RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 A0A0B4J2C4 111 aa10.34□□□□□ -0.75
SCFD1-203ENST00000458591 IGHV3-38A0A0C4DH36 116 aa10.34□□□□□ -0.75
SCFD1-203ENST00000458591 ZNF469Q96JG9 3925 aaPredicted RBP10.34□□□□□ -0.75
SCFD1-203ENST00000458591 TEX15Q9BXT5 2789 aa10.34□□□□□ -0.75
SCFD1-203ENST00000458591 M0QXV9 152 aa10.34□□□□□ -0.75
SCFD1-203ENST00000458591 ZNF702PQ9H963 129 aa10.34□□□□□ -0.75
SCFD1-203ENST00000458591 ERG28Q9UKR5 140 aa10.34□□□□□ -0.75
SCFD1-203ENST00000458591 ACACBO00763 2458 aa10.34□□□□□ -0.75
SCFD1-203ENST00000458591 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.33□□□□□ -0.76
SCFD1-203ENST00000458591 SLC25A20O43772 301 aa10.33□□□□□ -0.76
SCFD1-203ENST00000458591 NPC2P61916 151 aa10.33□□□□□ -0.76
SCFD1-203ENST00000458591 CD28P10747 220 aa10.33□□□□□ -0.76
SCFD1-203ENST00000458591 Q6ZSV7 163 aa10.33□□□□□ -0.76
SCFD1-203ENST00000458591 LINC01356Q8N9X3 169 aa10.33□□□□□ -0.76
SCFD1-203ENST00000458591 ABCA12Q86UK0 2595 aa10.32□□□□□ -0.76
SCFD1-203ENST00000458591 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.32□□□□□ -0.76
SCFD1-203ENST00000458591 A0A096LNT2 108 aa10.32□□□□□ -0.76
SCFD1-203ENST00000458591 IGKV2-29A2NJV5 120 aaPredicted RBP10.32□□□□□ -0.76
SCFD1-203ENST00000458591 C9JAW5 83 aa10.32□□□□□ -0.76
SCFD1-203ENST00000458591 IGHV3-33P01772 117 aa10.32□□□□□ -0.76
SCFD1-203ENST00000458591 TMEM263Q8WUH6 116 aaKnown RBP10.32□□□□□ -0.76
SCFD1-203ENST00000458591 Q1RN00 199 aa10.32□□□□□ -0.76
SCFD1-203ENST00000458591 TRAV26-1A0A087WT03 109 aa10.31□□□□□ -0.76
SCFD1-203ENST00000458591 A0A0J9YXY3 114 aa10.31□□□□□ -0.76
SCFD1-203ENST00000458591 PRB1P04280 392 aa10.31□□□□□ -0.76
SCFD1-203ENST00000458591 IGHV3-30-3P0DP02 117 aa10.31□□□□□ -0.76
SCFD1-203ENST00000458591 MYO9AB2RTY4 2548 aa10.31□□□□□ -0.76
SCFD1-203ENST00000458591 TRGV11A0A075B6L2 103 aa10.31□□□□□ -0.76
SCFD1-203ENST00000458591 ADAMTSL4-AS1Q5T5F5 129 aa10.31□□□□□ -0.76
SCFD1-203ENST00000458591 VPREB3Q9UKI3 123 aa10.31□□□□□ -0.76
SCFD1-203ENST00000458591 LRRK2Q5S007 2527 aa10.3□□□□□ -0.76
SCFD1-203ENST00000458591 NIPBLQ6KC79 2804 aaeCLIP10.3□□□□□ -0.76
SCFD1-203ENST00000458591 ATXN8Q156A1 80 aa10.3□□□□□ -0.76
SCFD1-203ENST00000458591 PTPN13Q12923 2485 aa10.3□□□□□ -0.76
SCFD1-203ENST00000458591 H3BMM0 161 aa10.3□□□□□ -0.76
SCFD1-203ENST00000458591 KRTAP10-9P60411 292 aa10.3□□□□□ -0.76
SCFD1-203ENST00000458591 TMEM61Q8N0U2 210 aa10.3□□□□□ -0.76
SCFD1-203ENST00000458591 UBE2E2Q96LR5 201 aa10.29□□□□□ -0.76
SCFD1-203ENST00000458591 CHD6Q8TD26 2715 aa10.29□□□□□ -0.76
SCFD1-203ENST00000458591 M0R2P5 195 aa10.29□□□□□ -0.76
SCFD1-203ENST00000458591 PRSS2P07478 247 aa10.29□□□□□ -0.76
SCFD1-203ENST00000458591 KHDC1LQ5JSQ8 128 aa10.29□□□□□ -0.76
SCFD1-203ENST00000458591 ZFAND6Q6FIF0 208 aa10.29□□□□□ -0.76
SCFD1-203ENST00000458591 TNFRSF18Q9Y5U5 241 aa10.29□□□□□ -0.76
SCFD1-203ENST00000458591 TLN2Q9Y4G6 2542 aa10.28□□□□□ -0.76
SCFD1-203ENST00000458591 ZNF462Q96JM2 2506 aa10.28□□□□□ -0.76
SCFD1-203ENST00000458591 GATA3P23771 443 aa10.28□□□□□ -0.76
SCFD1-203ENST00000458591 CLUHP3Q96NS8 147 aa10.28□□□□□ -0.76
SCFD1-203ENST00000458591 LITAFQ99732 161 aa10.28□□□□□ -0.76
SCFD1-203ENST00000458591 CHCHD7Q9BUK0 85 aa10.28□□□□□ -0.76
SCFD1-203ENST00000458591 TIMM21Q9BVV7 248 aa10.28□□□□□ -0.76
SCFD1-203ENST00000458591 Q6YL49 198 aa10.28□□□□□ -0.76
SCFD1-203ENST00000458591 TEX29Q8N6K0 151 aa10.28□□□□□ -0.76
SCFD1-203ENST00000458591 EPG5Q9HCE0 2579 aa10.27□□□□□ -0.76
SCFD1-203ENST00000458591 DAND5Q8N907 189 aa10.27□□□□□ -0.77
SCFD1-203ENST00000458591 LINC00467Q9BRT7 94 aa10.27□□□□□ -0.77
SCFD1-203ENST00000458591 NF1P21359 2839 aa10.27□□□□□ -0.77
SCFD1-203ENST00000458591 NACAE9PAV3 2078 aa10.27□□□□□ -0.77
SCFD1-203ENST00000458591 TMEM89A2RUT3 159 aa10.26□□□□□ -0.77
SCFD1-203ENST00000458591 LINC01620Q4KN68 170 aa10.26□□□□□ -0.77
SCFD1-203ENST00000458591 Q5PR19 223 aa10.26□□□□□ -0.77
SCFD1-203ENST00000458591 ANAPC13Q9BS18 74 aa10.26□□□□□ -0.77
SCFD1-203ENST00000458591 C11orf44Q8N8P7 122 aa10.26□□□□□ -0.77
SCFD1-203ENST00000458591 LINC01587Q99440 93 aa10.26□□□□□ -0.77
SCFD1-203ENST00000458591 MRPS36P82909 103 aaKnown RBP10.25□□□□□ -0.77
SCFD1-203ENST00000458591 UBE2D4Q9Y2X8 147 aa10.25□□□□□ -0.77
SCFD1-203ENST00000458591 PYGO1Q9Y3Y4 419 aa10.25□□□□□ -0.77
SCFD1-203ENST00000458591 NAV2Q8IVL1 2488 aa10.25□□□□□ -0.77
SCFD1-203ENST00000458591 IGHV3OR16-12A0A075B7B8 117 aa10.25□□□□□ -0.77
SCFD1-203ENST00000458591 TRBV30A0A0K0K1B3 111 aa10.25□□□□□ -0.77
SCFD1-203ENST00000458591 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.25□□□□□ -0.77
SCFD1-203ENST00000458591 PRRC2AP48634 2157 aaKnown RBP10.25□□□□□ -0.77
SCFD1-203ENST00000458591 SNCGO76070 127 aa10.24□□□□□ -0.77
SCFD1-203ENST00000458591 IGHV4-31P0DP07 118 aa10.24□□□□□ -0.77
SCFD1-203ENST00000458591 NTN5Q8WTR8 489 aaPredicted RBP10.24□□□□□ -0.77
SCFD1-203ENST00000458591 MAP6D1Q9H9H5 199 aa10.24□□□□□ -0.77
SCFD1-203ENST00000458591 NDUFA12Q9UI09 145 aa10.24□□□□□ -0.77
SCFD1-203ENST00000458591 SONP18583 2426 aaKnown RBP10.24□□□□□ -0.77
SCFD1-203ENST00000458591 NBPF19A0A087WUL8 3843 aa10.24□□□□□ -0.77
SCFD1-203ENST00000458591 TRIAP1O43715 76 aa10.24□□□□□ -0.77
SCFD1-203ENST00000458591 NDUFA7O95182 113 aa10.24□□□□□ -0.77
SCFD1-203ENST00000458591 RNF152Q8N8N0 203 aa10.24□□□□□ -0.77
SCFD1-203ENST00000458591 RNF183Q96D59 192 aa10.24□□□□□ -0.77
SCFD1-203ENST00000458591 TRBV10-2A0A0K0K1G8 114 aa10.23□□□□□ -0.77
SCFD1-203ENST00000458591 DSCR9P59020 149 aa10.23□□□□□ -0.77
SCFD1-203ENST00000458591 C11orf72Q8NBR9 251 aa10.23□□□□□ -0.77
SCFD1-203ENST00000458591 CITED1Q99966 193 aa10.23□□□□□ -0.77
SCFD1-203ENST00000458591 EDA2RQ9HAV5 297 aa10.23□□□□□ -0.77
SCFD1-203ENST00000458591 XCL2Q9UBD3 114 aa10.23□□□□□ -0.77
SCFD1-203ENST00000458591 WNK1Q9H4A3 2382 aa10.23□□□□□ -0.77
SCFD1-203ENST00000458591 IGHV1-58A0A0C4DH39 117 aa10.23□□□□□ -0.77
SCFD1-203ENST00000458591 LINC01600Q96MT4 127 aa10.23□□□□□ -0.77
SCFD1-203ENST00000458591 A0A0U1RRA0 63 aa10.22□□□□□ -0.77
SCFD1-203ENST00000458591 RPL13AP40429 203 aaKnown RBP10.22□□□□□ -0.77
SCFD1-203ENST00000458591 COX6A2Q02221 97 aa10.22□□□□□ -0.77
SCFD1-203ENST00000458591 SPANXDQ9BXN6 97 aa10.22□□□□□ -0.77
SCFD1-203ENST00000458591 SPANXCQ9NY87 97 aa10.22□□□□□ -0.77
SCFD1-203ENST00000458591 NOTCH3Q9UM47 2321 aa10.22□□□□□ -0.77
SCFD1-203ENST00000458591 SETD2Q9BYW2 2564 aaPredicted RBP10.22□□□□□ -0.77
SCFD1-203ENST00000458591 FSHBP01225 129 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms