RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 IGLV4-69A0A075B6H9 119 aa10.8□□□□□ -0.68
SF1-211ENST00000448404 PLA2G2AP14555 144 aa10.8□□□□□ -0.68
SF1-211ENST00000448404 C12orf74Q32Q52 190 aa10.8□□□□□ -0.68
SF1-211ENST00000448404 SFTA2Q6UW10 78 aa10.8□□□□□ -0.68
SF1-211ENST00000448404 TM2D2Q9BX73 214 aa10.8□□□□□ -0.68
SF1-211ENST00000448404 ATRQ13535 2644 aa10.8□□□□□ -0.68
SF1-211ENST00000448404 VCYO14598 125 aa10.8□□□□□ -0.68
SF1-211ENST00000448404 POM121L12Q8N7R1 296 aa10.8□□□□□ -0.68
SF1-211ENST00000448404 ZNRF2Q8NHG8 242 aa10.8□□□□□ -0.68
SF1-211ENST00000448404 SYT8Q8NBV8 401 aa10.79□□□□□ -0.68
SF1-211ENST00000448404 CCL24O00175 119 aa10.79□□□□□ -0.68
SF1-211ENST00000448404 IGHV3-53P01767 116 aa10.79□□□□□ -0.68
SF1-211ENST00000448404 PLNP26678 52 aa10.79□□□□□ -0.68
SF1-211ENST00000448404 TSPEAR-AS2P59090 65 aa10.79□□□□□ -0.68
SF1-211ENST00000448404 TMEM170BQ5T4T1 132 aa10.79□□□□□ -0.68
SF1-211ENST00000448404 OR11H12B2RN74 326 aa10.78□□□□□ -0.68
SF1-211ENST00000448404 OR11H2Q8NH07 326 aa10.78□□□□□ -0.68
SF1-211ENST00000448404 ODF3Q96PU9 254 aa10.78□□□□□ -0.68
SF1-211ENST00000448404 PEMTQ9UBM1 199 aa10.78□□□□□ -0.68
SF1-211ENST00000448404 APOMO95445 188 aa10.78□□□□□ -0.68
SF1-211ENST00000448404 NSUN5P1Q3KNT7 163 aa10.78□□□□□ -0.68
SF1-211ENST00000448404 LINC01006Q8NI28 216 aa10.78□□□□□ -0.68
SF1-211ENST00000448404 HIST1H4GQ99525 98 aa10.78□□□□□ -0.68
SF1-211ENST00000448404 FLNBO75369 2602 aaKnown RBP10.78□□□□□ -0.68
SF1-211ENST00000448404 TRAV12-1A0A0B4J245 112 aa10.77□□□□□ -0.69
SF1-211ENST00000448404 TRBV27A0A0K0K1C4 114 aa10.77□□□□□ -0.69
SF1-211ENST00000448404 SPINK8P0C7L1 97 aa10.77□□□□□ -0.69
SF1-211ENST00000448404 PRO0461Q9UI25 63 aa10.77□□□□□ -0.69
SF1-211ENST00000448404 ZNF815PA8K554 130 aa10.76□□□□□ -0.69
SF1-211ENST00000448404 MT-ATP8P03928 68 aa10.76□□□□□ -0.69
SF1-211ENST00000448404 HIVEP1P15822 2718 aa10.75□□□□□ -0.69
SF1-211ENST00000448404 ADARB2-AS1A8MUL3 147 aa10.75□□□□□ -0.69
SF1-211ENST00000448404 TRGV11A0A075B6L2 103 aa10.75□□□□□ -0.69
SF1-211ENST00000448404 MYMXA0A1B0GTQ4 84 aa10.75□□□□□ -0.69
SF1-211ENST00000448404 RRN3P1Q2M238 152 aa10.75□□□□□ -0.69
SF1-211ENST00000448404 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.74□□□□□ -0.69
SF1-211ENST00000448404 A0A0J9YXV3 536 aa10.74□□□□□ -0.69
SF1-211ENST00000448404 IGKV2-29A2NJV5 120 aaPredicted RBP10.74□□□□□ -0.69
SF1-211ENST00000448404 RPL35AP18077 110 aaKnown RBP10.74□□□□□ -0.69
SF1-211ENST00000448404 FOXI1Q12951 378 aa10.74□□□□□ -0.69
SF1-211ENST00000448404 SCGB1D4Q6XE38 83 aa10.74□□□□□ -0.69
SF1-211ENST00000448404 CDIP1Q9H305 208 aa10.74□□□□□ -0.69
SF1-211ENST00000448404 PMVKQ15126 192 aa10.74□□□□□ -0.69
SF1-211ENST00000448404 TRPT1Q86TN4 253 aaKnown RBP10.74□□□□□ -0.69
SF1-211ENST00000448404 A8MZ25 164 aa10.73□□□□□ -0.69
SF1-211ENST00000448404 J3QKU1 62 aa10.73□□□□□ -0.69
SF1-211ENST00000448404 PPP1R17O96001 155 aa10.73□□□□□ -0.69
SF1-211ENST00000448404 NFE4Q86UQ8 179 aa10.73□□□□□ -0.69
SF1-211ENST00000448404 C11orf72Q8NBR9 251 aa10.73□□□□□ -0.69
SF1-211ENST00000448404 NSD1Q96L73 2696 aaPredicted RBP10.73□□□□□ -0.69
SF1-211ENST00000448404 FHL3Q13643 280 aa10.73□□□□□ -0.69
SF1-211ENST00000448404 CFAP126Q5VTH2 177 aa10.73□□□□□ -0.69
SF1-211ENST00000448404 C1orf158Q8N1D5 194 aa10.73□□□□□ -0.69
SF1-211ENST00000448404 PTH2Q96A98 100 aa10.73□□□□□ -0.69
SF1-211ENST00000448404 STHQ8IWL8 128 aa10.72□□□□□ -0.69
SF1-211ENST00000448404 SPATA3Q8NHX4 192 aa10.72□□□□□ -0.69
SF1-211ENST00000448404 ZNF418Q8TF45 676 aaPredicted RBP10.72□□□□□ -0.69
SF1-211ENST00000448404 RNF183Q96D59 192 aa10.72□□□□□ -0.69
SF1-211ENST00000448404 SS18L2Q9UHA2 77 aa10.72□□□□□ -0.69
SF1-211ENST00000448404 TRBV6-5A0A0K0K1A5 114 aa10.71□□□□□ -0.69
SF1-211ENST00000448404 XGP55808 180 aa10.71□□□□□ -0.69
SF1-211ENST00000448404 C20orf203Q8NBC4 194 aa10.71□□□□□ -0.69
SF1-211ENST00000448404 FAM104AQ969W3 186 aa10.71□□□□□ -0.69
SF1-211ENST00000448404 TRGV1A0A0A0MS02 117 aa10.71□□□□□ -0.69
SF1-211ENST00000448404 I3L3M4 83 aa10.71□□□□□ -0.69
SF1-211ENST00000448404 M0R2P5 195 aa10.71□□□□□ -0.69
SF1-211ENST00000448404 SMCPP49901 116 aaPredicted RBP10.71□□□□□ -0.69
SF1-211ENST00000448404 PGPEP1Q9NXJ5 209 aa10.71□□□□□ -0.7
SF1-211ENST00000448404 TRBV7-3A0A075B6L6 115 aa10.7□□□□□ -0.7
SF1-211ENST00000448404 Q6ZTI0 123 aa10.7□□□□□ -0.7
SF1-211ENST00000448404 C1QTNF4Q9BXJ3 329 aa10.7□□□□□ -0.7
SF1-211ENST00000448404 TNFRSF18Q9Y5U5 241 aa10.7□□□□□ -0.7
SF1-211ENST00000448404 IGLV4-3A0A075B6K6 122 aa10.7□□□□□ -0.7
SF1-211ENST00000448404 TEP1Q99973 2627 aaKnown RBP10.69□□□□□ -0.7
SF1-211ENST00000448404 TRAV8-3A0A0A6YYJ7 113 aa10.69□□□□□ -0.7
SF1-211ENST00000448404 LOC107984156A0A0G2JMH3 177 aa10.69□□□□□ -0.7
SF1-211ENST00000448404 INSP01308 110 aa10.69□□□□□ -0.7
SF1-211ENST00000448404 PSMB2P49721 201 aa10.69□□□□□ -0.7
SF1-211ENST00000448404 CFAP161Q6P656 301 aa10.69□□□□□ -0.7
SF1-211ENST00000448404 Q6ZUT4 128 aa10.69□□□□□ -0.7
SF1-211ENST00000448404 ARL17AQ8IVW1 177 aa10.69□□□□□ -0.7
SF1-211ENST00000448404 SPXQ9BT56 116 aa10.69□□□□□ -0.7
SF1-211ENST00000448404 ZNF415Q09FC8 603 aa10.69□□□□□ -0.7
SF1-211ENST00000448404 SRSF9Q13242 221 aaKnown RBP eCLIP10.69□□□□□ -0.7
SF1-211ENST00000448404 NDUFA7O95182 113 aa10.68□□□□□ -0.7
SF1-211ENST00000448404 KRTAP10-3P60369 221 aa10.68□□□□□ -0.7
SF1-211ENST00000448404 TIMM17AQ99595 171 aa10.68□□□□□ -0.7
SF1-211ENST00000448404 LINC00467Q9BRT7 94 aa10.68□□□□□ -0.7
SF1-211ENST00000448404 TAL2Q16559 108 aa10.67□□□□□ -0.7
SF1-211ENST00000448404 A8MTW9 85 aa10.67□□□□□ -0.7
SF1-211ENST00000448404 RPL32P62910 135 aaKnown RBP10.67□□□□□ -0.7
SF1-211ENST00000448404 TRAV2A0A0B4J234 112 aa10.66□□□□□ -0.7
SF1-211ENST00000448404 LINC01549A6NIU2 74 aa10.66□□□□□ -0.7
SF1-211ENST00000448404 TSPAN13O95857 204 aa10.66□□□□□ -0.7
SF1-211ENST00000448404 GIG44P09565 113 aaPredicted RBP10.66□□□□□ -0.7
SF1-211ENST00000448404 TMEM86BQ8N661 226 aa10.66□□□□□ -0.7
SF1-211ENST00000448404 VCX2Q9H322 139 aa10.66□□□□□ -0.7
SF1-211ENST00000448404 NOP10Q9NPE3 64 aaKnown RBP10.66□□□□□ -0.7
SF1-211ENST00000448404 TMEM141Q96I45 108 aa10.66□□□□□ -0.7
SF1-211ENST00000448404 ZNF22P17026 224 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms