RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ZNF56Q15929 161 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 LYPD1Q8N2G4 141 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 UPK3BQ9BT76 320 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 DMBT1Q9UGM3 2413 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 IGHV7-81A0A0B4J1V7 117 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 TRAV12-1A0A0B4J245 112 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 CD3EP07766 207 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 ZNF625Q96I27 306 aaPredicted RBP3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 DUX5Q96PT3 197 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 C10orf105Q8TEF2 133 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 DCANP1Q8TF63 244 aa3.32□□□□□ -1.88
DEPDC1-202ENST00000456315 A0A0J9YXY3 114 aa3.31□□□□□ -1.88
DEPDC1-202ENST00000456315 IGHV3-30-3P0DP02 117 aa3.31□□□□□ -1.88
DEPDC1-202ENST00000456315 PDE6HQ13956 83 aa3.31□□□□□ -1.88
DEPDC1-202ENST00000456315 HRCT1Q6UXD1 115 aa3.31□□□□□ -1.88
DEPDC1-202ENST00000456315 LINC00336Q6ZUF6 198 aa3.31□□□□□ -1.88
DEPDC1-202ENST00000456315 Q96MF0 132 aa3.31□□□□□ -1.88
DEPDC1-202ENST00000456315 TRBV7-7A0A0K0K1E9 115 aa3.31□□□□□ -1.88
DEPDC1-202ENST00000456315 HIST2H2BDQ6DRA6 164 aa3.31□□□□□ -1.88
DEPDC1-202ENST00000456315 IGHV4OR15-8A0A075B7B6 117 aa3.31□□□□□ -1.88
DEPDC1-202ENST00000456315 A0A087WW49 117 aa3.31□□□□□ -1.88
DEPDC1-202ENST00000456315 NCBP2LA6PVI3 153 aaKnown RBP3.31□□□□□ -1.88
DEPDC1-202ENST00000456315 OVOL1O14753 267 aa3.31□□□□□ -1.88
DEPDC1-202ENST00000456315 RNASE6Q93091 150 aaKnown RBP3.31□□□□□ -1.88
DEPDC1-202ENST00000456315 HOXD3P31249 432 aaPredicted RBP3.31□□□□□ -1.88
DEPDC1-202ENST00000456315 Q6Q795 121 aa3.31□□□□□ -1.88
DEPDC1-202ENST00000456315 Q6ZSN1 163 aa3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 SCGB1C2P0DMR2 95 aa3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 C15orf32Q32M92 178 aa3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 C1orf162Q8NEQ5 155 aaPredicted RBP3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 KLK9Q9UKQ9 250 aa3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 FLG2Q5D862 2391 aaPredicted RBP3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 HILS1P60008 231 aa3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 PMVKQ15126 192 aa3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 SPANXN1Q5VSR9 72 aa3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 TMEM61Q8N0U2 210 aa3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 SPXQ9BT56 116 aa3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 SDHAF1A6NFY7 115 aa3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 E7EQL1 145 aa3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 SNCGO76070 127 aa3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 FHL2Q14192 279 aa3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 C5orf38Q86SI9 138 aa3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 TMEM219Q86XT9 240 aa3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 ZNF256Q9Y2P7 627 aaPredicted RBP3.3□□□□□ -1.88
DEPDC1-202ENST00000456315 TRAV25A0A0B4J276 109 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 TRBV10-2A0A0K0K1G8 114 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 M0R2N4 97 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 LST1O00453 97 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 Q8N9W7 124 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 OR10J6PQ8NGY7 276 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 DNAJC30Q96LL9 226 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 IGLV4-3A0A075B6K6 122 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 TRBV27A0A0K0K1C4 114 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 SUB1P53999 127 aaKnown RBP eCLIP3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 BSPH1Q075Z2 132 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 TIMM21Q9BVV7 248 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 Q9HAA7 133 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 LINC00846Q9NV44 126 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 CDKN2A-AS1Q9UH64 79 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 HUWE1Q7Z6Z7 4374 aaKnown RBP3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 C19orf84I3L1E1 186 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 RBMY1A1P0DJD3 496 aaKnown RBP3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 RBMY1CP0DJD4 496 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 HIST1H4AP62805 103 aaKnown RBP3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 RBMY1FQ15415 496 aaKnown RBP3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 VMA21Q3ZAQ7 101 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 KMT2AQ03164 3969 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 MBD3L4A6NDZ8 208 aaPredicted RBP3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 MBD3L3A6NE82 208 aaPredicted RBP3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 MBD3L5A6NJ08 208 aaPredicted RBP3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 CD59P13987 128 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 DEFB121Q5J5C9 76 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 C10orf99Q6UWK7 81 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 C9orf139Q6ZV77 190 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 RNF152Q8N8N0 203 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 MBD3L2Q8NHZ7 208 aaPredicted RBP3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 U3KQE9 123 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 TRBV7-1A0A0A6YYK4 115 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 ZFP36P26651 326 aaKnown RBP3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 DPH3Q96FX2 82 aa3.29□□□□□ -1.88
DEPDC1-202ENST00000456315 TRAV12-2A0A075B6T6 113 aa3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 TRAV12-3A0A0B4J271 114 aa3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 SOCS3O14543 225 aa3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 TRBV30A0A0K0K1B3 111 aa3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 A8MU10 97 aa3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 M0QY20 66 aa3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 DAZ2Q13117 558 aaKnown RBP3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 PIK3CD-AS1Q5SR53 167 aa3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 C2orf82Q6UX34 121 aa3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 FP248Q71RG6 208 aaPredicted RBP3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 DAZ4Q86SG3 579 aaKnown RBP3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 Q8N6K4 173 aa3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 C16orf95Q9H693 158 aa3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 DAZ1Q9NQZ3 744 aaKnown RBP3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 DAZ3Q9NR90 486 aaKnown RBP3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 KAAG1Q9UBP8 84 aa3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 TIRAPP58753 221 aa3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 SUMO4Q6EEV6 95 aa3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 ASCL5Q7RTU5 278 aa3.28□□□□□ -1.88
DEPDC1-202ENST00000456315 FAM223AQ8IWN6 122 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms