RNA–Protein interactions for RNA: ENST00000460826.1

HDLBP-229, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 442 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-229ENST00000460826 MPV17L2Q567V2 206 aa9.43□□□□□ -0.9
HDLBP-229ENST00000460826 C10orf126Q8N4M7 172 aa9.43□□□□□ -0.9
HDLBP-229ENST00000460826 TRBV27A0A0K0K1C4 114 aa9.42□□□□□ -0.9
HDLBP-229ENST00000460826 IBA57-AS1B1ANH7 110 aa9.42□□□□□ -0.9
HDLBP-229ENST00000460826 TMEM262E9PQX1 116 aa9.42□□□□□ -0.9
HDLBP-229ENST00000460826 I3L3M4 83 aa9.42□□□□□ -0.9
HDLBP-229ENST00000460826 K7EP13 123 aa9.42□□□□□ -0.9
HDLBP-229ENST00000460826 TNFRSF6BO95407 300 aa9.42□□□□□ -0.9
HDLBP-229ENST00000460826 TSHBP01222 138 aa9.42□□□□□ -0.9
HDLBP-229ENST00000460826 PMCHP20382 165 aa9.42□□□□□ -0.9
HDLBP-229ENST00000460826 AMTP48728 403 aa9.42□□□□□ -0.9
HDLBP-229ENST00000460826 SUMO2P61956 95 aaKnown RBP9.42□□□□□ -0.9
HDLBP-229ENST00000460826 Q6ZRN7 208 aaPredicted RBP9.42□□□□□ -0.9
HDLBP-229ENST00000460826 TMEM243Q9BU79 118 aa9.42□□□□□ -0.9
HDLBP-229ENST00000460826 TRBV24-1A0A075B6N3 115 aa9.41□□□□□ -0.9
HDLBP-229ENST00000460826 A0A087WX48 190 aa9.41□□□□□ -0.9
HDLBP-229ENST00000460826 TGIF2-C20orf24A0A0A6YYL0 155 aa9.41□□□□□ -0.9
HDLBP-229ENST00000460826 PPP1R17O96001 155 aa9.41□□□□□ -0.9
HDLBP-229ENST00000460826 ORMDL3Q8N138 153 aa9.41□□□□□ -0.9
HDLBP-229ENST00000460826 Q8N976 141 aa9.41□□□□□ -0.9
HDLBP-229ENST00000460826 PRELID3AQ96N28 172 aa9.41□□□□□ -0.9
HDLBP-229ENST00000460826 CHCHD7Q9BUK0 85 aa9.41□□□□□ -0.9
HDLBP-229ENST00000460826 APCSP02743 223 aa9.4□□□□□ -0.9
HDLBP-229ENST00000460826 PPBPP02775 128 aa9.4□□□□□ -0.9
HDLBP-229ENST00000460826 BTF3P20290 206 aaKnown RBP9.4□□□□□ -0.9
HDLBP-229ENST00000460826 RBX1P62877 108 aa9.4□□□□□ -0.9
HDLBP-229ENST00000460826 ELOBQ15370 118 aa9.4□□□□□ -0.9
HDLBP-229ENST00000460826 Q9HAA7 133 aa9.4□□□□□ -0.9
HDLBP-229ENST00000460826 KLK12Q9UKR0 248 aa9.4□□□□□ -0.9
HDLBP-229ENST00000460826 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.39□□□□□ -0.91
HDLBP-229ENST00000460826 IGKV2-29A2NJV5 120 aaPredicted RBP9.39□□□□□ -0.91
HDLBP-229ENST00000460826 PRSS29PA6NIE9 313 aa9.39□□□□□ -0.91
HDLBP-229ENST00000460826 VCYO14598 125 aa9.39□□□□□ -0.91
HDLBP-229ENST00000460826 TNP2Q05952 138 aa9.39□□□□□ -0.91
HDLBP-229ENST00000460826 KIAA1644Q3SXP7 199 aa9.39□□□□□ -0.91
HDLBP-229ENST00000460826 LINC00336Q6ZUF6 198 aa9.39□□□□□ -0.91
HDLBP-229ENST00000460826 C20orf78Q9BR46 151 aa9.39□□□□□ -0.91
HDLBP-229ENST00000460826 PHOX2AO14813 284 aa9.38□□□□□ -0.91
HDLBP-229ENST00000460826 ESDP10768 282 aa9.38□□□□□ -0.91
HDLBP-229ENST00000460826 RPL32P62910 135 aaKnown RBP9.38□□□□□ -0.91
HDLBP-229ENST00000460826 LAGE3Q14657 143 aa9.38□□□□□ -0.91
HDLBP-229ENST00000460826 YPEL4Q96NS1 127 aa9.38□□□□□ -0.91
HDLBP-229ENST00000460826 SMIM2Q9BVW6 85 aa9.38□□□□□ -0.91
HDLBP-229ENST00000460826 GNB1LQ9BYB4 327 aa9.38□□□□□ -0.91
HDLBP-229ENST00000460826 IGLV4-60A0A075B6I1 120 aa9.37□□□□□ -0.91
HDLBP-229ENST00000460826 HLA-DQA1P01909 254 aa9.37□□□□□ -0.91
HDLBP-229ENST00000460826 ANGP03950 147 aaKnown RBP9.37□□□□□ -0.91
HDLBP-229ENST00000460826 PKIAP61925 76 aa9.37□□□□□ -0.91
HDLBP-229ENST00000460826 CBLN2Q8IUK8 224 aa9.37□□□□□ -0.91
HDLBP-229ENST00000460826 C20orf203Q8NBC4 194 aa9.37□□□□□ -0.91
HDLBP-229ENST00000460826 DYNC1H1Q14204 4646 aaKnown RBP9.36□□□□□ -0.91
HDLBP-229ENST00000460826 A0A1B0GVY2 172 aa9.36□□□□□ -0.91
HDLBP-229ENST00000460826 UBE2L6O14933 153 aa9.36□□□□□ -0.91
HDLBP-229ENST00000460826 COX19Q49B96 90 aa9.36□□□□□ -0.91
HDLBP-229ENST00000460826 ENHOQ6UWT2 76 aa9.36□□□□□ -0.91
HDLBP-229ENST00000460826 NFE4Q86UQ8 179 aa9.36□□□□□ -0.91
HDLBP-229ENST00000460826 UBE2WQ96B02 151 aa9.36□□□□□ -0.91
HDLBP-229ENST00000460826 PKHD1P08F94 4074 aa9.36□□□□□ -0.91
HDLBP-229ENST00000460826 DNAH5Q8TE73 4624 aa9.35□□□□□ -0.91
HDLBP-229ENST00000460826 A0A1B0GUV1 79 aa9.35□□□□□ -0.91
HDLBP-229ENST00000460826 FCER1GP30273 86 aa9.35□□□□□ -0.91
HDLBP-229ENST00000460826 CLPSL2Q6UWE3 100 aa9.35□□□□□ -0.91
HDLBP-229ENST00000460826 KIR2DL4Q99706 377 aa9.35□□□□□ -0.91
HDLBP-229ENST00000460826 MRPL18Q9H0U6 180 aaKnown RBP9.35□□□□□ -0.91
HDLBP-229ENST00000460826 LAMTOR2Q9Y2Q5 125 aa9.35□□□□□ -0.91
HDLBP-229ENST00000460826 TRAV8-3A0A0A6YYJ7 113 aa9.34□□□□□ -0.91
HDLBP-229ENST00000460826 LOC389332A0A1B0GUA5 103 aa9.34□□□□□ -0.91
HDLBP-229ENST00000460826 PRSS47A8MTI9 375 aa9.34□□□□□ -0.91
HDLBP-229ENST00000460826 TCAPO15273 167 aa9.34□□□□□ -0.91
HDLBP-229ENST00000460826 FGF6P10767 208 aa9.34□□□□□ -0.91
HDLBP-229ENST00000460826 LINC00269Q8N2A0 174 aa9.34□□□□□ -0.91
HDLBP-229ENST00000460826 H7C423 109 aa9.33□□□□□ -0.92
HDLBP-229ENST00000460826 MT-ND6P03923 174 aa9.33□□□□□ -0.92
HDLBP-229ENST00000460826 FABP9Q0Z7S8 132 aa9.33□□□□□ -0.92
HDLBP-229ENST00000460826 RNASEKQ6P5S7 137 aaKnown RBP9.33□□□□□ -0.92
HDLBP-229ENST00000460826 MAP1LC3AQ9H492 121 aa9.33□□□□□ -0.92
HDLBP-229ENST00000460826 SMCO4Q9NRQ5 59 aa9.33□□□□□ -0.92
HDLBP-229ENST00000460826 PRR34Q9NV39 138 aa9.33□□□□□ -0.92
HDLBP-229ENST00000460826 BIRC6Q9NR09 4857 aa9.33□□□□□ -0.92
HDLBP-229ENST00000460826 CRPP02741 224 aa9.32□□□□□ -0.92
HDLBP-229ENST00000460826 AMMECR1LQ6DCA0 310 aa9.32□□□□□ -0.92
HDLBP-229ENST00000460826 ALKBH7Q9BT30 221 aaPredicted RBP9.32□□□□□ -0.92
HDLBP-229ENST00000460826 IGKV2D-24A0A075B6R9 120 aa9.31□□□□□ -0.92
HDLBP-229ENST00000460826 RPL39P62891 51 aaKnown RBP9.31□□□□□ -0.92
HDLBP-229ENST00000460826 REG3AQ06141 175 aa9.31□□□□□ -0.92
HDLBP-229ENST00000460826 MAPKAPK5-AS1Q8N8E1 139 aa9.31□□□□□ -0.92
HDLBP-229ENST00000460826 Q8N8P6 123 aa9.31□□□□□ -0.92
HDLBP-229ENST00000460826 TRAPPC1Q9Y5R8 145 aa9.31□□□□□ -0.92
HDLBP-229ENST00000460826 PSCAO43653 123 aa9.3□□□□□ -0.92
HDLBP-229ENST00000460826 IFI27P40305 119 aaPredicted RBP9.3□□□□□ -0.92
HDLBP-229ENST00000460826 Q0VG73 95 aa9.3□□□□□ -0.92
HDLBP-229ENST00000460826 MRPL52Q86TS9 123 aaKnown RBP9.3□□□□□ -0.92
HDLBP-229ENST00000460826 TM2D2Q9BX73 214 aa9.3□□□□□ -0.92
HDLBP-229ENST00000460826 A0A087WTM6 91 aa9.29□□□□□ -0.92
HDLBP-229ENST00000460826 LRCOL1A6NCL2 159 aa9.29□□□□□ -0.92
HDLBP-229ENST00000460826 SCO1O75880 301 aa9.29□□□□□ -0.92
HDLBP-229ENST00000460826 ZNF25P17030 456 aaPredicted RBP9.29□□□□□ -0.92
HDLBP-229ENST00000460826 WFDC2Q14508 124 aa9.29□□□□□ -0.92
HDLBP-229ENST00000460826 MIAQ16674 131 aa9.29□□□□□ -0.92
HDLBP-229ENST00000460826 RMI2Q96E14 147 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms