RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 TRBV6-8A0A0A6YYG3 113 aa6.76□□□□□ -1.33
BRCA1-205ENST00000461221 TRBV6-4A0A1B0GX49 114 aa6.76□□□□□ -1.33
BRCA1-205ENST00000461221 ZNF80P51504 273 aaPredicted RBP6.76□□□□□ -1.33
BRCA1-205ENST00000461221 LRRC75A-AS1Q8N1F1 130 aa6.76□□□□□ -1.33
BRCA1-205ENST00000461221 KIAA1671Q9BY89 1806 aa6.76□□□□□ -1.33
BRCA1-205ENST00000461221 C3orf84H3BNL1 204 aa6.76□□□□□ -1.33
BRCA1-205ENST00000461221 WFDC13Q8IUB5 93 aa6.75□□□□□ -1.33
BRCA1-205ENST00000461221 TCF20Q9UGU0 1960 aaKnown RBP6.75□□□□□ -1.33
BRCA1-205ENST00000461221 TRBV27A0A0K0K1C4 114 aa6.75□□□□□ -1.33
BRCA1-205ENST00000461221 K7EQG2 157 aa6.75□□□□□ -1.33
BRCA1-205ENST00000461221 SPTBN2O15020 2390 aa6.75□□□□□ -1.33
BRCA1-205ENST00000461221 E7EUB6 86 aa6.75□□□□□ -1.33
BRCA1-205ENST00000461221 USF3Q68DE3 2245 aa6.75□□□□□ -1.33
BRCA1-205ENST00000461221 SPINK6Q6UWN8 80 aa6.75□□□□□ -1.33
BRCA1-205ENST00000461221 NCOR1O75376 2440 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 LINC01548A6NM66 108 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 IGLV2-14P01704 120 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 NRGNQ92686 78 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 LY6LH3BQJ8 138 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 UBE2D3P61077 147 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 C1orf195Q5TG92 126 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 C20orf173Q96LM9 149 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 WDR81Q562E7 1941 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 TRAV10A0A0B4J240 114 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 ODF3BA8MYP8 253 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 FRMD6-AS1P0C7T7 363 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 DEFB114Q30KQ6 69 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 XAGE1AQ9HD64 81 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 DOCK8Q8NF50 2099 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 MRPS36P82909 103 aaKnown RBP6.74□□□□□ -1.33
BRCA1-205ENST00000461221 FBXL19-AS1Q494R0 122 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 SNURFQ9Y675 71 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 CFAP126Q5VTH2 177 aa6.74□□□□□ -1.33
BRCA1-205ENST00000461221 IGF1P05019 195 aa6.73□□□□□ -1.33
BRCA1-205ENST00000461221 PYGO1Q9Y3Y4 419 aa6.73□□□□□ -1.33
BRCA1-205ENST00000461221 THSD7BQ9C0I4 1608 aa6.73□□□□□ -1.33
BRCA1-205ENST00000461221 IGLV4-69A0A075B6H9 119 aa6.73□□□□□ -1.33
BRCA1-205ENST00000461221 LOC107984640A0A0U1RRK4 108 aa6.73□□□□□ -1.33
BRCA1-205ENST00000461221 FNDC1Q4ZHG4 1894 aaPredicted RBP6.73□□□□□ -1.33
BRCA1-205ENST00000461221 MRPS12O15235 138 aaKnown RBP6.73□□□□□ -1.33
BRCA1-205ENST00000461221 IGLV2-8P01709 118 aa6.73□□□□□ -1.33
BRCA1-205ENST00000461221 Q6YL49 198 aa6.73□□□□□ -1.33
BRCA1-205ENST00000461221 MUC7Q8TAX7 377 aa6.73□□□□□ -1.33
BRCA1-205ENST00000461221 PLXNA2O75051 1894 aa6.73□□□□□ -1.33
BRCA1-205ENST00000461221 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.72□□□□□ -1.33
BRCA1-205ENST00000461221 COX7CP15954 63 aa6.72□□□□□ -1.33
BRCA1-205ENST00000461221 TRBV6-5A0A0K0K1A5 114 aa6.72□□□□□ -1.33
BRCA1-205ENST00000461221 CD164L2Q6UWJ8 174 aa6.72□□□□□ -1.33
BRCA1-205ENST00000461221 DCANP1Q8TF63 244 aa6.72□□□□□ -1.33
BRCA1-205ENST00000461221 COL4A6Q14031 1691 aa6.72□□□□□ -1.33
BRCA1-205ENST00000461221 VWA8A3KMH1 1905 aa6.72□□□□□ -1.33
BRCA1-205ENST00000461221 C11orf1Q9H5F2 150 aa6.72□□□□□ -1.33
BRCA1-205ENST00000461221 TSC2P49815 1807 aa6.72□□□□□ -1.33
BRCA1-205ENST00000461221 Q6ZQY7 126 aa6.72□□□□□ -1.33
BRCA1-205ENST00000461221 M0QY20 66 aa6.72□□□□□ -1.33
BRCA1-205ENST00000461221 UBE2D2P62837 147 aa6.72□□□□□ -1.33
BRCA1-205ENST00000461221 ZFAND3Q9H8U3 227 aa6.72□□□□□ -1.33
BRCA1-205ENST00000461221 COL6A6A6NMZ7 2263 aa6.71□□□□□ -1.33
BRCA1-205ENST00000461221 SHISA2Q6UWI4 295 aa6.71□□□□□ -1.33
BRCA1-205ENST00000461221 LINC00474Q9P2X8 69 aa6.71□□□□□ -1.33
BRCA1-205ENST00000461221 CACNA1BQ00975 2339 aa6.71□□□□□ -1.34
BRCA1-205ENST00000461221 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.71□□□□□ -1.34
BRCA1-205ENST00000461221 PPDPFQ9H3Y8 114 aa6.71□□□□□ -1.34
BRCA1-205ENST00000461221 TP73-AS1Q9UF72 201 aa6.71□□□□□ -1.34
BRCA1-205ENST00000461221 IGKV2-28A0A075B6P5 120 aa6.71□□□□□ -1.34
BRCA1-205ENST00000461221 IGKV2D-28P01615 120 aa6.71□□□□□ -1.34
BRCA1-205ENST00000461221 COX17Q14061 63 aa6.71□□□□□ -1.34
BRCA1-205ENST00000461221 SMIM26A0A096LP01 95 aa6.71□□□□□ -1.34
BRCA1-205ENST00000461221 U3KQK5 164 aa6.71□□□□□ -1.34
BRCA1-205ENST00000461221 Q6JHZ5 121 aa6.7□□□□□ -1.34
BRCA1-205ENST00000461221 GDF5OSQ5U4N7 250 aa6.7□□□□□ -1.34
BRCA1-205ENST00000461221 Q6ZVQ6 151 aa6.7□□□□□ -1.34
BRCA1-205ENST00000461221 P0C879 139 aa6.7□□□□□ -1.34
BRCA1-205ENST00000461221 HRCT1Q6UXD1 115 aa6.7□□□□□ -1.34
BRCA1-205ENST00000461221 LINC00574Q9H8X3 128 aa6.7□□□□□ -1.34
BRCA1-205ENST00000461221 LST1O00453 97 aa6.7□□□□□ -1.34
BRCA1-205ENST00000461221 PKDREJQ9NTG1 2253 aa6.7□□□□□ -1.34
BRCA1-205ENST00000461221 PRR4Q16378 134 aa6.69□□□□□ -1.34
BRCA1-205ENST00000461221 MAPKAPK5-AS1Q8N8E1 139 aa6.69□□□□□ -1.34
BRCA1-205ENST00000461221 WFDC10AQ9H1F0 79 aa6.69□□□□□ -1.34
BRCA1-205ENST00000461221 WNK2Q9Y3S1 2297 aa6.69□□□□□ -1.34
BRCA1-205ENST00000461221 PLAC8L1A1L4L8 177 aa6.69□□□□□ -1.34
BRCA1-205ENST00000461221 FAM30AQ9NZY2 134 aa6.69□□□□□ -1.34
BRCA1-205ENST00000461221 NLRC5Q86WI3 1866 aa6.69□□□□□ -1.34
BRCA1-205ENST00000461221 RBX1P62877 108 aa6.69□□□□□ -1.34
BRCA1-205ENST00000461221 LELP1Q5T871 98 aa6.69□□□□□ -1.34
BRCA1-205ENST00000461221 ZNF407Q9C0G0 2248 aa6.68□□□□□ -1.34
BRCA1-205ENST00000461221 ACACAQ13085 2346 aa6.68□□□□□ -1.34
BRCA1-205ENST00000461221 IGHV4-31P0DP07 118 aa6.68□□□□□ -1.34
BRCA1-205ENST00000461221 LMO4P61968 165 aa6.68□□□□□ -1.34
BRCA1-205ENST00000461221 ZNF73O43830 326 aaPredicted RBP6.68□□□□□ -1.34
BRCA1-205ENST00000461221 MALRD1Q5VYJ5 2156 aa6.68□□□□□ -1.34
BRCA1-205ENST00000461221 C10orf25Q5T742 122 aa6.68□□□□□ -1.34
BRCA1-205ENST00000461221 MBD6Q96DN6 1003 aa6.68□□□□□ -1.34
BRCA1-205ENST00000461221 HELZP42694 1942 aaKnown RBP6.68□□□□□ -1.34
BRCA1-205ENST00000461221 IGLV9-49A0A0B4J1Y8 123 aa6.67□□□□□ -1.34
BRCA1-205ENST00000461221 IGHV4-30-4P0DP06 118 aa6.67□□□□□ -1.34
BRCA1-205ENST00000461221 LTBP1Q14766 1721 aa6.67□□□□□ -1.34
BRCA1-205ENST00000461221 GVINP1Q7Z2Y8 2422 aa6.67□□□□□ -1.34
BRCA1-205ENST00000461221 FSTL3O95633 263 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 87.4 ms