RNA–Protein interactions for RNA: ENST00000452483.1

HMGB3P21-201, Transcript of high mobility group box 3 pseudogene 21, humanhuman

BASIC

Gene HMGB3P21, Length 547 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P21-201ENST00000452483 UNC79Q9P2D8 2635 aa2.51□□□□□ -2.01
HMGB3P21-201ENST00000452483 IGKV3-7A0A075B6H7 116 aa2.51□□□□□ -2.01
HMGB3P21-201ENST00000452483 TRBV6-7A0A0A0MS04 114 aa2.51□□□□□ -2.01
HMGB3P21-201ENST00000452483 LOC285095A0A1B0GVY8 99 aa2.51□□□□□ -2.01
HMGB3P21-201ENST00000452483 HIGD1CA8MV81 97 aa2.51□□□□□ -2.01
HMGB3P21-201ENST00000452483 F8WEM9 126 aa2.51□□□□□ -2.01
HMGB3P21-201ENST00000452483 PPYP01298 95 aa2.51□□□□□ -2.01
HMGB3P21-201ENST00000452483 HMGN2P05204 90 aaKnown RBP2.51□□□□□ -2.01
HMGB3P21-201ENST00000452483 SSBP1Q04837 148 aaKnown RBP2.51□□□□□ -2.01
HMGB3P21-201ENST00000452483 C20orf197Q8N268 126 aa2.51□□□□□ -2.01
HMGB3P21-201ENST00000452483 CDC42SE2Q9NRR3 84 aa2.51□□□□□ -2.01
HMGB3P21-201ENST00000452483 NDUFA4L2Q9NRX3 87 aa2.51□□□□□ -2.01
HMGB3P21-201ENST00000452483 ZGRF1Q86YA3 2104 aa2.51□□□□□ -2.01
HMGB3P21-201ENST00000452483 MPDZO75970 2070 aa2.51□□□□□ -2.01
HMGB3P21-201ENST00000452483 COL16A1Q07092 1604 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P21-201ENST00000452483 MED12LQ86YW9 2145 aa2.5□□□□□ -2.01
HMGB3P21-201ENST00000452483 LTBP2Q14767 1821 aa2.5□□□□□ -2.01
HMGB3P21-201ENST00000452483 HMGN4O00479 90 aa2.5□□□□□ -2.01
HMGB3P21-201ENST00000452483 PPP1R17O96001 155 aa2.5□□□□□ -2.01
HMGB3P21-201ENST00000452483 DNAL4O96015 105 aa2.5□□□□□ -2.01
HMGB3P21-201ENST00000452483 SPINK14Q6IE38 97 aa2.5□□□□□ -2.01
HMGB3P21-201ENST00000452483 TP53TG3Q9ULZ0 132 aa2.5□□□□□ -2.01
HMGB3P21-201ENST00000452483 LENEPQ9Y5L5 61 aa2.5□□□□□ -2.01
HMGB3P21-201ENST00000452483 V9GYH0 126 aa2.5□□□□□ -2.01
HMGB3P21-201ENST00000452483 RGPD8O14715 1765 aaPredicted RBP2.5□□□□□ -2.01
HMGB3P21-201ENST00000452483 RGPD5Q99666 1765 aa2.5□□□□□ -2.01
HMGB3P21-201ENST00000452483 UBR1Q8IWV7 1749 aa2.5□□□□□ -2.01
HMGB3P21-201ENST00000452483 MED13Q9UHV7 2174 aa2.5□□□□□ -2.01
HMGB3P21-201ENST00000452483 CCDC180Q9P1Z9 1646 aa2.5□□□□□ -2.01
HMGB3P21-201ENST00000452483 TRBV6-4A0A1B0GX49 114 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 A8MU10 97 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 IQCF6A8MYZ5 107 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 JMJD7-PLA2G4BH0Y9G9 81 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 IGHV3-30P01768 117 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 IGHV3-30-5P0DP03 117 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 SPAG11BQ08648 103 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 TPRXLQ17RH7 258 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 LCE3CQ5T5A8 94 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 SPAG11AQ6PDA7 123 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 KRTAP11-1Q8IUC1 163 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 KRTAP4-3Q9BYR4 195 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 TMEM14BQ9NUH8 114 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 LRRC9Q6ZRR7 1453 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 ADAMTS7Q9UKP4 1686 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 STRCP1A6NGW2 1772 aa2.49□□□□□ -2.01
HMGB3P21-201ENST00000452483 DLG5Q8TDM6 1919 aa2.48□□□□□ -2.01
HMGB3P21-201ENST00000452483 NEXMIFQ5QGS0 1516 aa2.48□□□□□ -2.01
HMGB3P21-201ENST00000452483 COL4A6Q14031 1691 aa2.48□□□□□ -2.01
HMGB3P21-201ENST00000452483 IGKV2-28A0A075B6P5 120 aa2.48□□□□□ -2.01
HMGB3P21-201ENST00000452483 MYMXA0A1B0GTQ4 84 aa2.48□□□□□ -2.01
HMGB3P21-201ENST00000452483 CLPSL1A2RUU4 121 aa2.48□□□□□ -2.01
HMGB3P21-201ENST00000452483 IGKV2D-28P01615 120 aa2.48□□□□□ -2.01
HMGB3P21-201ENST00000452483 IGLV6-57P01721 117 aa2.48□□□□□ -2.01
HMGB3P21-201ENST00000452483 SFTA3P0C7M3 94 aa2.48□□□□□ -2.01
HMGB3P21-201ENST00000452483 C6orf201Q7Z4U5 140 aa2.48□□□□□ -2.01
HMGB3P21-201ENST00000452483 WFDC10AQ9H1F0 79 aa2.48□□□□□ -2.01
HMGB3P21-201ENST00000452483 PRR34Q9NV39 138 aa2.48□□□□□ -2.01
HMGB3P21-201ENST00000452483 KLK9Q9UKQ9 250 aa2.48□□□□□ -2.01
HMGB3P21-201ENST00000452483 ARL2-SNX15V9GYD0 113 aa2.48□□□□□ -2.01
HMGB3P21-201ENST00000452483 RGPD2P0DJD1 1756 aa2.48□□□□□ -2.01
HMGB3P21-201ENST00000452483 A0A1B0GWA3 101 aa2.47□□□□□ -2.01
HMGB3P21-201ENST00000452483 SAA2P0DJI9 122 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P21-201ENST00000452483 PDE6GP18545 87 aa2.47□□□□□ -2.01
HMGB3P21-201ENST00000452483 PLGLAQ15195 96 aa2.47□□□□□ -2.01
HMGB3P21-201ENST00000452483 XAF1Q6GPH4 301 aa2.47□□□□□ -2.01
HMGB3P21-201ENST00000452483 SPACA4Q8TDM5 124 aa2.47□□□□□ -2.01
HMGB3P21-201ENST00000452483 PSENENQ9NZ42 101 aa2.47□□□□□ -2.01
HMGB3P21-201ENST00000452483 SEC16AO15027 2179 aa2.47□□□□□ -2.01
HMGB3P21-201ENST00000452483 HMGXB3Q12766 1538 aa2.47□□□□□ -2.01
HMGB3P21-201ENST00000452483 LMTK2Q8IWU2 1503 aa2.47□□□□□ -2.01
HMGB3P21-201ENST00000452483 ZNF142P52746 1687 aaPredicted RBP2.47□□□□□ -2.01
HMGB3P21-201ENST00000452483 PREX2Q70Z35 1606 aa2.46□□□□□ -2.02
HMGB3P21-201ENST00000452483 LOC101927531A0A1B0GV80 90 aa2.46□□□□□ -2.02
HMGB3P21-201ENST00000452483 A0A1B0GVY2 172 aa2.46□□□□□ -2.02
HMGB3P21-201ENST00000452483 FAM223BA6NKX1 122 aa2.46□□□□□ -2.02
HMGB3P21-201ENST00000452483 CEBPZOSA8MTT3 80 aa2.46□□□□□ -2.02
HMGB3P21-201ENST00000452483 IGLV3-1P01715 115 aa2.46□□□□□ -2.02
HMGB3P21-201ENST00000452483 FAM74A4Q5TZK3 123 aa2.46□□□□□ -2.02
HMGB3P21-201ENST00000452483 COX7B2Q8TF08 81 aa2.46□□□□□ -2.02
HMGB3P21-201ENST00000452483 ANAPC11Q9NYG5 84 aa2.46□□□□□ -2.02
HMGB3P21-201ENST00000452483 COL4A5P29400 1685 aa2.46□□□□□ -2.02
HMGB3P21-201ENST00000452483 KIAA0100Q14667 2235 aaKnown RBP2.46□□□□□ -2.02
HMGB3P21-201ENST00000452483 KDM3BQ7LBC6 1761 aa2.46□□□□□ -2.02
HMGB3P21-201ENST00000452483 ESPL1Q14674 2120 aa2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 NRXN2Q9P2S2 1712 aa2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 AFDNP55196 1824 aaKnown RBP2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 OBSCNQ5VST9 7968 aa2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 CEP192Q8TEP8 1941 aa2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 LRCOL1A6NCL2 159 aa2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 KRTAP9-6A8MVA2 160 aa2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 H3BRN7 92 aa2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 LEPROTL1O95214 131 aa2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 CCL3L1P16619 93 aa2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 SPINT3P49223 89 aa2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 DEFB121Q5J5C9 76 aa2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 C10orf55Q5SWW7 151 aa2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 R4GMQ9 66 aa2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 TARBP1Q13395 1621 aaKnown RBP2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 PDCD11Q14690 1871 aaKnown RBP2.45□□□□□ -2.02
HMGB3P21-201ENST00000452483 DIP2CQ9Y2E4 1556 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms