RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 TNP2Q05952 138 aa10.7□□□□□ -0.7
SDF4-204ENST00000459994 NEGR1Q7Z3B1 354 aa10.7□□□□□ -0.7
SDF4-204ENST00000459994 DAZ4Q86SG3 579 aaKnown RBP10.7□□□□□ -0.7
SDF4-204ENST00000459994 ATP6V0E2Q8NHE4 81 aa10.7□□□□□ -0.7
SDF4-204ENST00000459994 DAZ3Q9NR90 486 aaKnown RBP10.7□□□□□ -0.7
SDF4-204ENST00000459994 SDHAF1A6NFY7 115 aa10.69□□□□□ -0.7
SDF4-204ENST00000459994 ESRGQ1W209 222 aa10.69□□□□□ -0.7
SDF4-204ENST00000459994 TMEM70Q9BUB7 260 aa10.69□□□□□ -0.7
SDF4-204ENST00000459994 TRBV27A0A0K0K1C4 114 aa10.68□□□□□ -0.7
SDF4-204ENST00000459994 VCYO14598 125 aa10.68□□□□□ -0.7
SDF4-204ENST00000459994 CCL18P55774 89 aa10.68□□□□□ -0.7
SDF4-204ENST00000459994 TIRAPP58753 221 aa10.68□□□□□ -0.7
SDF4-204ENST00000459994 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.68□□□□□ -0.7
SDF4-204ENST00000459994 GTSF1LQ9H1H1 148 aa10.67□□□□□ -0.7
SDF4-204ENST00000459994 MAP1LC3AQ9H492 121 aa10.67□□□□□ -0.7
SDF4-204ENST00000459994 I3L3M4 83 aa10.66□□□□□ -0.7
SDF4-204ENST00000459994 TMEM97Q5BJF2 176 aa10.66□□□□□ -0.7
SDF4-204ENST00000459994 C6orf223Q8N319 242 aa10.66□□□□□ -0.7
SDF4-204ENST00000459994 SMIM2Q9BVW6 85 aa10.66□□□□□ -0.7
SDF4-204ENST00000459994 Q9H8V8 135 aa10.66□□□□□ -0.7
SDF4-204ENST00000459994 PCLOQ9Y6V0 5065 aa10.66□□□□□ -0.7
SDF4-204ENST00000459994 PMCHP20382 165 aa10.65□□□□□ -0.7
SDF4-204ENST00000459994 LYPD5Q6UWN5 251 aa10.65□□□□□ -0.7
SDF4-204ENST00000459994 IGHV3-38A0A0C4DH36 116 aa10.64□□□□□ -0.71
SDF4-204ENST00000459994 COTL1Q14019 142 aa10.64□□□□□ -0.71
SDF4-204ENST00000459994 Q8N8P6 123 aa10.64□□□□□ -0.71
SDF4-204ENST00000459994 C18orf32Q8TCD1 76 aa10.64□□□□□ -0.71
SDF4-204ENST00000459994 NXT2Q9NPJ8 142 aaKnown RBP10.64□□□□□ -0.71
SDF4-204ENST00000459994 RYR1P21817 5038 aa10.64□□□□□ -0.71
SDF4-204ENST00000459994 LOC389332A0A1B0GUA5 103 aa10.63□□□□□ -0.71
SDF4-204ENST00000459994 TCAPO15273 167 aa10.63□□□□□ -0.71
SDF4-204ENST00000459994 KIR2DL4Q99706 377 aa10.63□□□□□ -0.71
SDF4-204ENST00000459994 MRPS16Q9Y3D3 137 aaKnown RBP10.63□□□□□ -0.71
SDF4-204ENST00000459994 HSPG2P98160 4391 aa10.62□□□□□ -0.71
SDF4-204ENST00000459994 K7EMI3 77 aa10.62□□□□□ -0.71
SDF4-204ENST00000459994 TSHBP01222 138 aa10.62□□□□□ -0.71
SDF4-204ENST00000459994 LELP1Q5T871 98 aa10.62□□□□□ -0.71
SDF4-204ENST00000459994 NTM-AS1Q6ZSK4 140 aa10.62□□□□□ -0.71
SDF4-204ENST00000459994 UPK3BQ9BT76 320 aa10.62□□□□□ -0.71
SDF4-204ENST00000459994 LRP1BQ9NZR2 4599 aa10.62□□□□□ -0.71
SDF4-204ENST00000459994 TRBV6-8A0A0A6YYG3 113 aa10.61□□□□□ -0.71
SDF4-204ENST00000459994 C1orf196B1AJZ1 125 aa10.61□□□□□ -0.71
SDF4-204ENST00000459994 IFI27P40305 119 aaPredicted RBP10.61□□□□□ -0.71
SDF4-204ENST00000459994 Q0VG73 95 aa10.61□□□□□ -0.71
SDF4-204ENST00000459994 IQCJQ1A5X6 159 aa10.61□□□□□ -0.71
SDF4-204ENST00000459994 PRSS3P2Q8NHM4 247 aa10.61□□□□□ -0.71
SDF4-204ENST00000459994 LINC01546A6NGU7 62 aa10.6□□□□□ -0.71
SDF4-204ENST00000459994 HIST1H2BKO60814 126 aa10.6□□□□□ -0.71
SDF4-204ENST00000459994 HIST1H2BJP06899 126 aa10.6□□□□□ -0.71
SDF4-204ENST00000459994 HIST1H2BOP23527 126 aa10.6□□□□□ -0.71
SDF4-204ENST00000459994 FCER1GP30273 86 aa10.6□□□□□ -0.71
SDF4-204ENST00000459994 HIST1H2BBP33778 126 aa10.6□□□□□ -0.71
SDF4-204ENST00000459994 HIST1H2BDP58876 126 aa10.6□□□□□ -0.71
SDF4-204ENST00000459994 HIST1H2BCP62807 126 aa10.6□□□□□ -0.71
SDF4-204ENST00000459994 HIST2H2BEQ16778 126 aa10.6□□□□□ -0.71
SDF4-204ENST00000459994 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.6□□□□□ -0.71
SDF4-204ENST00000459994 HIST1H2BHQ93079 126 aa10.6□□□□□ -0.71
SDF4-204ENST00000459994 HIST1H2BNQ99877 126 aa10.6□□□□□ -0.71
SDF4-204ENST00000459994 HIST1H2BMQ99879 126 aa10.6□□□□□ -0.71
SDF4-204ENST00000459994 KRTAP4-5Q9BYR2 181 aa10.6□□□□□ -0.71
SDF4-204ENST00000459994 DNAH5Q8TE73 4624 aa10.59□□□□□ -0.71
SDF4-204ENST00000459994 TRBV25-1A0A075B6N4 114 aa10.59□□□□□ -0.71
SDF4-204ENST00000459994 IGHV1-24A0A0C4DH33 117 aa10.59□□□□□ -0.71
SDF4-204ENST00000459994 AMTP48728 403 aa10.59□□□□□ -0.71
SDF4-204ENST00000459994 RAB5BP61020 215 aa10.59□□□□□ -0.71
SDF4-204ENST00000459994 ESDP10768 282 aa10.58□□□□□ -0.72
SDF4-204ENST00000459994 FA2HQ7L5A8 372 aa10.58□□□□□ -0.72
SDF4-204ENST00000459994 NIT1Q86X76 327 aa10.58□□□□□ -0.72
SDF4-204ENST00000459994 TRAV8-6A0A0B4J262 113 aa10.57□□□□□ -0.72
SDF4-204ENST00000459994 LINC00614P0C842 121 aa10.57□□□□□ -0.72
SDF4-204ENST00000459994 LAGE3Q14657 143 aa10.57□□□□□ -0.72
SDF4-204ENST00000459994 ORMDL2Q53FV1 153 aa10.57□□□□□ -0.72
SDF4-204ENST00000459994 BAGE3Q86Y29 109 aa10.57□□□□□ -0.72
SDF4-204ENST00000459994 DEFB104AQ8WTQ1 72 aa10.57□□□□□ -0.72
SDF4-204ENST00000459994 URB1-AS1Q96HZ7 61 aa10.57□□□□□ -0.72
SDF4-204ENST00000459994 TMEM243Q9BU79 118 aa10.57□□□□□ -0.72
SDF4-204ENST00000459994 CHCHD7Q9BUK0 85 aa10.57□□□□□ -0.72
SDF4-204ENST00000459994 APOBP04114 4563 aaKnown RBP10.56□□□□□ -0.72
SDF4-204ENST00000459994 H7C423 109 aa10.56□□□□□ -0.72
SDF4-204ENST00000459994 CHCHD1Q96BP2 118 aaKnown RBP10.56□□□□□ -0.72
SDF4-204ENST00000459994 AP5S1Q9NUS5 200 aa10.56□□□□□ -0.72
SDF4-204ENST00000459994 C16orf90A8MZG2 172 aa10.55□□□□□ -0.72
SDF4-204ENST00000459994 G0S2P27469 103 aa10.55□□□□□ -0.72
SDF4-204ENST00000459994 KRTAP10-2P60368 255 aa10.55□□□□□ -0.72
SDF4-204ENST00000459994 Q6ZRN7 208 aaPredicted RBP10.55□□□□□ -0.72
SDF4-204ENST00000459994 C20orf203Q8NBC4 194 aa10.55□□□□□ -0.72
SDF4-204ENST00000459994 ABCA13Q86UQ4 5058 aa10.55□□□□□ -0.72
SDF4-204ENST00000459994 PKIAP61925 76 aa10.54□□□□□ -0.72
SDF4-204ENST00000459994 TTC32Q5I0X7 151 aa10.54□□□□□ -0.72
SDF4-204ENST00000459994 SPATA12Q7Z6I5 190 aa10.54□□□□□ -0.72
SDF4-204ENST00000459994 TMEM18Q96B42 140 aa10.54□□□□□ -0.72
SDF4-204ENST00000459994 CHCHD5Q9BSY4 110 aa10.54□□□□□ -0.72
SDF4-204ENST00000459994 SIVA1O15304 175 aa10.53□□□□□ -0.72
SDF4-204ENST00000459994 FUSP35637 526 aaKnown RBP eCLIP10.53□□□□□ -0.72
SDF4-204ENST00000459994 COA6Q5JTJ3 125 aaKnown RBP10.53□□□□□ -0.72
SDF4-204ENST00000459994 RNASEKQ6P5S7 137 aaKnown RBP10.53□□□□□ -0.72
SDF4-204ENST00000459994 SERF1AO75920 110 aa10.52□□□□□ -0.73
SDF4-204ENST00000459994 LINC00310P59036 64 aa10.52□□□□□ -0.73
SDF4-204ENST00000459994 SMAGPQ0VAQ4 97 aa10.52□□□□□ -0.73
SDF4-204ENST00000459994 WFDC10BQ8IUB3 73 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms