RNA–Protein interactions for RNA: ENST00000463599.5

U2AF1-205, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-205ENST00000463599 PRH1P02810 166 aa2.8□□□□□ -1.96
U2AF1-205ENST00000463599 EFNA4P52798 201 aa2.8□□□□□ -1.96
U2AF1-205ENST00000463599 DEFB121Q5J5C9 76 aa2.8□□□□□ -1.96
U2AF1-205ENST00000463599 IFI27L1Q96BM0 104 aa2.8□□□□□ -1.96
U2AF1-205ENST00000463599 NMES1Q9C002 83 aa2.8□□□□□ -1.96
U2AF1-205ENST00000463599 TIMM9Q9Y5J7 89 aa2.8□□□□□ -1.96
U2AF1-205ENST00000463599 HILPDAQ9Y5L2 63 aa2.8□□□□□ -1.96
U2AF1-205ENST00000463599 SDK2Q58EX2 2172 aa2.79□□□□□ -1.96
U2AF1-205ENST00000463599 PLXNB1O43157 2135 aa2.79□□□□□ -1.96
U2AF1-205ENST00000463599 CCL5P13501 91 aa2.79□□□□□ -1.96
U2AF1-205ENST00000463599 SUPT4H1P63272 117 aaKnown RBP2.79□□□□□ -1.96
U2AF1-205ENST00000463599 MED12LQ86YW9 2145 aa2.79□□□□□ -1.96
U2AF1-205ENST00000463599 LINC00474Q9P2X8 69 aa2.79□□□□□ -1.96
U2AF1-205ENST00000463599 PRO1854Q9UHT4 67 aa2.79□□□□□ -1.96
U2AF1-205ENST00000463599 TNS1Q9HBL0 1735 aaKnown RBP2.79□□□□□ -1.96
U2AF1-205ENST00000463599 ALS2Q96Q42 1657 aa2.79□□□□□ -1.96
U2AF1-205ENST00000463599 ARHGEF5Q12774 1597 aa2.78□□□□□ -1.96
U2AF1-205ENST00000463599 TRBV7-1A0A0A6YYK4 115 aa2.78□□□□□ -1.96
U2AF1-205ENST00000463599 MYMXA0A1B0GTQ4 84 aa2.78□□□□□ -1.96
U2AF1-205ENST00000463599 H3BVH4 76 aa2.78□□□□□ -1.96
U2AF1-205ENST00000463599 H7BZZ5 65 aa2.78□□□□□ -1.96
U2AF1-205ENST00000463599 COX6CP09669 75 aa2.78□□□□□ -1.96
U2AF1-205ENST00000463599 RPL28P46779 137 aaKnown RBP2.78□□□□□ -1.96
U2AF1-205ENST00000463599 FXYD2P54710 66 aa2.78□□□□□ -1.96
U2AF1-205ENST00000463599 DSCR4P56555 118 aaPredicted RBP2.78□□□□□ -1.96
U2AF1-205ENST00000463599 ERHP84090 104 aaKnown RBP2.78□□□□□ -1.96
U2AF1-205ENST00000463599 SSBP1Q04837 148 aaKnown RBP2.78□□□□□ -1.96
U2AF1-205ENST00000463599 CASC2Q6XLA1 102 aa2.78□□□□□ -1.96
U2AF1-205ENST00000463599 VMO1Q7Z5L0 202 aa2.78□□□□□ -1.96
U2AF1-205ENST00000463599 DYNAPQ8N1N2 210 aa2.78□□□□□ -1.96
U2AF1-205ENST00000463599 SPTSSBQ8NFR3 76 aa2.78□□□□□ -1.96
U2AF1-205ENST00000463599 SMIM4Q8WVI0 70 aa2.78□□□□□ -1.96
U2AF1-205ENST00000463599 PPP1R1CQ8WVI7 109 aa2.78□□□□□ -1.96
U2AF1-205ENST00000463599 COL5A3P25940 1745 aaPredicted RBP2.78□□□□□ -1.96
U2AF1-205ENST00000463599 PTPRMP28827 1452 aa2.77□□□□□ -1.97
U2AF1-205ENST00000463599 SNRNP200O75643 2136 aaKnown RBP2.77□□□□□ -1.97
U2AF1-205ENST00000463599 NUMA1Q14980 2115 aa2.77□□□□□ -1.97
U2AF1-205ENST00000463599 COL4A2P08572 1712 aa2.77□□□□□ -1.97
U2AF1-205ENST00000463599 NUP188Q5SRE5 1749 aa2.77□□□□□ -1.97
U2AF1-205ENST00000463599 USP54Q70EL1 1684 aa2.77□□□□□ -1.97
U2AF1-205ENST00000463599 CEBPZOSA8MTT3 80 aa2.77□□□□□ -1.97
U2AF1-205ENST00000463599 HMGN2P05204 90 aaKnown RBP2.77□□□□□ -1.97
U2AF1-205ENST00000463599 C9orf116Q5BN46 136 aaPredicted RBP2.77□□□□□ -1.97
U2AF1-205ENST00000463599 ZNF818PQ6ZRF7 136 aa2.77□□□□□ -1.97
U2AF1-205ENST00000463599 ZCCHC13Q8WW36 166 aaKnown RBP2.77□□□□□ -1.97
U2AF1-205ENST00000463599 LIMD2Q9BT23 127 aa2.77□□□□□ -1.97
U2AF1-205ENST00000463599 C14orf132Q9NPU4 83 aa2.77□□□□□ -1.97
U2AF1-205ENST00000463599 PRO2289Q9P1D8 64 aa2.77□□□□□ -1.97
U2AF1-205ENST00000463599 KIAA2026Q5HYC2 2103 aa2.77□□□□□ -1.97
U2AF1-205ENST00000463599 ANKRD36CQ5JPF3 1778 aa2.77□□□□□ -1.97
U2AF1-205ENST00000463599 TRBV7-3A0A075B6L6 115 aa2.76□□□□□ -1.97
U2AF1-205ENST00000463599 IGHV3-64A0A075B6Q5 118 aa2.76□□□□□ -1.97
U2AF1-205ENST00000463599 TRAV7A0A075B6U4 112 aa2.76□□□□□ -1.97
U2AF1-205ENST00000463599 C2orf70A6NJV1 201 aa2.76□□□□□ -1.97
U2AF1-205ENST00000463599 HCG22E2RYF7 251 aa2.76□□□□□ -1.97
U2AF1-205ENST00000463599 CRPP02741 224 aa2.76□□□□□ -1.97
U2AF1-205ENST00000463599 UBE2D3P61077 147 aa2.76□□□□□ -1.97
U2AF1-205ENST00000463599 UBE2D2P62837 147 aa2.76□□□□□ -1.97
U2AF1-205ENST00000463599 PLGLAQ15195 96 aa2.76□□□□□ -1.97
U2AF1-205ENST00000463599 ATXN8Q156A1 80 aa2.76□□□□□ -1.97
U2AF1-205ENST00000463599 ATP5EP2Q5VTU8 51 aa2.76□□□□□ -1.97
U2AF1-205ENST00000463599 Q8N814 137 aa2.76□□□□□ -1.97
U2AF1-205ENST00000463599 FAM167A-AS1Q96KT0 104 aa2.76□□□□□ -1.97
U2AF1-205ENST00000463599 ABRACLQ9P1F3 81 aa2.76□□□□□ -1.97
U2AF1-205ENST00000463599 PLCH1Q4KWH8 1693 aa2.76□□□□□ -1.97
U2AF1-205ENST00000463599 STRCP1A6NGW2 1772 aa2.75□□□□□ -1.97
U2AF1-205ENST00000463599 TRBV25-1A0A075B6N4 114 aa2.75□□□□□ -1.97
U2AF1-205ENST00000463599 IGKV2D-26A0A0A0MRZ7 120 aa2.75□□□□□ -1.97
U2AF1-205ENST00000463599 TRBV10-2A0A0K0K1G8 114 aa2.75□□□□□ -1.97
U2AF1-205ENST00000463599 ZNF815PA8K554 130 aa2.75□□□□□ -1.97
U2AF1-205ENST00000463599 IQCF6A8MYZ5 107 aa2.75□□□□□ -1.97
U2AF1-205ENST00000463599 LEPROTL1O95214 131 aa2.75□□□□□ -1.97
U2AF1-205ENST00000463599 IFI27P40305 119 aaPredicted RBP2.75□□□□□ -1.97
U2AF1-205ENST00000463599 EDDM3BP56851 147 aa2.75□□□□□ -1.97
U2AF1-205ENST00000463599 LYPD5Q6UWN5 251 aa2.75□□□□□ -1.97
U2AF1-205ENST00000463599 ZNF826PQ6ZT77 177 aa2.75□□□□□ -1.97
U2AF1-205ENST00000463599 C20orf197Q8N268 126 aa2.75□□□□□ -1.97
U2AF1-205ENST00000463599 Q8N6K4 173 aa2.75□□□□□ -1.97
U2AF1-205ENST00000463599 TXNDC17Q9BRA2 123 aa2.75□□□□□ -1.97
U2AF1-205ENST00000463599 CDC42SE1Q9NRR8 79 aa2.75□□□□□ -1.97
U2AF1-205ENST00000463599 MRC1P22897 1456 aa2.75□□□□□ -1.97
U2AF1-205ENST00000463599 CICQ96RK0 1608 aaPredicted RBP2.75□□□□□ -1.97
U2AF1-205ENST00000463599 CDC42BPGQ6DT37 1551 aa2.74□□□□□ -1.97
U2AF1-205ENST00000463599 MROH2BQ7Z745 1585 aa2.74□□□□□ -1.97
U2AF1-205ENST00000463599 AGLP35573 1532 aa2.74□□□□□ -1.97
U2AF1-205ENST00000463599 NEXMIFQ5QGS0 1516 aa2.74□□□□□ -1.97
U2AF1-205ENST00000463599 H7C2G1 150 aa2.74□□□□□ -1.97
U2AF1-205ENST00000463599 Q6JHZ5 121 aa2.74□□□□□ -1.97
U2AF1-205ENST00000463599 Q6ZTI0 123 aa2.74□□□□□ -1.97
U2AF1-205ENST00000463599 NDUFA11Q86Y39 141 aa2.74□□□□□ -1.97
U2AF1-205ENST00000463599 FAM223AQ8IWN6 122 aa2.74□□□□□ -1.97
U2AF1-205ENST00000463599 TTTY12Q9BZ98 90 aa2.74□□□□□ -1.97
U2AF1-205ENST00000463599 CYSTM1Q9H1C7 97 aa2.74□□□□□ -1.97
U2AF1-205ENST00000463599 TSC2P49815 1807 aa2.74□□□□□ -1.97
U2AF1-205ENST00000463599 KDM6BO15054 1643 aa2.74□□□□□ -1.97
U2AF1-205ENST00000463599 UBR1Q8IWV7 1749 aa2.73□□□□□ -1.97
U2AF1-205ENST00000463599 ATP7AQ04656 1500 aa2.73□□□□□ -1.97
U2AF1-205ENST00000463599 TMSB15BA0A087X1C1 80 aa2.73□□□□□ -1.97
U2AF1-205ENST00000463599 H3BRN7 92 aa2.73□□□□□ -1.97
U2AF1-205ENST00000463599 ERC2-IT1O76042 136 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms