RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 TRBV12-3P01733 135 aa10.55□□□□□ -0.72
ITGB4-202ENST00000449880 NDUFA1O15239 70 aa10.55□□□□□ -0.72
ITGB4-202ENST00000449880 MED13Q9UHV7 2174 aa10.55□□□□□ -0.72
ITGB4-202ENST00000449880 SVIPQ8NHG7 77 aa10.55□□□□□ -0.72
ITGB4-202ENST00000449880 PROP1O75360 226 aa10.54□□□□□ -0.72
ITGB4-202ENST00000449880 H7C423 109 aa10.54□□□□□ -0.72
ITGB4-202ENST00000449880 PTPRQQ9UMZ3 2332 aa10.54□□□□□ -0.72
ITGB4-202ENST00000449880 C20orf197Q8N268 126 aa10.54□□□□□ -0.72
ITGB4-202ENST00000449880 SHANK1Q9Y566 2161 aa10.54□□□□□ -0.72
ITGB4-202ENST00000449880 ZFHX2Q9C0A1 2572 aaPredicted RBP10.54□□□□□ -0.72
ITGB4-202ENST00000449880 TRAV23DV6A0A075B6W5 121 aa10.54□□□□□ -0.72
ITGB4-202ENST00000449880 IGHV4OR15-8A0A075B7B6 117 aa10.54□□□□□ -0.72
ITGB4-202ENST00000449880 A0A087WW49 117 aa10.54□□□□□ -0.72
ITGB4-202ENST00000449880 CLPSL1A2RUU4 121 aa10.54□□□□□ -0.72
ITGB4-202ENST00000449880 F8W735 103 aaPredicted RBP10.54□□□□□ -0.72
ITGB4-202ENST00000449880 CCDC179H3BU77 68 aa10.54□□□□□ -0.72
ITGB4-202ENST00000449880 SDIM1Q6ZPB5 146 aa10.53□□□□□ -0.72
ITGB4-202ENST00000449880 ZGRF1Q86YA3 2104 aa10.53□□□□□ -0.72
ITGB4-202ENST00000449880 A0A0J9YX75 114 aa10.53□□□□□ -0.72
ITGB4-202ENST00000449880 NDUFB1O75438 58 aa10.53□□□□□ -0.72
ITGB4-202ENST00000449880 FREM1Q5H8C1 2179 aa10.53□□□□□ -0.72
ITGB4-202ENST00000449880 SMAD5-AS1Q9Y6J3 95 aa10.53□□□□□ -0.72
ITGB4-202ENST00000449880 IGLV10-54A0A075B6I4 117 aa10.53□□□□□ -0.72
ITGB4-202ENST00000449880 LST1O00453 97 aa10.53□□□□□ -0.72
ITGB4-202ENST00000449880 INSL3P51460 131 aa10.53□□□□□ -0.72
ITGB4-202ENST00000449880 MRPS36P82909 103 aaKnown RBP10.53□□□□□ -0.72
ITGB4-202ENST00000449880 CLUHP3Q96NS8 147 aa10.52□□□□□ -0.72
ITGB4-202ENST00000449880 MRPL55Q7Z7F7 128 aaKnown RBP10.52□□□□□ -0.73
ITGB4-202ENST00000449880 PYGO1Q9Y3Y4 419 aa10.52□□□□□ -0.73
ITGB4-202ENST00000449880 IGLV2-11P01706 119 aa10.52□□□□□ -0.73
ITGB4-202ENST00000449880 TRBV6-5A0A0K0K1A5 114 aa10.52□□□□□ -0.73
ITGB4-202ENST00000449880 IL17DQ8TAD2 202 aa10.52□□□□□ -0.73
ITGB4-202ENST00000449880 HHLA3Q9XRX5 114 aa10.52□□□□□ -0.73
ITGB4-202ENST00000449880 LINC00308Q8TCZ7 52 aa10.51□□□□□ -0.73
ITGB4-202ENST00000449880 TNRC6BQ9UPQ9 1833 aaKnown RBP10.51□□□□□ -0.73
ITGB4-202ENST00000449880 CRIP1P50238 77 aa10.51□□□□□ -0.73
ITGB4-202ENST00000449880 Q8N7P7 452 aa10.51□□□□□ -0.73
ITGB4-202ENST00000449880 C22orf34Q6ZV56 151 aa10.51□□□□□ -0.73
ITGB4-202ENST00000449880 C4orf3Q8WVX3 66 aa10.51□□□□□ -0.73
ITGB4-202ENST00000449880 IGLV4-3A0A075B6K6 122 aa10.5□□□□□ -0.73
ITGB4-202ENST00000449880 C4orf48Q5BLP8 95 aa10.5□□□□□ -0.73
ITGB4-202ENST00000449880 FSTL3O95633 263 aa10.5□□□□□ -0.73
ITGB4-202ENST00000449880 NCR3O14931 201 aa10.5□□□□□ -0.73
ITGB4-202ENST00000449880 UBE2AP49459 152 aa10.5□□□□□ -0.73
ITGB4-202ENST00000449880 FAM110AQ9BQ89 295 aa10.5□□□□□ -0.73
ITGB4-202ENST00000449880 IGHV4-4A0A075B6R2 117 aa10.49□□□□□ -0.73
ITGB4-202ENST00000449880 Q6JHZ5 121 aa10.49□□□□□ -0.73
ITGB4-202ENST00000449880 ZFP36P26651 326 aaKnown RBP10.49□□□□□ -0.73
ITGB4-202ENST00000449880 COX7BP24311 80 aa10.49□□□□□ -0.73
ITGB4-202ENST00000449880 TMEM263Q8WUH6 116 aaKnown RBP10.49□□□□□ -0.73
ITGB4-202ENST00000449880 NRGNQ92686 78 aa10.49□□□□□ -0.73
ITGB4-202ENST00000449880 M0QXV9 152 aa10.49□□□□□ -0.73
ITGB4-202ENST00000449880 PLCE1Q9P212 2302 aa10.48□□□□□ -0.73
ITGB4-202ENST00000449880 IBA57-AS1B1ANH7 110 aa10.48□□□□□ -0.73
ITGB4-202ENST00000449880 NRACQ8N912 160 aa10.48□□□□□ -0.73
ITGB4-202ENST00000449880 TRBV27A0A0K0K1C4 114 aa10.48□□□□□ -0.73
ITGB4-202ENST00000449880 CNFNQ9BYD5 112 aa10.48□□□□□ -0.73
ITGB4-202ENST00000449880 ESM1Q9NQ30 184 aa10.48□□□□□ -0.73
ITGB4-202ENST00000449880 DEFB135Q30KP9 77 aa10.48□□□□□ -0.73
ITGB4-202ENST00000449880 USP17L23D6RBM5 183 aa10.47□□□□□ -0.73
ITGB4-202ENST00000449880 MUC6Q6W4X9 2439 aa10.47□□□□□ -0.73
ITGB4-202ENST00000449880 ODF3BA8MYP8 253 aa10.47□□□□□ -0.73
ITGB4-202ENST00000449880 PLA2G5P39877 138 aa10.47□□□□□ -0.73
ITGB4-202ENST00000449880 CHKB-CPT1BH3BT56 60 aa10.47□□□□□ -0.73
ITGB4-202ENST00000449880 BPY2O14599 106 aa10.46□□□□□ -0.73
ITGB4-202ENST00000449880 SIRPDQ9H106 197 aa10.46□□□□□ -0.74
ITGB4-202ENST00000449880 CCDC140Q96MF4 163 aa10.46□□□□□ -0.74
ITGB4-202ENST00000449880 C1orf229Q6ZS94 237 aaPredicted RBP10.45□□□□□ -0.74
ITGB4-202ENST00000449880 LINC00526Q96FQ7 95 aa10.45□□□□□ -0.74
ITGB4-202ENST00000449880 NOTCH2Q04721 2471 aa10.45□□□□□ -0.74
ITGB4-202ENST00000449880 TTC28Q96AY4 2481 aa10.45□□□□□ -0.74
ITGB4-202ENST00000449880 ENHOQ6UWT2 76 aa10.45□□□□□ -0.74
ITGB4-202ENST00000449880 PRO0255Q9UI72 69 aa10.45□□□□□ -0.74
ITGB4-202ENST00000449880 SPAG11BQ08648 103 aa10.44□□□□□ -0.74
ITGB4-202ENST00000449880 ACACBO00763 2458 aa10.44□□□□□ -0.74
ITGB4-202ENST00000449880 ZFAND2AQ8N6M9 145 aa10.44□□□□□ -0.74
ITGB4-202ENST00000449880 URB1-AS1Q96HZ7 61 aa10.44□□□□□ -0.74
ITGB4-202ENST00000449880 PRORYQ9H606 182 aa10.44□□□□□ -0.74
ITGB4-202ENST00000449880 SMIM9A6NGZ8 99 aa10.43□□□□□ -0.74
ITGB4-202ENST00000449880 C20orf173Q96LM9 149 aa10.43□□□□□ -0.74
ITGB4-202ENST00000449880 M0QY20 66 aa10.43□□□□□ -0.74
ITGB4-202ENST00000449880 KLK12Q9UKR0 248 aa10.43□□□□□ -0.74
ITGB4-202ENST00000449880 COL5A1P20908 1838 aaPredicted RBP10.43□□□□□ -0.74
ITGB4-202ENST00000449880 SMIM26A0A096LP01 95 aa10.43□□□□□ -0.74
ITGB4-202ENST00000449880 A6NDX4 124 aa10.43□□□□□ -0.74
ITGB4-202ENST00000449880 DYSFO75923 2080 aa10.43□□□□□ -0.74
ITGB4-202ENST00000449880 IGHV4-28A0A0C4DH34 117 aa10.42□□□□□ -0.74
ITGB4-202ENST00000449880 LINC00694P0DN24 101 aa10.42□□□□□ -0.74
ITGB4-202ENST00000449880 C14orf177Q52M58 125 aa10.42□□□□□ -0.74
ITGB4-202ENST00000449880 CDKN2A-AS1Q9UH64 79 aa10.42□□□□□ -0.74
ITGB4-202ENST00000449880 HIVEP2P31629 2446 aa10.42□□□□□ -0.74
ITGB4-202ENST00000449880 UBE2D3P61077 147 aa10.42□□□□□ -0.74
ITGB4-202ENST00000449880 UBE2D2P62837 147 aa10.42□□□□□ -0.74
ITGB4-202ENST00000449880 PIK3CD-AS1Q5SR53 167 aa10.42□□□□□ -0.74
ITGB4-202ENST00000449880 BDP1A6H8Y1 2624 aa10.42□□□□□ -0.74
ITGB4-202ENST00000449880 TNFRSF13BO14836 293 aaPredicted RBP10.42□□□□□ -0.74
ITGB4-202ENST00000449880 NACAE9PAV3 2078 aa10.42□□□□□ -0.74
ITGB4-202ENST00000449880 UBE2D1P51668 147 aa10.42□□□□□ -0.74
ITGB4-202ENST00000449880 SERP1Q9Y6X1 66 aa10.42□□□□□ -0.74
ITGB4-202ENST00000449880 MED12LQ86YW9 2145 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms