RNA–Protein interactions for RNA: ENST00000453551.6

PUF60-203, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 1 (best) BASIC

Gene PUF60, Length 1,842 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-203ENST00000453551 ESM1Q9NQ30 184 aa15.34■□□□□ 0.05
PUF60-203ENST00000453551 UBE2D4Q9Y2X8 147 aa15.34■□□□□ 0.05
PUF60-203ENST00000453551 SORL1Q92673 2214 aa15.34■□□□□ 0.05
PUF60-203ENST00000453551 UBE2D3P61077 147 aa15.33■□□□□ 0.05
PUF60-203ENST00000453551 UBE2D2P62837 147 aa15.33■□□□□ 0.05
PUF60-203ENST00000453551 TINCRA0A1B0GVN0 87 aa15.33■□□□□ 0.04
PUF60-203ENST00000453551 STHQ8IWL8 128 aa15.33■□□□□ 0.04
PUF60-203ENST00000453551 C1orf158Q8N1D5 194 aa15.33■□□□□ 0.04
PUF60-203ENST00000453551 H3BMG7 143 aa15.32■□□□□ 0.04
PUF60-203ENST00000453551 GAGE13Q4V321 117 aa15.32■□□□□ 0.04
PUF60-203ENST00000453551 TIMM21Q9BVV7 248 aa15.32■□□□□ 0.04
PUF60-203ENST00000453551 KRTAP1-1Q07627 177 aa15.31■□□□□ 0.04
PUF60-203ENST00000453551 TSSC4Q9Y5U2 329 aaPredicted RBP15.31■□□□□ 0.04
PUF60-203ENST00000453551 MAP1AP78559 2803 aaPredicted RBP15.31■□□□□ 0.04
PUF60-203ENST00000453551 CFC1BP0CG36 223 aa15.31■□□□□ 0.04
PUF60-203ENST00000453551 CFC1P0CG37 223 aa15.31■□□□□ 0.04
PUF60-203ENST00000453551 COTL1Q14019 142 aa15.31■□□□□ 0.04
PUF60-203ENST00000453551 TEX48A0A1B0GUV7 120 aa15.3■□□□□ 0.04
PUF60-203ENST00000453551 TMEM238C9JI98 176 aa15.3■□□□□ 0.04
PUF60-203ENST00000453551 RNASE1P07998 156 aaKnown RBP15.3■□□□□ 0.04
PUF60-203ENST00000453551 WFDC2Q14508 124 aa15.3■□□□□ 0.04
PUF60-203ENST00000453551 MXRA5Q9NR99 2828 aa15.3■□□□□ 0.04
PUF60-203ENST00000453551 C10orf126Q8N4M7 172 aa15.29■□□□□ 0.04
PUF60-203ENST00000453551 XCL2Q9UBD3 114 aa15.29■□□□□ 0.04
PUF60-203ENST00000453551 Q9UF83 564 aa15.29■□□□□ 0.04
PUF60-203ENST00000453551 IGHV1-58A0A0C4DH39 117 aa15.29■□□□□ 0.04
PUF60-203ENST00000453551 IGHV3-30-3P0DP02 117 aa15.29■□□□□ 0.04
PUF60-203ENST00000453551 AZU1P20160 251 aa15.29■□□□□ 0.04
PUF60-203ENST00000453551 RPL24P83731 157 aaKnown RBP15.29■□□□□ 0.04
PUF60-203ENST00000453551 FAM110AQ9BQ89 295 aa15.29■□□□□ 0.04
PUF60-203ENST00000453551 APOMO95445 188 aa15.28■□□□□ 0.04
PUF60-203ENST00000453551 A0A0B4J2C4 111 aa15.27■□□□□ 0.04
PUF60-203ENST00000453551 A0A0J9YXY3 114 aa15.27■□□□□ 0.04
PUF60-203ENST00000453551 TRBV10-1A0A0K0K1A3 114 aa15.27■□□□□ 0.04
PUF60-203ENST00000453551 PRO1854Q9UHT4 67 aa15.27■□□□□ 0.04
PUF60-203ENST00000453551 CITED2Q99967 270 aaPredicted RBP15.27■□□□□ 0.03
PUF60-203ENST00000453551 HIST2H2BDQ6DRA6 164 aa15.26■□□□□ 0.03
PUF60-203ENST00000453551 CEMP1Q6PRD7 247 aaPredicted RBP15.26■□□□□ 0.03
PUF60-203ENST00000453551 TRBV20-1A0A075B6N2 111 aa15.25■□□□□ 0.03
PUF60-203ENST00000453551 J3QR89 54 aa15.25■□□□□ 0.03
PUF60-203ENST00000453551 TIRAPP58753 221 aa15.25■□□□□ 0.03
PUF60-203ENST00000453551 Q6ZUT4 128 aa15.25■□□□□ 0.03
PUF60-203ENST00000453551 LINC01006Q8NI28 216 aa15.25■□□□□ 0.03
PUF60-203ENST00000453551 TMEM263Q8WUH6 116 aaKnown RBP15.25■□□□□ 0.03
PUF60-203ENST00000453551 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.24■□□□□ 0.03
PUF60-203ENST00000453551 IGLV5-45A0A087WSX0 123 aa15.24■□□□□ 0.03
PUF60-203ENST00000453551 A0A1W2PRX2 142 aa15.24■□□□□ 0.03
PUF60-203ENST00000453551 IGKV2-29A2NJV5 120 aaPredicted RBP15.24■□□□□ 0.03
PUF60-203ENST00000453551 ATP6V0E2Q8NHE4 81 aa15.24■□□□□ 0.03
PUF60-203ENST00000453551 VSIG2Q96IQ7 327 aa15.24■□□□□ 0.03
PUF60-203ENST00000453551 CSMD2Q7Z408 3487 aa15.24■□□□□ 0.03
PUF60-203ENST00000453551 ABCA12Q86UK0 2595 aa15.24■□□□□ 0.03
PUF60-203ENST00000453551 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.24■□□□□ 0.03
PUF60-203ENST00000453551 TRAV4A0A0B4J268 109 aa15.23■□□□□ 0.03
PUF60-203ENST00000453551 A4D1N5 150 aa15.23■□□□□ 0.03
PUF60-203ENST00000453551 LITAFQ99732 161 aa15.23■□□□□ 0.03
PUF60-203ENST00000453551 TEX15Q9BXT5 2789 aa15.22■□□□□ 0.03
PUF60-203ENST00000453551 IGHV3-64A0A075B6Q5 118 aa15.22■□□□□ 0.03
PUF60-203ENST00000453551 FAM19A3Q7Z5A8 133 aa15.22■□□□□ 0.03
PUF60-203ENST00000453551 SPANXDQ9BXN6 97 aa15.22■□□□□ 0.03
PUF60-203ENST00000453551 SPANXCQ9NY87 97 aa15.22■□□□□ 0.03
PUF60-203ENST00000453551 TRGV1A0A0A0MS02 117 aa15.22■□□□□ 0.03
PUF60-203ENST00000453551 MUSTN1Q8IVN3 82 aa15.22■□□□□ 0.03
PUF60-203ENST00000453551 C11orf44Q8N8P7 122 aa15.22■□□□□ 0.03
PUF60-203ENST00000453551 LOC107984156A0A0G2JMH3 177 aa15.21■□□□□ 0.03
PUF60-203ENST00000453551 DAZ2Q13117 558 aaKnown RBP15.21■□□□□ 0.03
PUF60-203ENST00000453551 C21orf62-AS1Q17RA5 79 aa15.21■□□□□ 0.03
PUF60-203ENST00000453551 ARL17AQ8IVW1 177 aa15.21■□□□□ 0.03
PUF60-203ENST00000453551 YAE1D1Q9NRH1 226 aa15.21■□□□□ 0.03
PUF60-203ENST00000453551 CSDC2Q9Y534 153 aaKnown RBP15.21■□□□□ 0.03
PUF60-203ENST00000453551 IGHV3-38A0A0C4DH36 116 aa15.2■□□□□ 0.02
PUF60-203ENST00000453551 K7EQD1 137 aa15.2■□□□□ 0.02
PUF60-203ENST00000453551 IGLV1-51P01701 117 aa15.2■□□□□ 0.02
PUF60-203ENST00000453551 IGHV3-33P01772 117 aa15.2■□□□□ 0.02
PUF60-203ENST00000453551 ETDBQ3ZM63 59 aa15.2■□□□□ 0.02
PUF60-203ENST00000453551 ZFAND6Q6FIF0 208 aa15.2■□□□□ 0.02
PUF60-203ENST00000453551 EIF4EBP3O60516 100 aaPredicted RBP15.2■□□□□ 0.02
PUF60-203ENST00000453551 CIDEAO60543 219 aa15.2■□□□□ 0.02
PUF60-203ENST00000453551 TIMM17BO60830 172 aa15.2■□□□□ 0.02
PUF60-203ENST00000453551 RPL36AP83881 106 aaKnown RBP15.2■□□□□ 0.02
PUF60-203ENST00000453551 DAZ4Q86SG3 579 aaKnown RBP15.2■□□□□ 0.02
PUF60-203ENST00000453551 SBSPONQ8IVN8 264 aa15.2■□□□□ 0.02
PUF60-203ENST00000453551 RPL36ALQ969Q0 106 aaKnown RBP15.2■□□□□ 0.02
PUF60-203ENST00000453551 DAZ3Q9NR90 486 aaKnown RBP15.2■□□□□ 0.02
PUF60-203ENST00000453551 NDUFA12Q9UI09 145 aa15.2■□□□□ 0.02
PUF60-203ENST00000453551 TRAV8-3A0A0A6YYJ7 113 aa15.19■□□□□ 0.02
PUF60-203ENST00000453551 NDUFA7O95182 113 aa15.19■□□□□ 0.02
PUF60-203ENST00000453551 PSMB2P49721 201 aa15.19■□□□□ 0.02
PUF60-203ENST00000453551 RNASE13Q5GAN3 156 aaKnown RBP15.19■□□□□ 0.02
PUF60-203ENST00000453551 RNF183Q96D59 192 aa15.19■□□□□ 0.02
PUF60-203ENST00000453551 GEMIN7Q9H840 131 aaKnown RBP15.19■□□□□ 0.02
PUF60-203ENST00000453551 GIG44P09565 113 aaPredicted RBP15.18■□□□□ 0.02
PUF60-203ENST00000453551 SMCPP49901 116 aaPredicted RBP15.18■□□□□ 0.02
PUF60-203ENST00000453551 SMAGPQ0VAQ4 97 aa15.18■□□□□ 0.02
PUF60-203ENST00000453551 SH2D6Q7Z4S9 175 aa15.18■□□□□ 0.02
PUF60-203ENST00000453551 CENPEQ02224 2701 aa15.18■□□□□ 0.02
PUF60-203ENST00000453551 APCP25054 2843 aa15.18■□□□□ 0.02
PUF60-203ENST00000453551 KMT2BQ9UMN6 2715 aaPredicted RBP15.18■□□□□ 0.02
PUF60-203ENST00000453551 IGHV3OR16-12A0A075B7B8 117 aa15.17■□□□□ 0.02
PUF60-203ENST00000453551 C16orf74Q96GX8 76 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 238.9 ms