENST00000463631 RNASEKQ6P5S7 137 aaKnown RBP10.69□□□□□ -0.7
HMGN1-209ENST00000463631 OR5A1Q8NGJ0 315 aa10.69□□□□□ -0.7
HMGN1-209ENST00000463631 CARD19Q96LW7 228 aa10.69□□□□□ -0.7
HMGN1-209ENST00000463631 BIN3Q9NQY0 253 aa10.69□□□□□ -0.7
HMGN1-209ENST00000463631 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-209ENST00000463631 TRAV26-2A0A0B4J265 109 aa10.68□□□□□ -0.7
HMGN1-209ENST00000463631 IGHV1-58A0A0C4DH39 117 aa10.68□□□□□ -0.7
HMGN1-209ENST00000463631 IGKV2-29A2NJV5 120 aaPredicted RBP10.68□□□□□ -0.7
HMGN1-209ENST00000463631 RAB19A4D1S5 217 aa10.68□□□□□ -0.7
HMGN1-209ENST00000463631 GAS8-AS1O95177 125 aa10.68□□□□□ -0.7
HMGN1-209ENST00000463631 KANTRA0A1W2PQU2 76 aa10.67□□□□□ -0.7
HMGN1-209ENST00000463631 PDE6DO43924 150 aa10.67□□□□□ -0.7
HMGN1-209ENST00000463631 XCL1P47992 114 aa10.67□□□□□ -0.7
HMGN1-209ENST00000463631 EIF5AP63241 154 aaKnown RBP10.67□□□□□ -0.7
HMGN1-209ENST00000463631 MEF2BQ02080 365 aaPredicted RBP10.67□□□□□ -0.7
HMGN1-209ENST00000463631 TWIST1Q15672 202 aa10.67□□□□□ -0.7
HMGN1-209ENST00000463631 RPL39LQ96EH5 51 aaKnown RBP10.67□□□□□ -0.7
HMGN1-209ENST00000463631 SDHAF1A6NFY7 115 aa10.66□□□□□ -0.7
HMGN1-209ENST00000463631 TEX261Q6UWH6 196 aa10.66□□□□□ -0.7
HMGN1-209ENST00000463631 LINC00959A0A1B0GUT2 108 aa10.65□□□□□ -0.7
HMGN1-209ENST00000463631 CCL25O15444 150 aa10.65□□□□□ -0.7
HMGN1-209ENST00000463631 SYCNQ0VAF6 134 aa10.65□□□□□ -0.7
HMGN1-209ENST00000463631 NUDT10Q8NFP7 164 aa10.65□□□□□ -0.7
HMGN1-209ENST00000463631 LINC00526Q96FQ7 95 aa10.65□□□□□ -0.7
HMGN1-209ENST00000463631 NUDT11Q96G61 164 aa10.65□□□□□ -0.7
HMGN1-209ENST00000463631 BATF3Q9NR55 127 aa10.65□□□□□ -0.7
HMGN1-209ENST00000463631 PTTG1IPP53801 180 aa10.64□□□□□ -0.71
HMGN1-209ENST00000463631 BTF3L4Q96K17 158 aa10.64□□□□□ -0.71
HMGN1-209ENST00000463631 TRBV6-5A0A0K0K1A5 114 aa10.63□□□□□ -0.71
HMGN1-209ENST00000463631 FAM231BA6NCW3 169 aa10.63□□□□□ -0.71
HMGN1-209ENST00000463631 TEX46H3BTG2 121 aa10.63□□□□□ -0.71
HMGN1-209ENST00000463631 TMEM101Q96IK0 257 aa10.63□□□□□ -0.71
HMGN1-209ENST00000463631 FAM210AQ96ND0 272 aa10.63□□□□□ -0.71
HMGN1-209ENST00000463631 RPP21Q9H633 154 aaKnown RBP10.63□□□□□ -0.71
HMGN1-209ENST00000463631 I3L3M4 83 aa10.62□□□□□ -0.71
HMGN1-209ENST00000463631 ZNF561-AS1K7EIQ3 104 aa10.62□□□□□ -0.71
HMGN1-209ENST00000463631 ESDP10768 282 aa10.62□□□□□ -0.71
HMGN1-209ENST00000463631 CD164L2Q6UWJ8 174 aa10.62□□□□□ -0.71
HMGN1-209ENST00000463631 MED9Q9NWA0 146 aa10.62□□□□□ -0.71
HMGN1-209ENST00000463631 LOC107984640A0A0U1RRK4 108 aa10.61□□□□□ -0.71
HMGN1-209ENST00000463631 CAMPP49913 170 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 142.9 ms