RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 ZFAND2AQ8N6M9 145 aa14.25□□□□□ -0.13
HMGA1-205ENST00000447654 KLK9Q9UKQ9 250 aa14.25□□□□□ -0.13
HMGA1-205ENST00000447654 ZFYVE26Q68DK2 2539 aa14.25□□□□□ -0.13
HMGA1-205ENST00000447654 USP9XQ93008 2570 aaPredicted RBP14.25□□□□□ -0.13
HMGA1-205ENST00000447654 SUMO4Q6EEV6 95 aa14.24□□□□□ -0.13
HMGA1-205ENST00000447654 C9orf139Q6ZV77 190 aa14.24□□□□□ -0.13
HMGA1-205ENST00000447654 ITLN2Q8WWU7 325 aaPredicted RBP14.24□□□□□ -0.13
HMGA1-205ENST00000447654 SPRY2O43597 315 aa14.23□□□□□ -0.13
HMGA1-205ENST00000447654 GNLYP22749 145 aa14.23□□□□□ -0.13
HMGA1-205ENST00000447654 RNASE4P34096 147 aaKnown RBP14.23□□□□□ -0.13
HMGA1-205ENST00000447654 APRG1Q8IVJ8 170 aa14.23□□□□□ -0.13
HMGA1-205ENST00000447654 C4orf26Q17RF5 130 aa14.23□□□□□ -0.13
HMGA1-205ENST00000447654 TRAV13-1A0A0B4J241 112 aa14.22□□□□□ -0.13
HMGA1-205ENST00000447654 IGHV1-58A0A0C4DH39 117 aa14.22□□□□□ -0.13
HMGA1-205ENST00000447654 IGHV3-23P01764 117 aa14.22□□□□□ -0.13
HMGA1-205ENST00000447654 RNASE3P12724 160 aaKnown RBP14.22□□□□□ -0.13
HMGA1-205ENST00000447654 CLPSL1A2RUU4 121 aa14.22□□□□□ -0.13
HMGA1-205ENST00000447654 DAZ2Q13117 558 aaKnown RBP14.22□□□□□ -0.13
HMGA1-205ENST00000447654 ADAMTSL4-AS1Q5T5F5 129 aa14.22□□□□□ -0.13
HMGA1-205ENST00000447654 DAZ4Q86SG3 579 aaKnown RBP14.22□□□□□ -0.13
HMGA1-205ENST00000447654 DAZ1Q9NQZ3 744 aaKnown RBP14.22□□□□□ -0.13
HMGA1-205ENST00000447654 DAZ3Q9NR90 486 aaKnown RBP14.22□□□□□ -0.13
HMGA1-205ENST00000447654 SPG11Q96JI7 2443 aa14.21□□□□□ -0.13
HMGA1-205ENST00000447654 ODF3BA8MYP8 253 aa14.21□□□□□ -0.13
HMGA1-205ENST00000447654 DPM3Q9P2X0 92 aa14.21□□□□□ -0.13
HMGA1-205ENST00000447654 NDUFA12Q9UI09 145 aa14.21□□□□□ -0.13
HMGA1-205ENST00000447654 U3KQE9 123 aa14.21□□□□□ -0.13
HMGA1-205ENST00000447654 A0A0J9YXV3 536 aa14.2□□□□□ -0.14
HMGA1-205ENST00000447654 F8WDY8 70 aa14.2□□□□□ -0.14
HMGA1-205ENST00000447654 OXTP01178 125 aa14.2□□□□□ -0.14
HMGA1-205ENST00000447654 MRPS36P82909 103 aaKnown RBP14.2□□□□□ -0.14
HMGA1-205ENST00000447654 HRCT1Q6UXD1 115 aa14.2□□□□□ -0.14
HMGA1-205ENST00000447654 IGHV3-64A0A075B6Q5 118 aa14.19□□□□□ -0.14
HMGA1-205ENST00000447654 MALP21145 153 aa14.19□□□□□ -0.14
HMGA1-205ENST00000447654 Q6JHZ5 121 aa14.19□□□□□ -0.14
HMGA1-205ENST00000447654 C20orf203Q8NBC4 194 aa14.19□□□□□ -0.14
HMGA1-205ENST00000447654 ZNF415Q09FC8 603 aa14.19□□□□□ -0.14
HMGA1-205ENST00000447654 FAM19A4Q96LR4 140 aa14.19□□□□□ -0.14
HMGA1-205ENST00000447654 JPT2Q9H910 190 aa14.19□□□□□ -0.14
HMGA1-205ENST00000447654 PRO0628Q9UI54 55 aa14.19□□□□□ -0.14
HMGA1-205ENST00000447654 FASNP49327 2511 aaKnown RBP14.18□□□□□ -0.14
HMGA1-205ENST00000447654 MYO18BQ8IUG5 2567 aa14.18□□□□□ -0.14
HMGA1-205ENST00000447654 M0R1W7 72 aa14.18□□□□□ -0.14
HMGA1-205ENST00000447654 TIRAPP58753 221 aa14.18□□□□□ -0.14
HMGA1-205ENST00000447654 VMO1Q7Z5L0 202 aa14.18□□□□□ -0.14
HMGA1-205ENST00000447654 COPS9Q8WXC6 57 aa14.18□□□□□ -0.14
HMGA1-205ENST00000447654 C16orf92Q96LL3 132 aa14.18□□□□□ -0.14
HMGA1-205ENST00000447654 PYGO1Q9Y3Y4 419 aa14.18□□□□□ -0.14
HMGA1-205ENST00000447654 IGLV4-3A0A075B6K6 122 aa14.17□□□□□ -0.14
HMGA1-205ENST00000447654 BEAN1Q3B7T3 259 aa14.17□□□□□ -0.14
HMGA1-205ENST00000447654 CYSTM1Q9H1C7 97 aa14.17□□□□□ -0.14
HMGA1-205ENST00000447654 ABCA2Q9BZC7 2435 aa14.17□□□□□ -0.14
HMGA1-205ENST00000447654 NDUFC2O95298 119 aa14.16□□□□□ -0.14
HMGA1-205ENST00000447654 BAALC-AS2P0C853 105 aa14.16□□□□□ -0.14
HMGA1-205ENST00000447654 NDPQ00604 133 aa14.16□□□□□ -0.14
HMGA1-205ENST00000447654 DSCR8Q96T75 97 aa14.16□□□□□ -0.14
HMGA1-205ENST00000447654 IGHV3OR16-10A0A075B7F0 116 aa14.16□□□□□ -0.14
HMGA1-205ENST00000447654 FAM110DQ8TAY7 271 aaPredicted RBP14.15□□□□□ -0.14
HMGA1-205ENST00000447654 VSIG2Q96IQ7 327 aa14.15□□□□□ -0.14
HMGA1-205ENST00000447654 IGHV3OR16-8A0A075B7F1 116 aa14.15□□□□□ -0.15
HMGA1-205ENST00000447654 DOPEY1Q5JWR5 2465 aa14.15□□□□□ -0.15
HMGA1-205ENST00000447654 Q6ZSV7 163 aa14.14□□□□□ -0.15
HMGA1-205ENST00000447654 BBC3Q96PG8 261 aaPredicted RBP14.14□□□□□ -0.15
HMGA1-205ENST00000447654 GNRH2O43555 120 aa14.13□□□□□ -0.15
HMGA1-205ENST00000447654 OPRPNQ99935 248 aaPredicted RBP14.13□□□□□ -0.15
HMGA1-205ENST00000447654 ZNF580Q9UK33 172 aa14.13□□□□□ -0.15
HMGA1-205ENST00000447654 IGF1P05019 195 aa14.13□□□□□ -0.15
HMGA1-205ENST00000447654 BPESC1Q9GZL8 116 aa14.13□□□□□ -0.15
HMGA1-205ENST00000447654 SIRPDQ9H106 197 aa14.13□□□□□ -0.15
HMGA1-205ENST00000447654 CENPEQ02224 2701 aa14.13□□□□□ -0.15
HMGA1-205ENST00000447654 ADARB2-AS1A8MUL3 147 aa14.12□□□□□ -0.15
HMGA1-205ENST00000447654 F5H697 171 aa14.12□□□□□ -0.15
HMGA1-205ENST00000447654 C15orf32Q32M92 178 aa14.12□□□□□ -0.15
HMGA1-205ENST00000447654 IGHV3-35A0A0C4DH35 117 aa14.12□□□□□ -0.15
HMGA1-205ENST00000447654 IGHV3-66A0A0C4DH42 116 aa14.12□□□□□ -0.15
HMGA1-205ENST00000447654 SYNJ2BPP57105 145 aa14.12□□□□□ -0.15
HMGA1-205ENST00000447654 CIRBPQ14011 172 aaKnown RBP14.12□□□□□ -0.15
HMGA1-205ENST00000447654 C22orf24Q9Y442 160 aa14.12□□□□□ -0.15
HMGA1-205ENST00000447654 TINCRA0A1B0GVN0 87 aa14.11□□□□□ -0.15
HMGA1-205ENST00000447654 Q8N6K4 173 aa14.11□□□□□ -0.15
HMGA1-205ENST00000447654 PSMB8P28062 276 aa14.1□□□□□ -0.15
HMGA1-205ENST00000447654 LMO4P61968 165 aa14.1□□□□□ -0.15
HMGA1-205ENST00000447654 EPM2AB3EWF7 344 aa14.1□□□□□ -0.15
HMGA1-205ENST00000447654 M0QY20 66 aa14.1□□□□□ -0.15
HMGA1-205ENST00000447654 C20orf173Q96LM9 149 aa14.1□□□□□ -0.15
HMGA1-205ENST00000447654 PRRC2AP48634 2157 aaKnown RBP14.1□□□□□ -0.15
HMGA1-205ENST00000447654 OVOL2Q9BRP0 275 aa14.09□□□□□ -0.15
HMGA1-205ENST00000447654 USP17L23D6RBM5 183 aa14.08□□□□□ -0.16
HMGA1-205ENST00000447654 NDUFA1O15239 70 aa14.08□□□□□ -0.16
HMGA1-205ENST00000447654 NPC2P61916 151 aa14.07□□□□□ -0.16
HMGA1-205ENST00000447654 MUC4Q99102 2169 aa14.07□□□□□ -0.16
HMGA1-205ENST00000447654 IGHV7-81A0A0B4J1V7 117 aa14.07□□□□□ -0.16
HMGA1-205ENST00000447654 DNAL4O96015 105 aa14.07□□□□□ -0.16
HMGA1-205ENST00000447654 RNF152Q8N8N0 203 aa14.07□□□□□ -0.16
HMGA1-205ENST00000447654 RPL11P62913 178 aaKnown RBP14.06□□□□□ -0.16
HMGA1-205ENST00000447654 CCDC140Q96MF4 163 aa14.06□□□□□ -0.16
HMGA1-205ENST00000447654 CD28P10747 220 aa14.06□□□□□ -0.16
HMGA1-205ENST00000447654 PFN2P35080 140 aa14.06□□□□□ -0.16
HMGA1-205ENST00000447654 PRIMA1Q86XR5 153 aa14.06□□□□□ -0.16
HMGA1-205ENST00000447654 A0A087WWL8 130 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 110.5 ms