RNA–Protein interactions for RNA: ENST00000451506.5

PTPRN-209, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-209ENST00000451506 LYPD6BQ8NI32 183 aa10.81□□□□□ -0.68
PTPRN-209ENST00000451506 DPH3Q96FX2 82 aa10.81□□□□□ -0.68
PTPRN-209ENST00000451506 AP1S3Q96PC3 154 aa10.81□□□□□ -0.68
PTPRN-209ENST00000451506 TNXBP22105 4242 aa10.81□□□□□ -0.68
PTPRN-209ENST00000451506 TRBV20OR9-2A0A075B6H5 130 aa10.8□□□□□ -0.68
PTPRN-209ENST00000451506 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.8□□□□□ -0.68
PTPRN-209ENST00000451506 C19orf71A6NCJ1 209 aa10.8□□□□□ -0.68
PTPRN-209ENST00000451506 NDUFS6O75380 124 aaKnown RBP10.8□□□□□ -0.68
PTPRN-209ENST00000451506 SMIM17P0DL12 118 aa10.8□□□□□ -0.68
PTPRN-209ENST00000451506 OR2D3Q8NGH3 330 aa10.8□□□□□ -0.68
PTPRN-209ENST00000451506 GFRA4Q9GZZ7 299 aa10.8□□□□□ -0.68
PTPRN-209ENST00000451506 PLAC8Q9NZF1 115 aa10.8□□□□□ -0.68
PTPRN-209ENST00000451506 IGLV4-60A0A075B6I1 120 aa10.79□□□□□ -0.68
PTPRN-209ENST00000451506 A0A1B0GUV1 79 aa10.79□□□□□ -0.68
PTPRN-209ENST00000451506 A0A1B0GVG6 124 aa10.79□□□□□ -0.68
PTPRN-209ENST00000451506 RAB19A4D1S5 217 aa10.79□□□□□ -0.68
PTPRN-209ENST00000451506 FER1L6-AS1Q8NA97 138 aa10.79□□□□□ -0.68
PTPRN-209ENST00000451506 AP5S1Q9NUS5 200 aa10.79□□□□□ -0.68
PTPRN-209ENST00000451506 PHOX2AO14813 284 aa10.78□□□□□ -0.68
PTPRN-209ENST00000451506 GZMBP10144 247 aa10.78□□□□□ -0.68
PTPRN-209ENST00000451506 NKX2-5P52952 324 aaPredicted RBP10.78□□□□□ -0.68
PTPRN-209ENST00000451506 CACNG7P62955 275 aa10.78□□□□□ -0.68
PTPRN-209ENST00000451506 F2Z2F3 143 aa10.77□□□□□ -0.69
PTPRN-209ENST00000451506 IGLC6P0CF74 106 aa10.77□□□□□ -0.69
PTPRN-209ENST00000451506 SUMO4Q6EEV6 95 aa10.77□□□□□ -0.69
PTPRN-209ENST00000451506 TMEM243Q9BU79 118 aa10.77□□□□□ -0.69
PTPRN-209ENST00000451506 H7C1H1 209 aa10.76□□□□□ -0.69
PTPRN-209ENST00000451506 LINC01600Q96MT4 127 aa10.76□□□□□ -0.69
PTPRN-209ENST00000451506 MGPP08493 103 aa10.75□□□□□ -0.69
PTPRN-209ENST00000451506 C15orf56Q8N910 161 aa10.75□□□□□ -0.69
PTPRN-209ENST00000451506 C7orf33Q8WU49 177 aa10.75□□□□□ -0.69
PTPRN-209ENST00000451506 TPPP3Q9BW30 176 aa10.75□□□□□ -0.69
PTPRN-209ENST00000451506 TRGC1P0CF51 173 aa10.74□□□□□ -0.69
PTPRN-209ENST00000451506 CTRLP40313 264 aa10.74□□□□□ -0.69
PTPRN-209ENST00000451506 COX6A2Q02221 97 aa10.74□□□□□ -0.69
PTPRN-209ENST00000451506 PGLYRP4Q96LB8 373 aa10.74□□□□□ -0.69
PTPRN-209ENST00000451506 DPH3P1Q9H4G8 78 aa10.74□□□□□ -0.69
PTPRN-209ENST00000451506 RPP21Q9H633 154 aaKnown RBP10.74□□□□□ -0.69
PTPRN-209ENST00000451506 ODF1Q14990 250 aa10.73□□□□□ -0.69
PTPRN-209ENST00000451506 RASL11AQ6T310 242 aa10.73□□□□□ -0.69
PTPRN-209ENST00000451506 FAM210AQ96ND0 272 aa10.73□□□□□ -0.69
PTPRN-209ENST00000451506 EIF5A2Q9GZV4 153 aaKnown RBP10.73□□□□□ -0.69
PTPRN-209ENST00000451506 PRR3P79522 188 aaKnown RBP10.72□□□□□ -0.69
PTPRN-209ENST00000451506 WDR73Q6P4I2 378 aa10.72□□□□□ -0.69
PTPRN-209ENST00000451506 NUDT10Q8NFP7 164 aa10.72□□□□□ -0.69
PTPRN-209ENST00000451506 NUDT11Q96G61 164 aa10.72□□□□□ -0.69
PTPRN-209ENST00000451506 CNFNQ9BYD5 112 aa10.72□□□□□ -0.69
PTPRN-209ENST00000451506 GAGE12HA6NDE8 117 aa10.71□□□□□ -0.69
PTPRN-209ENST00000451506 K7EN84 100 aa10.71□□□□□ -0.69
PTPRN-209ENST00000451506 RPS10P46783 165 aaKnown RBP10.71□□□□□ -0.69
PTPRN-209ENST00000451506 FAM231DQ6ZW35 169 aa10.71□□□□□ -0.69
PTPRN-209ENST00000451506 PRSS3P2Q8NHM4 247 aa10.71□□□□□ -0.69
PTPRN-209ENST00000451506 OCC1Q8TAD7 63 aa10.71□□□□□ -0.69
PTPRN-209ENST00000451506 SMIM7Q9BQ49 75 aa10.71□□□□□ -0.69
PTPRN-209ENST00000451506 MAJINQ3KP22 176 aa10.7□□□□□ -0.7
PTPRN-209ENST00000451506 CT83Q5H943 113 aa10.7□□□□□ -0.7
PTPRN-209ENST00000451506 CFAP161Q6P656 301 aa10.7□□□□□ -0.7
PTPRN-209ENST00000451506 GTSF1Q8WW33 167 aa10.7□□□□□ -0.7
PTPRN-209ENST00000451506 RNASE7Q9H1E1 156 aaKnown RBP10.7□□□□□ -0.7
PTPRN-209ENST00000451506 NIT2Q9NQR4 276 aa10.7□□□□□ -0.7
PTPRN-209ENST00000451506 IGKV2-24A0A0C4DH68 120 aa10.69□□□□□ -0.7
PTPRN-209ENST00000451506 UBE2L6O14933 153 aa10.69□□□□□ -0.7
PTPRN-209ENST00000451506 AMTP48728 403 aa10.69□□□□□ -0.7
PTPRN-209ENST00000451506 CEBPGP53567 150 aa10.69□□□□□ -0.7
PTPRN-209ENST00000451506 LYZL1Q6UWQ5 148 aa10.69□□□□□ -0.7
PTPRN-209ENST00000451506 A0A0J9YXV3 536 aa10.68□□□□□ -0.7
PTPRN-209ENST00000451506 COTL1Q14019 142 aa10.68□□□□□ -0.7
PTPRN-209ENST00000451506 HIGD2BQ4VC39 106 aa10.68□□□□□ -0.7
PTPRN-209ENST00000451506 STPG4Q8N801 248 aa10.68□□□□□ -0.7
PTPRN-209ENST00000451506 ZNF727A8MUV8 499 aa10.67□□□□□ -0.7
PTPRN-209ENST00000451506 A8MWL6 223 aa10.67□□□□□ -0.7
PTPRN-209ENST00000451506 GATCO43716 136 aaKnown RBP10.67□□□□□ -0.7
PTPRN-209ENST00000451506 KRTAP10-8P60410 259 aa10.67□□□□□ -0.7
PTPRN-209ENST00000451506 TEX261Q6UWH6 196 aa10.67□□□□□ -0.7
PTPRN-209ENST00000451506 GVQW2A0A096LPI5 108 aaPredicted RBP10.66□□□□□ -0.7
PTPRN-209ENST00000451506 NTF3P20783 257 aa10.66□□□□□ -0.7
PTPRN-209ENST00000451506 FAM74A3Q4VXF1 159 aa10.66□□□□□ -0.7
PTPRN-209ENST00000451506 SMIM15Q7Z3B0 74 aa10.66□□□□□ -0.7
PTPRN-209ENST00000451506 SMDT1Q9H4I9 107 aa10.66□□□□□ -0.7
PTPRN-209ENST00000451506 A0A096LNI7 61 aa10.65□□□□□ -0.7
PTPRN-209ENST00000451506 IGKV3OR2-268A0A0C4DH90 116 aa10.65□□□□□ -0.7
PTPRN-209ENST00000451506 SRP19P09132 144 aaKnown RBP10.65□□□□□ -0.7
PTPRN-209ENST00000451506 TWIST1Q15672 202 aa10.65□□□□□ -0.7
PTPRN-209ENST00000451506 LINC01551Q86U37 167 aa10.65□□□□□ -0.7
PTPRN-209ENST00000451506 CHCHD10Q8WYQ3 142 aaPredicted RBP10.65□□□□□ -0.7
PTPRN-209ENST00000451506 BORCS7Q96B45 105 aa10.65□□□□□ -0.7
PTPRN-209ENST00000451506 SPINK6Q6UWN8 80 aa10.64□□□□□ -0.71
PTPRN-209ENST00000451506 FAM231BA6NCW3 169 aa10.63□□□□□ -0.71
PTPRN-209ENST00000451506 OSTCQ9NRP0 149 aa10.63□□□□□ -0.71
PTPRN-209ENST00000451506 FOXI1Q12951 378 aa10.62□□□□□ -0.71
PTPRN-209ENST00000451506 SRSF9Q13242 221 aaKnown RBP eCLIP10.62□□□□□ -0.71
PTPRN-209ENST00000451506 PEA15Q15121 130 aa10.62□□□□□ -0.71
PTPRN-209ENST00000451506 REG3GQ6UW15 175 aa10.62□□□□□ -0.71
PTPRN-209ENST00000451506 GATD1Q8NB37 220 aa10.62□□□□□ -0.71
PTPRN-209ENST00000451506 FOXA3P55318 350 aaPredicted RBP10.61□□□□□ -0.71
PTPRN-209ENST00000451506 TSKUQ8WUA8 353 aa10.61□□□□□ -0.71
PTPRN-209ENST00000451506 LINC00474Q9P2X8 69 aa10.61□□□□□ -0.71
PTPRN-209ENST00000451506 TRAV26-2A0A0B4J265 109 aa10.6□□□□□ -0.71
PTPRN-209ENST00000451506 TMEM241Q24JQ0 296 aa10.6□□□□□ -0.71
PTPRN-209ENST00000451506 AMMECR1LQ6DCA0 310 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms