RNA–Protein interactions for RNA: ENST00000447310.5

ZNF550-204, Transcript of zinc finger protein 550, humanhuman

TSL 1 (best)

Gene ZNF550, Length 4,305 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550-204ENST00000447310 MAP1AP78559 2803 aaPredicted RBP8.43□□□□□ -1.06
ZNF550-204ENST00000447310 IGHV3-33P01772 117 aa8.43□□□□□ -1.06
ZNF550-204ENST00000447310 APRG1Q8IVJ8 170 aa8.43□□□□□ -1.06
ZNF550-204ENST00000447310 DSPP15924 2871 aaKnown RBP8.42□□□□□ -1.06
ZNF550-204ENST00000447310 IGHV3-30P01768 117 aa8.42□□□□□ -1.06
ZNF550-204ENST00000447310 IGHV3-30-5P0DP03 117 aa8.42□□□□□ -1.06
ZNF550-204ENST00000447310 GATA3P23771 443 aa8.42□□□□□ -1.06
ZNF550-204ENST00000447310 C3orf56Q8N813 242 aa8.42□□□□□ -1.06
ZNF550-204ENST00000447310 IGHV1-58A0A0C4DH39 117 aa8.42□□□□□ -1.06
ZNF550-204ENST00000447310 LINC01619G3V211 115 aa8.42□□□□□ -1.06
ZNF550-204ENST00000447310 BAALC-AS2P0C853 105 aa8.42□□□□□ -1.06
ZNF550-204ENST00000447310 GPHB5Q86YW7 130 aa8.42□□□□□ -1.06
ZNF550-204ENST00000447310 ELANEP08246 267 aa8.42□□□□□ -1.06
ZNF550-204ENST00000447310 SLURP1P55000 103 aa8.41□□□□□ -1.06
ZNF550-204ENST00000447310 POLR2KP53803 58 aaKnown RBP8.41□□□□□ -1.06
ZNF550-204ENST00000447310 CDSNQ15517 529 aa8.41□□□□□ -1.06
ZNF550-204ENST00000447310 A0A0B4J2C4 111 aa8.41□□□□□ -1.06
ZNF550-204ENST00000447310 IGHV4OR15-8A0A075B7B6 117 aa8.4□□□□□ -1.06
ZNF550-204ENST00000447310 A0A087WW49 117 aa8.4□□□□□ -1.06
ZNF550-204ENST00000447310 M0QY20 66 aa8.4□□□□□ -1.06
ZNF550-204ENST00000447310 MALP21145 153 aa8.4□□□□□ -1.06
ZNF550-204ENST00000447310 CLUHP3Q96NS8 147 aa8.4□□□□□ -1.06
ZNF550-204ENST00000447310 TMEM243Q9BU79 118 aa8.4□□□□□ -1.06
ZNF550-204ENST00000447310 IGLV4-3A0A075B6K6 122 aa8.4□□□□□ -1.06
ZNF550-204ENST00000447310 TRBV27A0A0K0K1C4 114 aa8.4□□□□□ -1.06
ZNF550-204ENST00000447310 TMEM223A0PJW6 202 aa8.4□□□□□ -1.06
ZNF550-204ENST00000447310 LGALS9O00182 355 aa8.4□□□□□ -1.06
ZNF550-204ENST00000447310 DEFB130BP0DP73 79 aa8.4□□□□□ -1.06
ZNF550-204ENST00000447310 DEFB130AP0DP74 79 aa8.4□□□□□ -1.06
ZNF550-204ENST00000447310 C11orf71Q6IPW1 123 aa8.4□□□□□ -1.06
ZNF550-204ENST00000447310 PSMG3-AS1Q96PY0 264 aa8.4□□□□□ -1.06
ZNF550-204ENST00000447310 H3BT86 120 aa8.4□□□□□ -1.07
ZNF550-204ENST00000447310 NFE4Q86UQ8 179 aa8.4□□□□□ -1.07
ZNF550-204ENST00000447310 PRRC2AP48634 2157 aaKnown RBP8.39□□□□□ -1.07
ZNF550-204ENST00000447310 PF4P02776 101 aa8.39□□□□□ -1.07
ZNF550-204ENST00000447310 HTN3P15516 51 aa8.39□□□□□ -1.07
ZNF550-204ENST00000447310 A6NDX4 124 aa8.39□□□□□ -1.07
ZNF550-204ENST00000447310 TRIAP1O43715 76 aa8.39□□□□□ -1.07
ZNF550-204ENST00000447310 UBE2D1P51668 147 aa8.39□□□□□ -1.07
ZNF550-204ENST00000447310 C10orf105Q8TEF2 133 aa8.39□□□□□ -1.07
ZNF550-204ENST00000447310 FRYLO94915 3013 aa8.39□□□□□ -1.07
ZNF550-204ENST00000447310 FAM236AA0A1B0GUQ0 79 aa8.38□□□□□ -1.07
ZNF550-204ENST00000447310 FAM236BA0A1B0GV22 79 aa8.38□□□□□ -1.07
ZNF550-204ENST00000447310 OVOL2Q9BRP0 275 aa8.38□□□□□ -1.07
ZNF550-204ENST00000447310 FLNBO75369 2602 aaKnown RBP8.38□□□□□ -1.07
ZNF550-204ENST00000447310 IGIPA6NJ69 53 aa8.38□□□□□ -1.07
ZNF550-204ENST00000447310 A8MZ25 164 aa8.38□□□□□ -1.07
ZNF550-204ENST00000447310 NDUFV3P56181 108 aaKnown RBP8.38□□□□□ -1.07
ZNF550-204ENST00000447310 VSIG2Q96IQ7 327 aa8.38□□□□□ -1.07
ZNF550-204ENST00000447310 FRYQ5TBA9 3013 aa8.38□□□□□ -1.07
ZNF550-204ENST00000447310 NXPH4O95158 308 aa8.38□□□□□ -1.07
ZNF550-204ENST00000447310 S100A7L2Q5SY68 101 aa8.38□□□□□ -1.07
ZNF550-204ENST00000447310 NRGNQ92686 78 aa8.38□□□□□ -1.07
ZNF550-204ENST00000447310 TRAV13-2A0A0B4J235 113 aa8.38□□□□□ -1.07
ZNF550-204ENST00000447310 MIAQ16674 131 aa8.38□□□□□ -1.07
ZNF550-204ENST00000447310 PROK1P58294 105 aa8.37□□□□□ -1.07
ZNF550-204ENST00000447310 NSUN5P1Q3KNT7 163 aa8.37□□□□□ -1.07
ZNF550-204ENST00000447310 CDKN2A-AS1Q9UH64 79 aa8.37□□□□□ -1.07
ZNF550-204ENST00000447310 VPREB3Q9UKI3 123 aa8.37□□□□□ -1.07
ZNF550-204ENST00000447310 TINCRA0A1B0GVN0 87 aa8.37□□□□□ -1.07
ZNF550-204ENST00000447310 PRB1P04280 392 aa8.37□□□□□ -1.07
ZNF550-204ENST00000447310 NOP10Q9NPE3 64 aaKnown RBP8.37□□□□□ -1.07
ZNF550-204ENST00000447310 SOCS3O14543 225 aa8.36□□□□□ -1.07
ZNF550-204ENST00000447310 C10orf99Q6UWK7 81 aa8.36□□□□□ -1.07
ZNF550-204ENST00000447310 TSPEAR-AS2P59090 65 aa8.36□□□□□ -1.07
ZNF550-204ENST00000447310 TRBV6-5A0A0K0K1A5 114 aa8.36□□□□□ -1.07
ZNF550-204ENST00000447310 KLLNB2CW77 178 aa8.36□□□□□ -1.07
ZNF550-204ENST00000447310 K7EQG2 157 aa8.36□□□□□ -1.07
ZNF550-204ENST00000447310 TRAV4A0A0B4J268 109 aa8.35□□□□□ -1.07
ZNF550-204ENST00000447310 TMEM61Q8N0U2 210 aa8.35□□□□□ -1.07
ZNF550-204ENST00000447310 IGLV4-69A0A075B6H9 119 aa8.35□□□□□ -1.07
ZNF550-204ENST00000447310 FREM2Q5SZK8 3169 aa8.35□□□□□ -1.07
ZNF550-204ENST00000447310 ACYP1P07311 99 aa8.35□□□□□ -1.07
ZNF550-204ENST00000447310 CRYGDP07320 174 aa8.35□□□□□ -1.07
ZNF550-204ENST00000447310 CRIP2P52943 208 aaPredicted RBP8.35□□□□□ -1.07
ZNF550-204ENST00000447310 RPL32P62910 135 aaKnown RBP8.35□□□□□ -1.07
ZNF550-204ENST00000447310 C5orf38Q86SI9 138 aa8.35□□□□□ -1.07
ZNF550-204ENST00000447310 DNAJC30Q96LL9 226 aa8.35□□□□□ -1.07
ZNF550-204ENST00000447310 LAMTOR3Q9UHA4 124 aa8.35□□□□□ -1.07
ZNF550-204ENST00000447310 EYSQ5T1H1 3165 aa8.35□□□□□ -1.07
ZNF550-204ENST00000447310 TSHBP01222 138 aa8.35□□□□□ -1.07
ZNF550-204ENST00000447310 UBE2D3P61077 147 aa8.34□□□□□ -1.07
ZNF550-204ENST00000447310 UBE2D2P62837 147 aa8.34□□□□□ -1.07
ZNF550-204ENST00000447310 C19orf84I3L1E1 186 aa8.34□□□□□ -1.07
ZNF550-204ENST00000447310 EDN2P20800 178 aa8.34□□□□□ -1.07
ZNF550-204ENST00000447310 LINC00467Q9BRT7 94 aa8.34□□□□□ -1.07
ZNF550-204ENST00000447310 SND1-IT1Q9HBX3 110 aa8.34□□□□□ -1.07
ZNF550-204ENST00000447310 TRBV30A0A0K0K1B3 111 aa8.34□□□□□ -1.07
ZNF550-204ENST00000447310 PRM2P04554 102 aa8.34□□□□□ -1.07
ZNF550-204ENST00000447310 SS18Q15532 418 aa8.33□□□□□ -1.08
ZNF550-204ENST00000447310 HERV-K104P63124 156 aa8.33□□□□□ -1.08
ZNF550-204ENST00000447310 CLPSL2Q6UWE3 100 aa8.33□□□□□ -1.08
ZNF550-204ENST00000447310 TMEM263Q8WUH6 116 aaKnown RBP8.33□□□□□ -1.08
ZNF550-204ENST00000447310 Q9HAA7 133 aa8.32□□□□□ -1.08
ZNF550-204ENST00000447310 CMC4P56277 68 aaPredicted RBP8.32□□□□□ -1.08
ZNF550-204ENST00000447310 ODF3Q96PU9 254 aa8.32□□□□□ -1.08
ZNF550-204ENST00000447310 J3QLI3 93 aa8.31□□□□□ -1.08
ZNF550-204ENST00000447310 DCANP1Q8TF63 244 aa8.31□□□□□ -1.08
ZNF550-204ENST00000447310 ZNF580Q9UK33 172 aa8.31□□□□□ -1.08
ZNF550-204ENST00000447310 A0A096LPF7 62 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms