RNA–Protein interactions for RNA: ENST00000453441.1

COL28A1-205, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 2

Gene COL28A1, Length 700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-205ENST00000453441 Q9H8V8 135 aa5.98□□□□□ -1.45
COL28A1-205ENST00000453441 RPS10P5Q9NQ39 176 aa5.98□□□□□ -1.45
COL28A1-205ENST00000453441 PHOX2AO14813 284 aa5.97□□□□□ -1.45
COL28A1-205ENST00000453441 NCR2O95944 276 aa5.97□□□□□ -1.45
COL28A1-205ENST00000453441 DNAH10OSP0CZ25 163 aa5.97□□□□□ -1.45
COL28A1-205ENST00000453441 OR10J3Q5JRS4 329 aa5.97□□□□□ -1.45
COL28A1-205ENST00000453441 AMN1Q8IY45 258 aa5.97□□□□□ -1.45
COL28A1-205ENST00000453441 C10orf126Q8N4M7 172 aa5.97□□□□□ -1.45
COL28A1-205ENST00000453441 RNF185Q96GF1 192 aa5.97□□□□□ -1.45
COL28A1-205ENST00000453441 CHCHD7Q9BUK0 85 aa5.97□□□□□ -1.45
COL28A1-205ENST00000453441 LAMTOR2Q9Y2Q5 125 aa5.97□□□□□ -1.45
COL28A1-205ENST00000453441 TRBV6-8A0A0A6YYG3 113 aa5.96□□□□□ -1.46
COL28A1-205ENST00000453441 IGHV3-38A0A0C4DH36 116 aa5.96□□□□□ -1.46
COL28A1-205ENST00000453441 NBDYA0A0U1RRE5 68 aa5.96□□□□□ -1.46
COL28A1-205ENST00000453441 TCAPO15273 167 aa5.96□□□□□ -1.46
COL28A1-205ENST00000453441 MT-ND6P03923 174 aa5.96□□□□□ -1.46
COL28A1-205ENST00000453441 CKS2P33552 79 aa5.96□□□□□ -1.46
COL28A1-205ENST00000453441 LINC01556Q5JQF7 62 aa5.96□□□□□ -1.46
COL28A1-205ENST00000453441 C20orf78Q9BR46 151 aa5.96□□□□□ -1.46
COL28A1-205ENST00000453441 ST20Q9HBF5 79 aa5.96□□□□□ -1.46
COL28A1-205ENST00000453441 RYR3Q15413 4870 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 HYDINQ4G0P3 5121 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 TRBV24-1A0A075B6N3 115 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 TRBV25-1A0A075B6N4 114 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 TRAV26-2A0A0B4J265 109 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 IGHV1-24A0A0C4DH33 117 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 HLA-DQA1P01909 254 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 RPL32P62910 135 aaKnown RBP5.95□□□□□ -1.46
COL28A1-205ENST00000453441 KMT2AQ03164 3969 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 COTL1Q14019 142 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 ELOBQ15370 118 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 IQCJQ1A5X6 159 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 MRPL51Q4U2R6 128 aaKnown RBP5.95□□□□□ -1.46
COL28A1-205ENST00000453441 Q6ZR54 194 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 SLC7A5P1Q8MH63 180 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 ORMDL3Q8N138 153 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 GNB1LQ9BYB4 327 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 Q9UF83 564 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 URGCP-MRPS24S4R325 110 aa5.95□□□□□ -1.46
COL28A1-205ENST00000453441 TRBV27A0A0K0K1C4 114 aa5.94□□□□□ -1.46
COL28A1-205ENST00000453441 SDHAF1A6NFY7 115 aa5.94□□□□□ -1.46
COL28A1-205ENST00000453441 I3L3M4 83 aa5.94□□□□□ -1.46
COL28A1-205ENST00000453441 VCYO14598 125 aa5.94□□□□□ -1.46
COL28A1-205ENST00000453441 SUMO2P61956 95 aaKnown RBP5.94□□□□□ -1.46
COL28A1-205ENST00000453441 C21orf62-AS1Q17RA5 79 aa5.94□□□□□ -1.46
COL28A1-205ENST00000453441 WFDC10BQ8IUB3 73 aa5.94□□□□□ -1.46
COL28A1-205ENST00000453441 RPL39LQ96EH5 51 aaKnown RBP5.94□□□□□ -1.46
COL28A1-205ENST00000453441 TMEM70Q9BUB7 260 aa5.94□□□□□ -1.46
COL28A1-205ENST00000453441 KRTAP4-5Q9BYR2 181 aa5.94□□□□□ -1.46
COL28A1-205ENST00000453441 IGLV2-18A0A075B6J9 118 aa5.93□□□□□ -1.46
COL28A1-205ENST00000453441 D6R8Y8 96 aa5.93□□□□□ -1.46
COL28A1-205ENST00000453441 H7C423 109 aa5.93□□□□□ -1.46
COL28A1-205ENST00000453441 APCSP02743 223 aa5.93□□□□□ -1.46
COL28A1-205ENST00000453441 PMCHP20382 165 aa5.93□□□□□ -1.46
COL28A1-205ENST00000453441 POLR2KP53803 58 aaKnown RBP5.93□□□□□ -1.46
COL28A1-205ENST00000453441 SMAGPQ0VAQ4 97 aa5.93□□□□□ -1.46
COL28A1-205ENST00000453441 LAGE3Q14657 143 aa5.93□□□□□ -1.46
COL28A1-205ENST00000453441 TMEM136Q6ZRR5 245 aa5.93□□□□□ -1.46
COL28A1-205ENST00000453441 NFE4Q86UQ8 179 aa5.93□□□□□ -1.46
COL28A1-205ENST00000453441 NRACQ8N912 160 aa5.93□□□□□ -1.46
COL28A1-205ENST00000453441 KIR2DL4Q99706 377 aa5.93□□□□□ -1.46
COL28A1-205ENST00000453441 TMEM243Q9BU79 118 aa5.93□□□□□ -1.46
COL28A1-205ENST00000453441 SMCO4Q9NRQ5 59 aa5.93□□□□□ -1.46
COL28A1-205ENST00000453441 A0A087WX48 190 aa5.92□□□□□ -1.46
COL28A1-205ENST00000453441 TNFRSF6BO95407 300 aa5.92□□□□□ -1.46
COL28A1-205ENST00000453441 RPS10P46783 165 aaKnown RBP5.92□□□□□ -1.46
COL28A1-205ENST00000453441 AMTP48728 403 aa5.92□□□□□ -1.46
COL28A1-205ENST00000453441 LINC00336Q6ZUF6 198 aa5.92□□□□□ -1.46
COL28A1-205ENST00000453441 NIT1Q86X76 327 aa5.92□□□□□ -1.46
COL28A1-205ENST00000453441 PRELID3AQ96N28 172 aa5.92□□□□□ -1.46
COL28A1-205ENST00000453441 CHCHD5Q9BSY4 110 aa5.92□□□□□ -1.46
COL28A1-205ENST00000453441 PRSS47A8MTI9 375 aa5.91□□□□□ -1.46
COL28A1-205ENST00000453441 SMKR1H3BMG3 65 aa5.91□□□□□ -1.46
COL28A1-205ENST00000453441 K7EMI3 77 aa5.91□□□□□ -1.46
COL28A1-205ENST00000453441 UBE2L6O14933 153 aa5.91□□□□□ -1.46
COL28A1-205ENST00000453441 C1orf134Q5TEV5 83 aa5.91□□□□□ -1.46
COL28A1-205ENST00000453441 NTM-AS1Q6ZSK4 140 aa5.91□□□□□ -1.46
COL28A1-205ENST00000453441 C6orf223Q8N319 242 aa5.91□□□□□ -1.46
COL28A1-205ENST00000453441 SMIM2Q9BVW6 85 aa5.91□□□□□ -1.46
COL28A1-205ENST00000453441 MAP1LC3AQ9H492 121 aa5.91□□□□□ -1.46
COL28A1-205ENST00000453441 TRAV8-3A0A0A6YYJ7 113 aa5.9□□□□□ -1.46
COL28A1-205ENST00000453441 A0A1B0GUV1 79 aa5.9□□□□□ -1.46
COL28A1-205ENST00000453441 IBA57-AS1B1ANH7 110 aa5.9□□□□□ -1.46
COL28A1-205ENST00000453441 TMEM262E9PQX1 116 aa5.9□□□□□ -1.46
COL28A1-205ENST00000453441 M0R2N4 97 aa5.9□□□□□ -1.46
COL28A1-205ENST00000453441 ZNF25P17030 456 aaPredicted RBP5.9□□□□□ -1.46
COL28A1-205ENST00000453441 FCER1GP30273 86 aa5.9□□□□□ -1.46
COL28A1-205ENST00000453441 TMEM18Q96B42 140 aa5.9□□□□□ -1.46
COL28A1-205ENST00000453441 RMI2Q96E14 147 aa5.9□□□□□ -1.46
COL28A1-205ENST00000453441 DNAH10Q8IVF4 4471 aa5.89□□□□□ -1.47
COL28A1-205ENST00000453441 TGIF2-C20orf24A0A0A6YYL0 155 aa5.89□□□□□ -1.47
COL28A1-205ENST00000453441 GAS8-AS1O95177 125 aa5.89□□□□□ -1.47
COL28A1-205ENST00000453441 TSHBP01222 138 aa5.89□□□□□ -1.47
COL28A1-205ENST00000453441 NPYP01303 97 aa5.89□□□□□ -1.47
COL28A1-205ENST00000453441 G0S2P27469 103 aa5.89□□□□□ -1.47
COL28A1-205ENST00000453441 Q0VG73 95 aa5.89□□□□□ -1.47
COL28A1-205ENST00000453441 NXT2Q9NPJ8 142 aaKnown RBP5.89□□□□□ -1.47
COL28A1-205ENST00000453441 COX11Q9Y6N1 276 aa5.89□□□□□ -1.47
COL28A1-205ENST00000453441 IGHV3-30P01768 117 aa5.88□□□□□ -1.47
COL28A1-205ENST00000453441 IGHV3-33P01772 117 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms