RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 K7EN84 100 aa7.58□□□□□ -1.2
LMCD1-206ENST00000456506 HLA-DQA1P01909 254 aa7.58□□□□□ -1.2
LMCD1-206ENST00000456506 MIAQ16674 131 aa7.58□□□□□ -1.2
LMCD1-206ENST00000456506 FAM162BQ5T6X4 162 aa7.58□□□□□ -1.2
LMCD1-206ENST00000456506 Q6ZRU5 148 aa7.58□□□□□ -1.2
LMCD1-206ENST00000456506 FAM231DQ6ZW35 169 aa7.58□□□□□ -1.2
LMCD1-206ENST00000456506 ZFP82Q8N141 532 aa7.58□□□□□ -1.2
LMCD1-206ENST00000456506 CTDSP1Q9GZU7 261 aa7.58□□□□□ -1.2
LMCD1-206ENST00000456506 TMSB15BA0A087X1C1 80 aa7.57□□□□□ -1.2
LMCD1-206ENST00000456506 RAB4BP61018 213 aa7.57□□□□□ -1.2
LMCD1-206ENST00000456506 OSTCQ9NRP0 149 aa7.57□□□□□ -1.2
LMCD1-206ENST00000456506 TMEM262E9PQX1 116 aa7.56□□□□□ -1.2
LMCD1-206ENST00000456506 PPP1R2P9O14990 202 aa7.56□□□□□ -1.2
LMCD1-206ENST00000456506 CRPP02741 224 aa7.56□□□□□ -1.2
LMCD1-206ENST00000456506 MT-ND4LP03901 98 aa7.56□□□□□ -1.2
LMCD1-206ENST00000456506 ANGP03950 147 aaKnown RBP7.56□□□□□ -1.2
LMCD1-206ENST00000456506 SLPIP03973 132 aa7.56□□□□□ -1.2
LMCD1-206ENST00000456506 RPL19P84098 196 aaKnown RBP7.56□□□□□ -1.2
LMCD1-206ENST00000456506 ADIRFQ15847 76 aa7.56□□□□□ -1.2
LMCD1-206ENST00000456506 OR10AG1Q8NH19 301 aa7.56□□□□□ -1.2
LMCD1-206ENST00000456506 ANAPC16Q96DE5 110 aa7.56□□□□□ -1.2
LMCD1-206ENST00000456506 C19orf71A6NCJ1 209 aa7.55□□□□□ -1.2
LMCD1-206ENST00000456506 CNBPP62633 177 aaKnown RBP7.55□□□□□ -1.2
LMCD1-206ENST00000456506 RBX1P62877 108 aa7.55□□□□□ -1.2
LMCD1-206ENST00000456506 KCNIP4Q6PIL6 250 aa7.55□□□□□ -1.2
LMCD1-206ENST00000456506 IMMP2LQ96T52 175 aa7.55□□□□□ -1.2
LMCD1-206ENST00000456506 SSBP4Q9BWG4 385 aaPredicted RBP7.55□□□□□ -1.2
LMCD1-206ENST00000456506 KIF25-AS1Q9Y6Z4 181 aa7.55□□□□□ -1.2
LMCD1-206ENST00000456506 SNAI2O43623 268 aa7.54□□□□□ -1.2
LMCD1-206ENST00000456506 CXCL1P09341 107 aa7.54□□□□□ -1.2
LMCD1-206ENST00000456506 CT83Q5H943 113 aa7.53□□□□□ -1.2
LMCD1-206ENST00000456506 CLPSL2Q6UWE3 100 aa7.53□□□□□ -1.2
LMCD1-206ENST00000456506 LINC00269Q8N2A0 174 aa7.53□□□□□ -1.2
LMCD1-206ENST00000456506 NUDT10Q8NFP7 164 aa7.53□□□□□ -1.2
LMCD1-206ENST00000456506 NUDT11Q96G61 164 aa7.53□□□□□ -1.2
LMCD1-206ENST00000456506 YPEL4Q96NS1 127 aa7.53□□□□□ -1.2
LMCD1-206ENST00000456506 CHCHD5Q9BSY4 110 aa7.53□□□□□ -1.2
LMCD1-206ENST00000456506 RPS10P5Q9NQ39 176 aa7.53□□□□□ -1.2
LMCD1-206ENST00000456506 SMCO4Q9NRQ5 59 aa7.53□□□□□ -1.2
LMCD1-206ENST00000456506 V9GYV3 84 aa7.53□□□□□ -1.2
LMCD1-206ENST00000456506 FAM231BA6NCW3 169 aa7.52□□□□□ -1.21
LMCD1-206ENST00000456506 CHTF8P0CG12 524 aa7.52□□□□□ -1.21
LMCD1-206ENST00000456506 PKIAP61925 76 aa7.52□□□□□ -1.21
LMCD1-206ENST00000456506 ZNF56Q15929 161 aa7.52□□□□□ -1.21
LMCD1-206ENST00000456506 IQCJQ1A5X6 159 aa7.52□□□□□ -1.21
LMCD1-206ENST00000456506 SPACA4Q8TDM5 124 aa7.52□□□□□ -1.21
LMCD1-206ENST00000456506 TRAV9-1A0A075B6T8 112 aa7.51□□□□□ -1.21
LMCD1-206ENST00000456506 A0A087WYN8 130 aa7.51□□□□□ -1.21
LMCD1-206ENST00000456506 OR5AL1P0C617 328 aa7.51□□□□□ -1.21
LMCD1-206ENST00000456506 FOXA3P55318 350 aaPredicted RBP7.51□□□□□ -1.21
LMCD1-206ENST00000456506 GAGE6Q13070 117 aa7.51□□□□□ -1.21
LMCD1-206ENST00000456506 ODF1Q14990 250 aa7.51□□□□□ -1.21
LMCD1-206ENST00000456506 C20orf203Q8NBC4 194 aa7.51□□□□□ -1.21
LMCD1-206ENST00000456506 GFRA4Q9GZZ7 299 aa7.51□□□□□ -1.21
LMCD1-206ENST00000456506 GATCO43716 136 aaKnown RBP7.5□□□□□ -1.21
LMCD1-206ENST00000456506 SCO1O75880 301 aa7.5□□□□□ -1.21
LMCD1-206ENST00000456506 REG3AQ06141 175 aa7.5□□□□□ -1.21
LMCD1-206ENST00000456506 TMEM97Q5BJF2 176 aa7.5□□□□□ -1.21
LMCD1-206ENST00000456506 RNF185Q96GF1 192 aa7.5□□□□□ -1.21
LMCD1-206ENST00000456506 RNASE7Q9H1E1 156 aaKnown RBP7.5□□□□□ -1.21
LMCD1-206ENST00000456506 PLAC8Q9NZF1 115 aa7.5□□□□□ -1.21
LMCD1-206ENST00000456506 LPAP08519 4548 aa7.5□□□□□ -1.21
LMCD1-206ENST00000456506 IGLV10-54A0A075B6I4 117 aa7.49□□□□□ -1.21
LMCD1-206ENST00000456506 TRBV24-1A0A075B6N3 115 aa7.49□□□□□ -1.21
LMCD1-206ENST00000456506 MUC21A0A0G2JKD1 596 aa7.49□□□□□ -1.21
LMCD1-206ENST00000456506 MUC21A0A140T8X8 626 aa7.49□□□□□ -1.21
LMCD1-206ENST00000456506 SMIM27A0A1W2PRY6 76 aa7.49□□□□□ -1.21
LMCD1-206ENST00000456506 A8MWL6 223 aa7.49□□□□□ -1.21
LMCD1-206ENST00000456506 P01737 135 aa7.49□□□□□ -1.21
LMCD1-206ENST00000456506 TSKUQ8WUA8 353 aa7.49□□□□□ -1.21
LMCD1-206ENST00000456506 LINC01600Q96MT4 127 aa7.49□□□□□ -1.21
LMCD1-206ENST00000456506 RPP21Q9H633 154 aaKnown RBP7.49□□□□□ -1.21
LMCD1-206ENST00000456506 IGLV4-60A0A075B6I1 120 aa7.48□□□□□ -1.21
LMCD1-206ENST00000456506 TRBV25-1A0A075B6N4 114 aa7.48□□□□□ -1.21
LMCD1-206ENST00000456506 IGHV3-64A0A075B6Q5 118 aa7.48□□□□□ -1.21
LMCD1-206ENST00000456506 hDV102S1A0JD36 115 aa7.48□□□□□ -1.21
LMCD1-206ENST00000456506 COLCA2A8K830 154 aa7.48□□□□□ -1.21
LMCD1-206ENST00000456506 M0QY20 66 aa7.48□□□□□ -1.21
LMCD1-206ENST00000456506 PHOX2AO14813 284 aa7.48□□□□□ -1.21
LMCD1-206ENST00000456506 RPS20P60866 119 aaKnown RBP7.48□□□□□ -1.21
LMCD1-206ENST00000456506 CBLN2Q8IUK8 224 aa7.48□□□□□ -1.21
LMCD1-206ENST00000456506 C15orf56Q8N910 161 aa7.48□□□□□ -1.21
LMCD1-206ENST00000456506 BTF3L4Q96K17 158 aa7.48□□□□□ -1.21
LMCD1-206ENST00000456506 TRAV8-4A0A0B4J246 113 aa7.47□□□□□ -1.21
LMCD1-206ENST00000456506 A0A1B0GUV1 79 aa7.47□□□□□ -1.21
LMCD1-206ENST00000456506 IGHV1-24A0A0C4DH33 117 aa7.46□□□□□ -1.22
LMCD1-206ENST00000456506 XKRY2A2RUG3 117 aa7.46□□□□□ -1.22
LMCD1-206ENST00000456506 F5H697 171 aa7.46□□□□□ -1.22
LMCD1-206ENST00000456506 IGLC6P0CF74 106 aa7.46□□□□□ -1.22
LMCD1-206ENST00000456506 S100PP25815 95 aa7.46□□□□□ -1.22
LMCD1-206ENST00000456506 SPANXN1Q5VSR9 72 aa7.46□□□□□ -1.22
LMCD1-206ENST00000456506 OR2D3Q8NGH3 330 aa7.46□□□□□ -1.22
LMCD1-206ENST00000456506 KRTAP10-8P60410 259 aa7.45□□□□□ -1.22
LMCD1-206ENST00000456506 PRR3P79522 188 aaKnown RBP7.45□□□□□ -1.22
LMCD1-206ENST00000456506 SUMO4Q6EEV6 95 aa7.45□□□□□ -1.22
LMCD1-206ENST00000456506 WDR73Q6P4I2 378 aa7.45□□□□□ -1.22
LMCD1-206ENST00000456506 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.45□□□□□ -1.22
LMCD1-206ENST00000456506 AP1S3Q96PC3 154 aa7.45□□□□□ -1.22
LMCD1-206ENST00000456506 NAT8BQ9UHF3 227 aa7.45□□□□□ -1.22
LMCD1-206ENST00000456506 COX19Q49B96 90 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms