RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 CASC10Q5T4H9 136 aa10.42□□□□□ -0.74
CCNE1-203ENST00000444983 Q8N8P6 123 aa10.42□□□□□ -0.74
CCNE1-203ENST00000444983 URB1-AS1Q96HZ7 61 aa10.42□□□□□ -0.74
CCNE1-203ENST00000444983 TSHBP01222 138 aa10.41□□□□□ -0.74
CCNE1-203ENST00000444983 PMCHP20382 165 aa10.41□□□□□ -0.74
CCNE1-203ENST00000444983 NXT2Q9NPJ8 142 aaKnown RBP10.41□□□□□ -0.74
CCNE1-203ENST00000444983 TRBV6-8A0A0A6YYG3 113 aa10.39□□□□□ -0.75
CCNE1-203ENST00000444983 C1orf196B1AJZ1 125 aa10.39□□□□□ -0.75
CCNE1-203ENST00000444983 K7EMI3 77 aa10.39□□□□□ -0.75
CCNE1-203ENST00000444983 SMIM6P0DI80 62 aa10.39□□□□□ -0.75
CCNE1-203ENST00000444983 TMEM97Q5BJF2 176 aa10.39□□□□□ -0.75
CCNE1-203ENST00000444983 DEFB104AQ8WTQ1 72 aa10.39□□□□□ -0.75
CCNE1-203ENST00000444983 KIR2DL4Q99706 377 aa10.39□□□□□ -0.75
CCNE1-203ENST00000444983 LYSTQ99698 3801 aa10.39□□□□□ -0.75
CCNE1-203ENST00000444983 ESDP10768 282 aa10.38□□□□□ -0.75
CCNE1-203ENST00000444983 LINC00310P59036 64 aa10.38□□□□□ -0.75
CCNE1-203ENST00000444983 COTL1Q14019 142 aa10.38□□□□□ -0.75
CCNE1-203ENST00000444983 NIT1Q86X76 327 aa10.38□□□□□ -0.75
CCNE1-203ENST00000444983 PRSS3P2Q8NHM4 247 aa10.38□□□□□ -0.75
CCNE1-203ENST00000444983 TCAPO15273 167 aa10.38□□□□□ -0.75
CCNE1-203ENST00000444983 LINC00614P0C842 121 aa10.38□□□□□ -0.75
CCNE1-203ENST00000444983 LELP1Q5T871 98 aa10.38□□□□□ -0.75
CCNE1-203ENST00000444983 CHCHD7Q9BUK0 85 aa10.38□□□□□ -0.75
CCNE1-203ENST00000444983 LINC00588Q9Y4M8 146 aa10.38□□□□□ -0.75
CCNE1-203ENST00000444983 PLECQ15149 4684 aaKnown RBP10.37□□□□□ -0.75
CCNE1-203ENST00000444983 FCER1GP30273 86 aa10.35□□□□□ -0.75
CCNE1-203ENST00000444983 AKR1D1P51857 326 aa10.35□□□□□ -0.75
CCNE1-203ENST00000444983 CCL18P55774 89 aa10.35□□□□□ -0.75
CCNE1-203ENST00000444983 LAGE3Q14657 143 aa10.35□□□□□ -0.75
CCNE1-203ENST00000444983 COA6Q5JTJ3 125 aaKnown RBP10.35□□□□□ -0.75
CCNE1-203ENST00000444983 AP5S1Q9NUS5 200 aa10.35□□□□□ -0.75
CCNE1-203ENST00000444983 TRBV25-1A0A075B6N4 114 aa10.34□□□□□ -0.75
CCNE1-203ENST00000444983 IGHV1-24A0A0C4DH33 117 aa10.34□□□□□ -0.75
CCNE1-203ENST00000444983 LINC00587B1AMM8 73 aa10.34□□□□□ -0.75
CCNE1-203ENST00000444983 AMTP48728 403 aa10.34□□□□□ -0.75
CCNE1-203ENST00000444983 RAB5BP61020 215 aa10.34□□□□□ -0.75
CCNE1-203ENST00000444983 ORMDL2Q53FV1 153 aa10.34□□□□□ -0.75
CCNE1-203ENST00000444983 BAGE3Q86Y29 109 aa10.34□□□□□ -0.75
CCNE1-203ENST00000444983 CHCHD1Q96BP2 118 aaKnown RBP10.34□□□□□ -0.75
CCNE1-203ENST00000444983 UPK3BQ9BT76 320 aa10.34□□□□□ -0.75
CCNE1-203ENST00000444983 MRPS16Q9Y3D3 137 aaKnown RBP10.34□□□□□ -0.75
CCNE1-203ENST00000444983 NUPR1O60356 82 aa10.34□□□□□ -0.75
CCNE1-203ENST00000444983 BTF3P20290 206 aaKnown RBP10.34□□□□□ -0.75
CCNE1-203ENST00000444983 FA2HQ7L5A8 372 aa10.34□□□□□ -0.75
CCNE1-203ENST00000444983 C20orf203Q8NBC4 194 aa10.34□□□□□ -0.75
CCNE1-203ENST00000444983 A0A096LNJ9 63 aa10.33□□□□□ -0.76
CCNE1-203ENST00000444983 SERF1AO75920 110 aa10.33□□□□□ -0.76
CCNE1-203ENST00000444983 RNASEKQ6P5S7 137 aaKnown RBP10.32□□□□□ -0.76
CCNE1-203ENST00000444983 TMEM243Q9BU79 118 aa10.32□□□□□ -0.76
CCNE1-203ENST00000444983 H7C423 109 aa10.31□□□□□ -0.76
CCNE1-203ENST00000444983 WFDC10BQ8IUB3 73 aa10.31□□□□□ -0.76
CCNE1-203ENST00000444983 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.31□□□□□ -0.76
CCNE1-203ENST00000444983 TRAV8-6A0A0B4J262 113 aa10.31□□□□□ -0.76
CCNE1-203ENST00000444983 IGKV2-29A2NJV5 120 aaPredicted RBP10.31□□□□□ -0.76
CCNE1-203ENST00000444983 RPL39P62891 51 aaKnown RBP10.3□□□□□ -0.76
CCNE1-203ENST00000444983 LGALS9CQ6DKI2 356 aa10.3□□□□□ -0.76
CCNE1-203ENST00000444983 CHCHD5Q9BSY4 110 aa10.3□□□□□ -0.76
CCNE1-203ENST00000444983 A0A1B0GUV1 79 aa10.29□□□□□ -0.76
CCNE1-203ENST00000444983 NDUFA6P56556 154 aa10.29□□□□□ -0.76
CCNE1-203ENST00000444983 C2orf66Q6UXQ4 117 aa10.29□□□□□ -0.76
CCNE1-203ENST00000444983 MRPL52Q86TS9 123 aaKnown RBP10.29□□□□□ -0.76
CCNE1-203ENST00000444983 TOMM6Q96B49 74 aa10.29□□□□□ -0.76
CCNE1-203ENST00000444983 HSBP1O75506 76 aa10.28□□□□□ -0.76
CCNE1-203ENST00000444983 DNAH10OSP0CZ25 163 aa10.28□□□□□ -0.76
CCNE1-203ENST00000444983 G0S2P27469 103 aa10.28□□□□□ -0.76
CCNE1-203ENST00000444983 PMCHL1Q16048 86 aa10.28□□□□□ -0.76
CCNE1-203ENST00000444983 FAM104AQ969W3 186 aa10.28□□□□□ -0.76
CCNE1-203ENST00000444983 UBE2D4Q9Y2X8 147 aa10.28□□□□□ -0.76
CCNE1-203ENST00000444983 CSDC2Q9Y534 153 aaKnown RBP10.28□□□□□ -0.76
CCNE1-203ENST00000444983 FGF6P10767 208 aa10.28□□□□□ -0.76
CCNE1-203ENST00000444983 GAGE6Q13070 117 aa10.28□□□□□ -0.76
CCNE1-203ENST00000444983 MPV17L2Q567V2 206 aa10.28□□□□□ -0.76
CCNE1-203ENST00000444983 Q8N3U1 123 aa10.28□□□□□ -0.76
CCNE1-203ENST00000444983 TIMM21Q9BVV7 248 aa10.28□□□□□ -0.76
CCNE1-203ENST00000444983 Q9H8V8 135 aa10.28□□□□□ -0.76
CCNE1-203ENST00000444983 CYSLTR1Q9Y271 337 aa10.28□□□□□ -0.76
CCNE1-203ENST00000444983 PYGO1Q9Y3Y4 419 aa10.28□□□□□ -0.76
CCNE1-203ENST00000444983 IGIPA6NJ69 53 aa10.27□□□□□ -0.77
CCNE1-203ENST00000444983 SIVA1O15304 175 aa10.27□□□□□ -0.77
CCNE1-203ENST00000444983 HBDP02042 147 aa10.27□□□□□ -0.77
CCNE1-203ENST00000444983 LINC01556Q5JQF7 62 aa10.27□□□□□ -0.77
CCNE1-203ENST00000444983 FAM19A2Q8N3H0 131 aa10.27□□□□□ -0.77
CCNE1-203ENST00000444983 TMEM18Q96B42 140 aa10.27□□□□□ -0.77
CCNE1-203ENST00000444983 UBE2L6O14933 153 aa10.26□□□□□ -0.77
CCNE1-203ENST00000444983 ZNF25P17030 456 aaPredicted RBP10.26□□□□□ -0.77
CCNE1-203ENST00000444983 RBX1P62877 108 aa10.26□□□□□ -0.77
CCNE1-203ENST00000444983 PDZD11Q5EBL8 140 aa10.26□□□□□ -0.77
CCNE1-203ENST00000444983 UBE2DNLQ8IWF7 75 aa10.26□□□□□ -0.77
CCNE1-203ENST00000444983 Q8N976 141 aa10.26□□□□□ -0.77
CCNE1-203ENST00000444983 DNAH1Q9P2D7 4330 aa10.26□□□□□ -0.77
CCNE1-203ENST00000444983 LINC01549A6NIU2 74 aa10.25□□□□□ -0.77
CCNE1-203ENST00000444983 PKIAP61925 76 aa10.25□□□□□ -0.77
CCNE1-203ENST00000444983 LINC00476Q8WZB0 136 aa10.25□□□□□ -0.77
CCNE1-203ENST00000444983 IGLV4-60A0A075B6I1 120 aa10.25□□□□□ -0.77
CCNE1-203ENST00000444983 TMEM262E9PQX1 116 aa10.25□□□□□ -0.77
CCNE1-203ENST00000444983 SPANXA1Q9NS26 97 aa10.25□□□□□ -0.77
CCNE1-203ENST00000444983 A0A087WX48 190 aa10.24□□□□□ -0.77
CCNE1-203ENST00000444983 C5orf52A6NGY3 159 aa10.24□□□□□ -0.77
CCNE1-203ENST00000444983 NPSP0C0P6 89 aa10.24□□□□□ -0.77
CCNE1-203ENST00000444983 ERASQ7Z444 233 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms