RNA–Protein interactions for RNA: ENST00000449058.6

TOM1-210, Transcript of target of myb1 membrane trafficking protein, human

APPRIS P3 TSL 1 (best) BASIC

Gene TOM1, Length 2,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1-210	ENST00000449058	INS	P01308	110 aa		12.3	□□□□□ -0.44
TOM1-210	ENST00000449058	CFC1B	P0CG36	223 aa		12.3	□□□□□ -0.44
TOM1-210	ENST00000449058	CFC1	P0CG37	223 aa		12.3	□□□□□ -0.44
TOM1-210	ENST00000449058	UBE2D3	P61077	147 aa		12.3	□□□□□ -0.44
TOM1-210	ENST00000449058	UBE2D2	P62837	147 aa		12.3	□□□□□ -0.44
TOM1-210	ENST00000449058	LINC01587	Q99440	93 aa		12.3	□□□□□ -0.44
TOM1-210	ENST00000449058	SPX	Q9BT56	116 aa		12.3	□□□□□ -0.44
TOM1-210	ENST00000449058	MRPS36	P82909	103 aa	Known RBP	12.29	□□□□□ -0.44
TOM1-210	ENST00000449058	HIST2H2BD	Q6DRA6	164 aa		12.29	□□□□□ -0.44
TOM1-210	ENST00000449058	CHCHD7	Q9BUK0	85 aa		12.29	□□□□□ -0.44
TOM1-210	ENST00000449058	IGHV3-53	P01767	116 aa		12.28	□□□□□ -0.44
TOM1-210	ENST00000449058	ETDB	Q3ZM63	59 aa		12.28	□□□□□ -0.44
TOM1-210	ENST00000449058	SH2D6	Q7Z4S9	175 aa		12.28	□□□□□ -0.44
TOM1-210	ENST00000449058	MYO9A	B2RTY4	2548 aa		12.28	□□□□□ -0.44
TOM1-210	ENST00000449058	IGHV3-64	A0A075B6Q5	118 aa		12.27	□□□□□ -0.44
TOM1-210	ENST00000449058	ODF3L2	Q3SX64	289 aa		12.27	□□□□□ -0.44
TOM1-210	ENST00000449058	CEMP1	Q6PRD7	247 aa	Predicted RBP	12.27	□□□□□ -0.44
TOM1-210	ENST00000449058	MTURN	Q8N3F0	131 aa		12.27	□□□□□ -0.44
TOM1-210	ENST00000449058	DNAJC30	Q96LL9	226 aa		12.27	□□□□□ -0.44
TOM1-210	ENST00000449058	RS1	O15537	224 aa		12.27	□□□□□ -0.45
TOM1-210	ENST00000449058	C10orf126	Q8N4M7	172 aa		12.27	□□□□□ -0.45
TOM1-210	ENST00000449058	SPANXA1	Q9NS26	97 aa		12.27	□□□□□ -0.45
TOM1-210	ENST00000449058	APC	P25054	2843 aa		12.26	□□□□□ -0.45
TOM1-210	ENST00000449058	TRAV25	A0A0B4J276	109 aa		12.26	□□□□□ -0.45
TOM1-210	ENST00000449058	DNAJC9-AS1	A6NH13	148 aa		12.26	□□□□□ -0.45
TOM1-210	ENST00000449058	UBE2D4	Q9Y2X8	147 aa		12.26	□□□□□ -0.45
TOM1-210	ENST00000449058	LOC107984156	A0A0G2JMH3	177 aa		12.26	□□□□□ -0.45
TOM1-210	ENST00000449058	FHL3	Q13643	280 aa		12.26	□□□□□ -0.45
TOM1-210	ENST00000449058	ARL17A	Q8IVW1	177 aa		12.26	□□□□□ -0.45
TOM1-210	ENST00000449058	IGHV3-30-3	P0DP02	117 aa		12.25	□□□□□ -0.45
TOM1-210	ENST00000449058	LYRM7	Q5U5X0	104 aa		12.25	□□□□□ -0.45
TOM1-210	ENST00000449058	TEX29	Q8N6K0	151 aa		12.25	□□□□□ -0.45
TOM1-210	ENST00000449058	PRO1854	Q9UHT4	67 aa		12.25	□□□□□ -0.45
TOM1-210	ENST00000449058	TIMM21	Q9BVV7	248 aa		12.25	□□□□□ -0.45
TOM1-210	ENST00000449058	SFTA2	Q6UW10	78 aa		12.24	□□□□□ -0.45
TOM1-210	ENST00000449058		A0A0J9YXY3	114 aa		12.23	□□□□□ -0.45
TOM1-210	ENST00000449058	TINCR	A0A1B0GVN0	87 aa		12.23	□□□□□ -0.45
TOM1-210	ENST00000449058		A4D1N5	150 aa		12.23	□□□□□ -0.45
TOM1-210	ENST00000449058		J3QR89	54 aa		12.23	□□□□□ -0.45
TOM1-210	ENST00000449058	AZU1	P20160	251 aa		12.23	□□□□□ -0.45
TOM1-210	ENST00000449058	PSMB2	P49721	201 aa		12.23	□□□□□ -0.45
TOM1-210	ENST00000449058	SMCP	P49901	116 aa	Predicted RBP	12.23	□□□□□ -0.45
TOM1-210	ENST00000449058	XCL2	Q9UBD3	114 aa		12.23	□□□□□ -0.45
TOM1-210	ENST00000449058	EIF4EBP3	O60516	100 aa	Predicted RBP	12.23	□□□□□ -0.45
TOM1-210	ENST00000449058	RNASE13	Q5GAN3	156 aa	Known RBP	12.23	□□□□□ -0.45
TOM1-210	ENST00000449058	IL17D	Q8TAD2	202 aa		12.23	□□□□□ -0.45
TOM1-210	ENST00000449058	ITPR3	Q14573	2671 aa		12.23	□□□□□ -0.45
TOM1-210	ENST00000449058	C1orf158	Q8N1D5	194 aa		12.22	□□□□□ -0.45
TOM1-210	ENST00000449058	WFDC11	Q8NEX6	87 aa		12.22	□□□□□ -0.45
TOM1-210	ENST00000449058	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	12.22	□□□□□ -0.45
TOM1-210	ENST00000449058	IGHV1-58	A0A0C4DH39	117 aa		12.22	□□□□□ -0.45
TOM1-210	ENST00000449058	IGKV2-29	A2NJV5	120 aa	Predicted RBP	12.22	□□□□□ -0.45
TOM1-210	ENST00000449058	MUSTN1	Q8IVN3	82 aa		12.22	□□□□□ -0.45
TOM1-210	ENST00000449058	STH	Q8IWL8	128 aa		12.21	□□□□□ -0.45
TOM1-210	ENST00000449058	TMEM263	Q8WUH6	116 aa	Known RBP	12.21	□□□□□ -0.45
TOM1-210	ENST00000449058	ESM1	Q9NQ30	184 aa		12.21	□□□□□ -0.45
TOM1-210	ENST00000449058	AKAP9	Q99996	3911 aa		12.21	□□□□□ -0.45
TOM1-210	ENST00000449058	TRBV20-1	A0A075B6N2	111 aa		12.21	□□□□□ -0.46
TOM1-210	ENST00000449058	TRAV8-3	A0A0A6YYJ7	113 aa		12.21	□□□□□ -0.46
TOM1-210	ENST00000449058		A0A0B4J2C4	111 aa		12.21	□□□□□ -0.46
TOM1-210	ENST00000449058	CCL24	O00175	119 aa		12.21	□□□□□ -0.46
TOM1-210	ENST00000449058		Q6ZUT4	128 aa		12.21	□□□□□ -0.46
TOM1-210	ENST00000449058	LITAF	Q99732	161 aa		12.21	□□□□□ -0.46
TOM1-210	ENST00000449058	CHD6	Q8TD26	2715 aa		12.21	□□□□□ -0.46
TOM1-210	ENST00000449058	IGHV3-38	A0A0C4DH36	116 aa		12.2	□□□□□ -0.46
TOM1-210	ENST00000449058	TCL1B	O95988	128 aa		12.2	□□□□□ -0.46
TOM1-210	ENST00000449058	ATP6V0E2	Q8NHE4	81 aa		12.2	□□□□□ -0.46
TOM1-210	ENST00000449058		A0A1W2PRX2	142 aa		12.2	□□□□□ -0.46
TOM1-210	ENST00000449058	ZNF469	Q96JG9	3925 aa	Predicted RBP	12.2	□□□□□ -0.46
TOM1-210	ENST00000449058	IGHV3-33	P01772	117 aa		12.19	□□□□□ -0.46
TOM1-210	ENST00000449058	C11orf44	Q8N8P7	122 aa		12.19	□□□□□ -0.46
TOM1-210	ENST00000449058	VSIG2	Q96IQ7	327 aa		12.19	□□□□□ -0.46
TOM1-210	ENST00000449058	TSSC4	Q9Y5U2	329 aa	Predicted RBP	12.19	□□□□□ -0.46
TOM1-210	ENST00000449058	TLN2	Q9Y4G6	2542 aa		12.19	□□□□□ -0.46
TOM1-210	ENST00000449058	INSL3	P51460	131 aa		12.19	□□□□□ -0.46
TOM1-210	ENST00000449058	C1QTNF4	Q9BXJ3	329 aa		12.19	□□□□□ -0.46
TOM1-210	ENST00000449058	ADARB2-AS1	A8MUL3	147 aa		12.18	□□□□□ -0.46
TOM1-210	ENST00000449058	KMT2B	Q9UMN6	2715 aa	Predicted RBP	12.18	□□□□□ -0.46
TOM1-210	ENST00000449058	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	12.18	□□□□□ -0.46
TOM1-210	ENST00000449058	GAGE12H	A6NDE8	117 aa		12.17	□□□□□ -0.46
TOM1-210	ENST00000449058	SBSPON	Q8IVN8	264 aa		12.17	□□□□□ -0.46
TOM1-210	ENST00000449058	SPATA25	Q9BR10	227 aa		12.17	□□□□□ -0.46
TOM1-210	ENST00000449058	NDUFA12	Q9UI09	145 aa		12.17	□□□□□ -0.46
TOM1-210	ENST00000449058	IGHV3OR16-12	A0A075B7B8	117 aa		12.16	□□□□□ -0.46
TOM1-210	ENST00000449058		A0A1B0GV72	72 aa		12.16	□□□□□ -0.46
TOM1-210	ENST00000449058	FOXI1	Q12951	378 aa		12.16	□□□□□ -0.46
TOM1-210	ENST00000449058	ZNF418	Q8TF45	676 aa	Predicted RBP	12.16	□□□□□ -0.46
TOM1-210	ENST00000449058	SPANXD	Q9BXN6	97 aa		12.16	□□□□□ -0.46
TOM1-210	ENST00000449058	SPANXC	Q9NY87	97 aa		12.16	□□□□□ -0.46
TOM1-210	ENST00000449058	IGLV5-45	A0A087WSX0	123 aa		12.15	□□□□□ -0.46
TOM1-210	ENST00000449058	TRGV1	A0A0A0MS02	117 aa		12.15	□□□□□ -0.46
TOM1-210	ENST00000449058	SPINK8	P0C7L1	97 aa		12.15	□□□□□ -0.46
TOM1-210	ENST00000449058	CITED2	Q99967	270 aa	Predicted RBP	12.15	□□□□□ -0.46
TOM1-210	ENST00000449058	ERG28	Q9UKR5	140 aa		12.15	□□□□□ -0.46
TOM1-210	ENST00000449058	TIRAP	P58753	221 aa		12.15	□□□□□ -0.46
TOM1-210	ENST00000449058	GEMIN7	Q9H840	131 aa	Known RBP	12.15	□□□□□ -0.46
TOM1-210	ENST00000449058	SCGB1C2	P0DMR2	95 aa		12.14	□□□□□ -0.47
TOM1-210	ENST00000449058	ADAMTSL4-AS1	Q5T5F5	129 aa		12.14	□□□□□ -0.47
TOM1-210	ENST00000449058	ZFAND6	Q6FIF0	208 aa		12.14	□□□□□ -0.47
TOM1-210	ENST00000449058	SON	P18583	2426 aa	Known RBP	12.14	□□□□□ -0.47

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