RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983	ELOB	Q15370	118 aa		3.23	□□□□□ -1.89
COL21A1-204	ENST00000456983	OR10J3	Q5JRS4	329 aa		3.23	□□□□□ -1.89
COL21A1-204	ENST00000456983	WDR73	Q6P4I2	378 aa		3.23	□□□□□ -1.89
COL21A1-204	ENST00000456983	NEGR1	Q7Z3B1	354 aa		3.23	□□□□□ -1.89
COL21A1-204	ENST00000456983	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	3.23	□□□□□ -1.89
COL21A1-204	ENST00000456983	C15orf53	Q8NAA6	179 aa		3.23	□□□□□ -1.89
COL21A1-204	ENST00000456983	FRZB	Q92765	325 aa		3.23	□□□□□ -1.89
COL21A1-204	ENST00000456983	RPL39L	Q96EH5	51 aa	Known RBP	3.23	□□□□□ -1.89
COL21A1-204	ENST00000456983	RNF185	Q96GF1	192 aa		3.23	□□□□□ -1.89
COL21A1-204	ENST00000456983	VSIG2	Q96IQ7	327 aa		3.23	□□□□□ -1.89
COL21A1-204	ENST00000456983	IMMP2L	Q96T52	175 aa		3.23	□□□□□ -1.89
COL21A1-204	ENST00000456983	TMEM191A	Q9H0A3	160 aa		3.23	□□□□□ -1.89
COL21A1-204	ENST00000456983	SMCO4	Q9NRQ5	59 aa		3.23	□□□□□ -1.89
COL21A1-204	ENST00000456983	KIF25-AS1	Q9Y6Z4	181 aa		3.23	□□□□□ -1.89
COL21A1-204	ENST00000456983	PLEC	Q15149	4684 aa	Known RBP	3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	TRAV9-1	A0A075B6T8	112 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	TRBV6-4	A0A1B0GX49	114 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983		D6R8Y8	96 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	CIDEA	O60543	219 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	HLA-DQA1	P01909	254 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	RPS10	P46783	165 aa	Known RBP	3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	LINC00315	P59091	139 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	SLA	Q13239	276 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	KIAA1644	Q3SXP7	199 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	MRPL51	Q4U2R6	128 aa	Known RBP	3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	RASL11A	Q6T310	242 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	TMEM136	Q6ZRR5	245 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	GATD1	Q8NB37	220 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	NEXN-AS1	Q8NBZ9	246 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	ZNRF2	Q8NHG8	242 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	DEFB104A	Q8WTQ1	72 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	MRAP2	Q96G30	205 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	TMEM242	Q9NWH2	141 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983		Q9UF83	564 aa		3.22	□□□□□ -1.89
COL21A1-204	ENST00000456983	TRBV7-3	A0A075B6L6	115 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	TRBV10-1	A0A0K0K1A3	114 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983		M0QY20	66 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	LY6G6C	O95867	125 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	NPY	P01303	97 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	APCS	P02743	223 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	LINC00694	P0DN24	101 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	RAB4A	P20338	218 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	S100A1	P23297	94 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	CKS2	P33552	79 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	MRPL23	Q16540	153 aa	Known RBP	3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	FAM104B	Q5XKR9	115 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	ORMDL3	Q8N138	153 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	PRR26	Q8N8Z3	221 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	ATP6V0E2	Q8NHE4	81 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	KRTAP4-3	Q9BYR4	195 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	APLN	Q9ULZ1	77 aa		3.21	□□□□□ -1.9
COL21A1-204	ENST00000456983	TRBV24-1	A0A075B6N3	115 aa		3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983	SDHAF1	A6NFY7	115 aa		3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983		H3BNG1	76 aa		3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983	MT-ND6	P03923	174 aa		3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983	CCL18	P55774	89 aa		3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983	UBE2D3	P61077	147 aa		3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983	UBE2D2	P62837	147 aa		3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983	FABP9	Q0Z7S8	132 aa		3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983	PRELID3A	Q96N28	172 aa		3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983	YPEL4	Q96NS1	127 aa		3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983	ST20	Q9HBF5	79 aa		3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983	NIT2	Q9NQR4	276 aa		3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983	TMA7	Q9Y2S6	64 aa	Known RBP	3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983	LINC00588	Q9Y4M8	146 aa		3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983	TRAPPC1	Q9Y5R8	145 aa		3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983	OBSCN	Q5VST9	7968 aa		3.2	□□□□□ -1.9
COL21A1-204	ENST00000456983	IGLV2-18	A0A075B6J9	118 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	LOC389332	A0A1B0GUA5	103 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	TNFRSF6B	O95407	300 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	PPBP	P02775	128 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	RAB5A	P20339	215 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	FCER1G	P30273	86 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	AMT	P48728	403 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	TCTA	P57738	103 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	COTL1	Q14019	142 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	IQCJ	Q1A5X6	159 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	ESRG	Q1W209	222 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	COX19	Q49B96	90 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	SH2D6	Q7Z4S9	175 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	DAZ4	Q86SG3	579 aa	Known RBP	3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	WFDC10B	Q8IUB3	73 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	DNAJC30	Q96LL9	226 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	TMEM70	Q9BUB7	260 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	SMIM2	Q9BVW6	85 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	GNB1L	Q9BYB4	327 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	GTSF1L	Q9H1H1	148 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	MAP1LC3A	Q9H492	121 aa		3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	DAZ3	Q9NR90	486 aa	Known RBP	3.19	□□□□□ -1.9
COL21A1-204	ENST00000456983	DNAH1	Q9P2D7	4330 aa		3.18	□□□□□ -1.9
COL21A1-204	ENST00000456983	TRBV25-1	A0A075B6N4	114 aa		3.18	□□□□□ -1.9
COL21A1-204	ENST00000456983	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	3.18	□□□□□ -1.9
COL21A1-204	ENST00000456983	TRAV8-6	A0A0B4J262	113 aa		3.18	□□□□□ -1.9
COL21A1-204	ENST00000456983	IGHV1-24	A0A0C4DH33	117 aa		3.18	□□□□□ -1.9
COL21A1-204	ENST00000456983		A0A1B0GVY2	172 aa		3.18	□□□□□ -1.9
COL21A1-204	ENST00000456983	IGKV2-29	A2NJV5	120 aa	Predicted RBP	3.18	□□□□□ -1.9
COL21A1-204	ENST00000456983	UBE2L6	O14933	153 aa		3.18	□□□□□ -1.9
COL21A1-204	ENST00000456983	TCAP	O15273	167 aa		3.18	□□□□□ -1.9
COL21A1-204	ENST00000456983	PPP1R17	O96001	155 aa		3.18	□□□□□ -1.9
COL21A1-204	ENST00000456983	TSHB	P01222	138 aa		3.18	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms