RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 KRTAP9-6A0A140TA67 174 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 CTXND1A0A1B0GTU2 59 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 SCO2A0A1W2PP80 73 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 C5orf52A6NGY3 159 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 COLCA2A8K830 154 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 LTAP01374 205 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 GZMBP10144 247 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 S100A2P29034 98 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 PRR3P79522 188 aaKnown RBP3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 REG3AQ06141 175 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 ZNF674Q2M3X9 581 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 CST9LP1Q5W188 147 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 EIF5AL1Q6IS14 154 aaKnown RBP3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 C15orf56Q8N910 161 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 C20orf203Q8NBC4 194 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 LYPD6BQ8NI32 183 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 ISOC2Q96AB3 205 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 AQP10Q96PS8 301 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 DERL1Q9BUN8 251 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 CYTL1Q9NRR1 136 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 PRR34Q9NV39 138 aa3.78□□□□□ -1.8
HLA-DPA3-207ENST00000454398 IGHV3-64A0A075B6Q5 118 aa3.77□□□□□ -1.81
HLA-DPA3-207ENST00000454398 TRBV6-1A0A0K0K1D8 114 aa3.77□□□□□ -1.81
HLA-DPA3-207ENST00000454398 GAS8-AS1O95177 125 aa3.77□□□□□ -1.81
HLA-DPA3-207ENST00000454398 RAB5AP20339 215 aa3.77□□□□□ -1.81
HLA-DPA3-207ENST00000454398 NDUFA6P56556 154 aa3.77□□□□□ -1.81
HLA-DPA3-207ENST00000454398 RAB4BP61018 213 aa3.77□□□□□ -1.81
HLA-DPA3-207ENST00000454398 COX6A2Q02221 97 aa3.77□□□□□ -1.81
HLA-DPA3-207ENST00000454398 CIRBPQ14011 172 aaKnown RBP3.77□□□□□ -1.81
HLA-DPA3-207ENST00000454398 DNLZQ5SXM8 178 aa3.77□□□□□ -1.81
HLA-DPA3-207ENST00000454398 SPANXN1Q5VSR9 72 aa3.77□□□□□ -1.81
HLA-DPA3-207ENST00000454398 Q6ZRU5 148 aa3.77□□□□□ -1.81
HLA-DPA3-207ENST00000454398 GTSF1Q8WW33 167 aa3.77□□□□□ -1.81
HLA-DPA3-207ENST00000454398 DPH3Q96FX2 82 aa3.77□□□□□ -1.81
HLA-DPA3-207ENST00000454398 FMC1Q96HJ9 113 aa3.77□□□□□ -1.81
HLA-DPA3-207ENST00000454398 KRTAP9-2Q9BYQ4 174 aa3.77□□□□□ -1.81
HLA-DPA3-207ENST00000454398 TRBV25-1A0A075B6N4 114 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 A0A096LNI7 61 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 A0A1B0GV90 55 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 C7orf77A4D0Y5 90 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 PRSS47A8MTI9 375 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 UMAD1C9J7I0 102 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 PAGE4O60829 102 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 MBP02144 154 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 MT-ND4LP03901 98 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 RPS10P46783 165 aaKnown RBP3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 SULT1A2P50226 295 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 CEBPGP53567 150 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 CNBPP62633 177 aaKnown RBP3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 SERF2P84101 59 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 MAJINQ3KP22 176 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 AKR1C8PQ5T2L2 129 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 SUMO4Q6EEV6 95 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 DGAT2L7PQ6IED9 249 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 CFAP161Q6P656 301 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 PRSS3P2Q8NHM4 247 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 LINC00526Q96FQ7 95 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 AP1S3Q96PC3 154 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 EIF5A2Q9GZV4 153 aaKnown RBP3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 PRO1933Q9H354 126 aa3.76□□□□□ -1.81
HLA-DPA3-207ENST00000454398 IGHV1-24A0A0C4DH33 117 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 GAGE12HA6NDE8 117 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 C9JQL5 133 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 SNAI2O43623 268 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 RHEBQ15382 184 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 IQCJQ1A5X6 159 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 PDZD11Q5EBL8 140 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 COX8CQ7Z4L0 72 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 C7orf33Q8WU49 177 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 TMEM243Q9BU79 118 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 DPH3P1Q9H4G8 78 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 AP5S1Q9NUS5 200 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 PLAC8Q9NZF1 115 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 VAX2Q9UIW0 290 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 ZFP30Q9Y2G7 519 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 MUC2Q02817 5179 aa3.75□□□□□ -1.81
HLA-DPA3-207ENST00000454398 BORCS7-ASMTA0A0B4J1R7 106 aa3.74□□□□□ -1.81
HLA-DPA3-207ENST00000454398 TRAV26-2A0A0B4J265 109 aa3.74□□□□□ -1.81
HLA-DPA3-207ENST00000454398 TSTD3H0UI37 97 aa3.74□□□□□ -1.81
HLA-DPA3-207ENST00000454398 M0QY20 66 aa3.74□□□□□ -1.81
HLA-DPA3-207ENST00000454398 SMIM17P0DL12 118 aa3.74□□□□□ -1.81
HLA-DPA3-207ENST00000454398 WDR73Q6P4I2 378 aa3.74□□□□□ -1.81
HLA-DPA3-207ENST00000454398 STPG4Q8N801 248 aa3.74□□□□□ -1.81
HLA-DPA3-207ENST00000454398 OR10D4PQ8NGN7 298 aa3.74□□□□□ -1.81
HLA-DPA3-207ENST00000454398 FAM213BQ8TBF2 198 aa3.74□□□□□ -1.81
HLA-DPA3-207ENST00000454398 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.73□□□□□ -1.81
HLA-DPA3-207ENST00000454398 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.73□□□□□ -1.81
HLA-DPA3-207ENST00000454398 IGKV2-29A2NJV5 120 aaPredicted RBP3.73□□□□□ -1.81
HLA-DPA3-207ENST00000454398 ZNF727A8MUV8 499 aa3.73□□□□□ -1.81
HLA-DPA3-207ENST00000454398 OR5AL1P0C617 328 aa3.73□□□□□ -1.81
HLA-DPA3-207ENST00000454398 AMTP48728 403 aa3.73□□□□□ -1.81
HLA-DPA3-207ENST00000454398 PKIAP61925 76 aa3.73□□□□□ -1.81
HLA-DPA3-207ENST00000454398 CENPWQ5EE01 88 aa3.73□□□□□ -1.81
HLA-DPA3-207ENST00000454398 BAGE2Q86Y30 109 aa3.73□□□□□ -1.81
HLA-DPA3-207ENST00000454398 LINC01600Q96MT4 127 aa3.73□□□□□ -1.81
HLA-DPA3-207ENST00000454398 A0A0J9YXV3 536 aa3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 UBE2L6O14933 153 aa3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 PPP1R2P9O14990 202 aa3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 IGLC6P0CF74 106 aa3.72□□□□□ -1.81
HLA-DPA3-207ENST00000454398 FABP4P15090 132 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms