RNA–Protein interactions for RNA: ENST00000453963.5

SEC16A-207, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SEC16A, Length 4,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-207ENST00000453963 MIR7-3HGQ8N6C7 128 aa9.14□□□□□ -0.95
SEC16A-207ENST00000453963 USP9YO00507 2555 aaPredicted RBP9.13□□□□□ -0.95
SEC16A-207ENST00000453963 PLXNB1O43157 2135 aa9.13□□□□□ -0.95
SEC16A-207ENST00000453963 EP400Q96L91 3159 aa9.13□□□□□ -0.95
SEC16A-207ENST00000453963 PCNX3Q9H6A9 2034 aa9.13□□□□□ -0.95
SEC16A-207ENST00000453963 CXCL5P42830 114 aa9.13□□□□□ -0.95
SEC16A-207ENST00000453963 CCDC140Q96MF4 163 aa9.13□□□□□ -0.95
SEC16A-207ENST00000453963 TRBV10-1A0A0K0K1A3 114 aa9.13□□□□□ -0.95
SEC16A-207ENST00000453963 MAPKAPK5-AS1Q8N8E1 139 aa9.13□□□□□ -0.95
SEC16A-207ENST00000453963 IGHV4-4A0A075B6R2 117 aa9.12□□□□□ -0.95
SEC16A-207ENST00000453963 KIAA1549LQ6ZVL6 1849 aa9.12□□□□□ -0.95
SEC16A-207ENST00000453963 DSCAMO60469 2012 aa9.12□□□□□ -0.95
SEC16A-207ENST00000453963 ODF3BA8MYP8 253 aa9.12□□□□□ -0.95
SEC16A-207ENST00000453963 NDUFA1O15239 70 aa9.12□□□□□ -0.95
SEC16A-207ENST00000453963 IGHV3-30P01768 117 aa9.12□□□□□ -0.95
SEC16A-207ENST00000453963 IGHV3-33P01772 117 aa9.12□□□□□ -0.95
SEC16A-207ENST00000453963 IGHV3-30-5P0DP03 117 aa9.12□□□□□ -0.95
SEC16A-207ENST00000453963 ODF3Q96PU9 254 aa9.12□□□□□ -0.95
SEC16A-207ENST00000453963 HHLA3Q9XRX5 114 aa9.12□□□□□ -0.95
SEC16A-207ENST00000453963 TMEM131Q92545 1883 aa9.12□□□□□ -0.95
SEC16A-207ENST00000453963 TMEM256-PLSCR3K7ERE1 68 aa9.12□□□□□ -0.95
SEC16A-207ENST00000453963 TIRAPP58753 221 aa9.12□□□□□ -0.95
SEC16A-207ENST00000453963 RNF185Q96GF1 192 aa9.11□□□□□ -0.95
SEC16A-207ENST00000453963 HIST2H2BDQ6DRA6 164 aa9.11□□□□□ -0.95
SEC16A-207ENST00000453963 P0DMU3 169 aa9.11□□□□□ -0.95
SEC16A-207ENST00000453963 FAM231AP0DMU4 169 aa9.11□□□□□ -0.95
SEC16A-207ENST00000453963 FAM231CP0DMU5 169 aa9.11□□□□□ -0.95
SEC16A-207ENST00000453963 PDE6GP18545 87 aa9.11□□□□□ -0.95
SEC16A-207ENST00000453963 PRORYQ9H606 182 aa9.11□□□□□ -0.95
SEC16A-207ENST00000453963 TEX49A0A1B0GTD5 131 aa9.1□□□□□ -0.95
SEC16A-207ENST00000453963 UQCRQO14949 82 aa9.1□□□□□ -0.95
SEC16A-207ENST00000453963 IGLV2-11P01706 119 aa9.1□□□□□ -0.95
SEC16A-207ENST00000453963 LMO4P61968 165 aa9.1□□□□□ -0.95
SEC16A-207ENST00000453963 NDUFB1O75438 58 aa9.1□□□□□ -0.95
SEC16A-207ENST00000453963 NREPQ16612 68 aa9.1□□□□□ -0.95
SEC16A-207ENST00000453963 ESM1Q9NQ30 184 aa9.1□□□□□ -0.95
SEC16A-207ENST00000453963 FSTL3O95633 263 aa9.1□□□□□ -0.95
SEC16A-207ENST00000453963 TRBV12-3P01733 135 aa9.1□□□□□ -0.95
SEC16A-207ENST00000453963 DSCAML1Q8TD84 2053 aa9.1□□□□□ -0.95
SEC16A-207ENST00000453963 SPTBN4Q9H254 2564 aa9.1□□□□□ -0.95
SEC16A-207ENST00000453963 ZNF22P17026 224 aaPredicted RBP9.1□□□□□ -0.95
SEC16A-207ENST00000453963 NDUFC2O95298 119 aa9.09□□□□□ -0.95
SEC16A-207ENST00000453963 LINC00310P59036 64 aa9.09□□□□□ -0.95
SEC16A-207ENST00000453963 TRBV30A0A0K0K1B3 111 aa9.09□□□□□ -0.95
SEC16A-207ENST00000453963 TMEM223A0PJW6 202 aa9.09□□□□□ -0.95
SEC16A-207ENST00000453963 ZNF462Q96JM2 2506 aa9.09□□□□□ -0.96
SEC16A-207ENST00000453963 CEMP1Q6PRD7 247 aaPredicted RBP9.08□□□□□ -0.96
SEC16A-207ENST00000453963 CLPSL1A2RUU4 121 aa9.08□□□□□ -0.96
SEC16A-207ENST00000453963 SPAG11BQ08648 103 aa9.08□□□□□ -0.96
SEC16A-207ENST00000453963 A6NDX4 124 aa9.08□□□□□ -0.96
SEC16A-207ENST00000453963 C4orf3Q8WVX3 66 aa9.07□□□□□ -0.96
SEC16A-207ENST00000453963 C14orf132Q9NPU4 83 aa9.07□□□□□ -0.96
SEC16A-207ENST00000453963 SPATA25Q9BR10 227 aa9.07□□□□□ -0.96
SEC16A-207ENST00000453963 INSL3P51460 131 aa9.07□□□□□ -0.96
SEC16A-207ENST00000453963 MP68P56378 58 aa9.07□□□□□ -0.96
SEC16A-207ENST00000453963 DEFB135Q30KP9 77 aa9.07□□□□□ -0.96
SEC16A-207ENST00000453963 C22orf34Q6ZV56 151 aa9.07□□□□□ -0.96
SEC16A-207ENST00000453963 PRO0255Q9UI72 69 aa9.07□□□□□ -0.96
SEC16A-207ENST00000453963 IGLV4-3A0A075B6K6 122 aa9.07□□□□□ -0.96
SEC16A-207ENST00000453963 IGHV4-28A0A0C4DH34 117 aa9.07□□□□□ -0.96
SEC16A-207ENST00000453963 C19orf84I3L1E1 186 aa9.07□□□□□ -0.96
SEC16A-207ENST00000453963 TNFRSF13BO14836 293 aaPredicted RBP9.07□□□□□ -0.96
SEC16A-207ENST00000453963 Q8N976 141 aa9.07□□□□□ -0.96
SEC16A-207ENST00000453963 TMEM263Q8WUH6 116 aaKnown RBP9.07□□□□□ -0.96
SEC16A-207ENST00000453963 EBI3Q14213 229 aa9.06□□□□□ -0.96
SEC16A-207ENST00000453963 ZFAND3Q9H8U3 227 aa9.06□□□□□ -0.96
SEC16A-207ENST00000453963 KLK12Q9UKR0 248 aa9.06□□□□□ -0.96
SEC16A-207ENST00000453963 LRRK2Q5S007 2527 aa9.06□□□□□ -0.96
SEC16A-207ENST00000453963 F8W735 103 aaPredicted RBP9.06□□□□□ -0.96
SEC16A-207ENST00000453963 CFAP126Q5VTH2 177 aa9.06□□□□□ -0.96
SEC16A-207ENST00000453963 ZFAND2AQ8N6M9 145 aa9.06□□□□□ -0.96
SEC16A-207ENST00000453963 TRIAP1O43715 76 aa9.05□□□□□ -0.96
SEC16A-207ENST00000453963 IGF1P05019 195 aa9.05□□□□□ -0.96
SEC16A-207ENST00000453963 DIRC1Q969H9 104 aa9.05□□□□□ -0.96
SEC16A-207ENST00000453963 SMAD5-AS1Q9Y6J3 95 aa9.05□□□□□ -0.96
SEC16A-207ENST00000453963 LY6LH3BQJ8 138 aa9.05□□□□□ -0.96
SEC16A-207ENST00000453963 CDKN2A-AS1Q9UH64 79 aa9.05□□□□□ -0.96
SEC16A-207ENST00000453963 FASNP49327 2511 aaKnown RBP9.05□□□□□ -0.96
SEC16A-207ENST00000453963 TNRC6BQ9UPQ9 1833 aaKnown RBP9.04□□□□□ -0.96
SEC16A-207ENST00000453963 FN1P02751 2386 aaKnown RBP9.04□□□□□ -0.96
SEC16A-207ENST00000453963 TRBV6-5A0A0K0K1A5 114 aa9.04□□□□□ -0.96
SEC16A-207ENST00000453963 TRBV27A0A0K0K1C4 114 aa9.04□□□□□ -0.96
SEC16A-207ENST00000453963 LINC01548A6NM66 108 aa9.04□□□□□ -0.96
SEC16A-207ENST00000453963 NCR3O14931 201 aa9.04□□□□□ -0.96
SEC16A-207ENST00000453963 NRACQ8N912 160 aa9.04□□□□□ -0.96
SEC16A-207ENST00000453963 UBE2AP49459 152 aa9.04□□□□□ -0.96
SEC16A-207ENST00000453963 K7EQG2 157 aa9.03□□□□□ -0.96
SEC16A-207ENST00000453963 LINC00308Q8TCZ7 52 aa9.03□□□□□ -0.96
SEC16A-207ENST00000453963 M0QY20 66 aa9.03□□□□□ -0.96
SEC16A-207ENST00000453963 HIGD2BQ4VC39 106 aa9.03□□□□□ -0.96
SEC16A-207ENST00000453963 ATP5EP2Q5VTU8 51 aa9.03□□□□□ -0.96
SEC16A-207ENST00000453963 C20orf173Q96LM9 149 aa9.03□□□□□ -0.96
SEC16A-207ENST00000453963 PRRC2AP48634 2157 aaKnown RBP9.03□□□□□ -0.96
SEC16A-207ENST00000453963 LRRC75A-AS1Q8N1F1 130 aa9.03□□□□□ -0.96
SEC16A-207ENST00000453963 C3orf22Q8N5N4 141 aa9.03□□□□□ -0.96
SEC16A-207ENST00000453963 IMUPQ9GZP8 106 aa9.03□□□□□ -0.96
SEC16A-207ENST00000453963 PYGO1Q9Y3Y4 419 aa9.02□□□□□ -0.96
SEC16A-207ENST00000453963 MAP6D1Q9H9H5 199 aa9.02□□□□□ -0.97
SEC16A-207ENST00000453963 DEFB4AO15263 64 aa9.02□□□□□ -0.97
SEC16A-207ENST00000453963 LINC00467Q9BRT7 94 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 108.7 ms