RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 H7C423 109 aa11.27□□□□□ -0.61
AP1S3-206ENST00000443700 IGHV4-59P01825 116 aa11.27□□□□□ -0.61
AP1S3-206ENST00000443700 NDUFV3P56181 108 aaKnown RBP11.27□□□□□ -0.61
AP1S3-206ENST00000443700 ADAMTSL4-AS1Q5T5F5 129 aa11.27□□□□□ -0.61
AP1S3-206ENST00000443700 DUX5Q96PT3 197 aa11.27□□□□□ -0.61
AP1S3-206ENST00000443700 NDUFA1O15239 70 aa11.26□□□□□ -0.61
AP1S3-206ENST00000443700 GNLYP22749 145 aa11.26□□□□□ -0.61
AP1S3-206ENST00000443700 HOXD3P31249 432 aaPredicted RBP11.26□□□□□ -0.61
AP1S3-206ENST00000443700 CEMP1Q6PRD7 247 aaPredicted RBP11.26□□□□□ -0.61
AP1S3-206ENST00000443700 COPS9Q8WXC6 57 aa11.26□□□□□ -0.61
AP1S3-206ENST00000443700 MUC6Q6W4X9 2439 aa11.26□□□□□ -0.61
AP1S3-206ENST00000443700 TRAV4A0A0B4J268 109 aa11.26□□□□□ -0.61
AP1S3-206ENST00000443700 TIRAPP58753 221 aa11.26□□□□□ -0.61
AP1S3-206ENST00000443700 DSCR9P59020 149 aa11.26□□□□□ -0.61
AP1S3-206ENST00000443700 CIRBPQ14011 172 aaKnown RBP11.26□□□□□ -0.61
AP1S3-206ENST00000443700 DEFB112Q30KQ8 113 aa11.26□□□□□ -0.61
AP1S3-206ENST00000443700 C10orf99Q6UWK7 81 aa11.26□□□□□ -0.61
AP1S3-206ENST00000443700 C15orf53Q8NAA6 179 aa11.26□□□□□ -0.61
AP1S3-206ENST00000443700 UBE2E2Q96LR5 201 aa11.26□□□□□ -0.61
AP1S3-206ENST00000443700 PRRC2AP48634 2157 aaKnown RBP11.25□□□□□ -0.61
AP1S3-206ENST00000443700 AVPP01185 164 aa11.25□□□□□ -0.61
AP1S3-206ENST00000443700 RNASE13Q5GAN3 156 aaKnown RBP11.25□□□□□ -0.61
AP1S3-206ENST00000443700 DEFB121Q5J5C9 76 aa11.25□□□□□ -0.61
AP1S3-206ENST00000443700 LINC00467Q9BRT7 94 aa11.25□□□□□ -0.61
AP1S3-206ENST00000443700 IGLV5-45A0A087WSX0 123 aa11.24□□□□□ -0.61
AP1S3-206ENST00000443700 KNCNA6PVL3 124 aa11.24□□□□□ -0.61
AP1S3-206ENST00000443700 HTN1P15515 57 aa11.24□□□□□ -0.61
AP1S3-206ENST00000443700 PROK1P58294 105 aa11.24□□□□□ -0.61
AP1S3-206ENST00000443700 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.23□□□□□ -0.61
AP1S3-206ENST00000443700 IGKV2-29A2NJV5 120 aaPredicted RBP11.23□□□□□ -0.61
AP1S3-206ENST00000443700 CRLF1O75462 422 aa11.23□□□□□ -0.61
AP1S3-206ENST00000443700 IGHV3-53P01767 116 aa11.23□□□□□ -0.61
AP1S3-206ENST00000443700 DEFB131AP59861 70 aa11.23□□□□□ -0.61
AP1S3-206ENST00000443700 CEP295Q9C0D2 2601 aa11.23□□□□□ -0.61
AP1S3-206ENST00000443700 J3QLI3 93 aa11.23□□□□□ -0.61
AP1S3-206ENST00000443700 NHLRC4P0CG21 123 aaPredicted RBP11.23□□□□□ -0.61
AP1S3-206ENST00000443700 HIVEP3Q5T1R4 2406 aa11.22□□□□□ -0.61
AP1S3-206ENST00000443700 NPC2P61916 151 aa11.22□□□□□ -0.61
AP1S3-206ENST00000443700 CLEC2BQ92478 149 aa11.22□□□□□ -0.61
AP1S3-206ENST00000443700 HERVK_113P63121 156 aa11.21□□□□□ -0.61
AP1S3-206ENST00000443700 LINC01356Q8N9X3 169 aa11.21□□□□□ -0.61
AP1S3-206ENST00000443700 PRORYQ9H606 182 aa11.21□□□□□ -0.61
AP1S3-206ENST00000443700 VPREB3Q9UKI3 123 aa11.21□□□□□ -0.61
AP1S3-206ENST00000443700 GAGE12JA6NER3 117 aa11.21□□□□□ -0.62
AP1S3-206ENST00000443700 GAGE7O76087 117 aa11.21□□□□□ -0.62
AP1S3-206ENST00000443700 GAGE12FP0CL80 117 aa11.21□□□□□ -0.62
AP1S3-206ENST00000443700 GAGE12GP0CL81 117 aa11.21□□□□□ -0.62
AP1S3-206ENST00000443700 GAGE12IP0CL82 117 aa11.21□□□□□ -0.62
AP1S3-206ENST00000443700 GAGE4Q13068 117 aa11.21□□□□□ -0.62
AP1S3-206ENST00000443700 DGAT2L7PQ6IED9 249 aa11.21□□□□□ -0.62
AP1S3-206ENST00000443700 COL6A6A6NMZ7 2263 aa11.2□□□□□ -0.62
AP1S3-206ENST00000443700 NACAE9PAV3 2078 aa11.2□□□□□ -0.62
AP1S3-206ENST00000443700 A8MZ25 164 aa11.2□□□□□ -0.62
AP1S3-206ENST00000443700 RS1O15537 224 aa11.2□□□□□ -0.62
AP1S3-206ENST00000443700 BEAN1Q3B7T3 259 aa11.2□□□□□ -0.62
AP1S3-206ENST00000443700 TMEM101Q96IK0 257 aa11.2□□□□□ -0.62
AP1S3-206ENST00000443700 CDKN2A-AS1Q9UH64 79 aa11.2□□□□□ -0.62
AP1S3-206ENST00000443700 RBMY1BA6NDE4 496 aaKnown RBP11.19□□□□□ -0.62
AP1S3-206ENST00000443700 RBMY1EA6NEQ0 496 aaKnown RBP11.19□□□□□ -0.62
AP1S3-206ENST00000443700 INSP01308 110 aa11.19□□□□□ -0.62
AP1S3-206ENST00000443700 ACYP1P07311 99 aa11.19□□□□□ -0.62
AP1S3-206ENST00000443700 RBMY1DP0C7P1 496 aaKnown RBP11.19□□□□□ -0.62
AP1S3-206ENST00000443700 Q6ZSN1 163 aa11.19□□□□□ -0.62
AP1S3-206ENST00000443700 PEMTQ9UBM1 199 aa11.19□□□□□ -0.62
AP1S3-206ENST00000443700 FAM19A3Q7Z5A8 133 aa11.18□□□□□ -0.62
AP1S3-206ENST00000443700 SS18L2Q9UHA2 77 aa11.18□□□□□ -0.62
AP1S3-206ENST00000443700 IGLV5-39A0A0G2JS06 123 aa11.18□□□□□ -0.62
AP1S3-206ENST00000443700 B5MCH6 92 aa11.18□□□□□ -0.62
AP1S3-206ENST00000443700 Q6ZSV7 163 aa11.18□□□□□ -0.62
AP1S3-206ENST00000443700 C11orf72Q8NBR9 251 aa11.18□□□□□ -0.62
AP1S3-206ENST00000443700 LINC00308Q8TCZ7 52 aa11.18□□□□□ -0.62
AP1S3-206ENST00000443700 LINC01587Q99440 93 aa11.18□□□□□ -0.62
AP1S3-206ENST00000443700 ZNF702PQ9H963 129 aa11.18□□□□□ -0.62
AP1S3-206ENST00000443700 RELNP78509 3460 aa11.17□□□□□ -0.62
AP1S3-206ENST00000443700 COX7A2LO14548 114 aa11.17□□□□□ -0.62
AP1S3-206ENST00000443700 NBASA2RRP1 2371 aa11.17□□□□□ -0.62
AP1S3-206ENST00000443700 DOPEY2Q9Y3R5 2298 aa11.17□□□□□ -0.62
AP1S3-206ENST00000443700 IGHV3-38A0A0C4DH36 116 aa11.16□□□□□ -0.62
AP1S3-206ENST00000443700 PPDPFQ9H3Y8 114 aa11.16□□□□□ -0.62
AP1S3-206ENST00000443700 TRBV7-7A0A0K0K1E9 115 aa11.16□□□□□ -0.62
AP1S3-206ENST00000443700 SLURP1P55000 103 aa11.16□□□□□ -0.62
AP1S3-206ENST00000443700 Q9H8V8 135 aa11.16□□□□□ -0.62
AP1S3-206ENST00000443700 MAP6D1Q9H9H5 199 aa11.16□□□□□ -0.62
AP1S3-206ENST00000443700 DAND5Q8N907 189 aa11.15□□□□□ -0.62
AP1S3-206ENST00000443700 CITED2Q99967 270 aaPredicted RBP11.15□□□□□ -0.62
AP1S3-206ENST00000443700 HERV-K104P63124 156 aa11.14□□□□□ -0.63
AP1S3-206ENST00000443700 DYNLRB2Q8TF09 96 aa11.14□□□□□ -0.63
AP1S3-206ENST00000443700 Q9UF83 564 aa11.14□□□□□ -0.63
AP1S3-206ENST00000443700 IGHV3OR16-12A0A075B7B8 117 aa11.13□□□□□ -0.63
AP1S3-206ENST00000443700 Q6YL49 198 aa11.13□□□□□ -0.63
AP1S3-206ENST00000443700 CSDC2Q9Y534 153 aaKnown RBP11.13□□□□□ -0.63
AP1S3-206ENST00000443700 ATRXP46100 2492 aa11.13□□□□□ -0.63
AP1S3-206ENST00000443700 CCDC179H3BU77 68 aa11.13□□□□□ -0.63
AP1S3-206ENST00000443700 TRACP01848 142 aa11.13□□□□□ -0.63
AP1S3-206ENST00000443700 LINC00242Q5T6M2 205 aa11.13□□□□□ -0.63
AP1S3-206ENST00000443700 IMUPQ9GZP8 106 aa11.13□□□□□ -0.63
AP1S3-206ENST00000443700 IGF2RP11717 2491 aa11.12□□□□□ -0.63
AP1S3-206ENST00000443700 SHISA2Q6UWI4 295 aa11.12□□□□□ -0.63
AP1S3-206ENST00000443700 SVEP1Q4LDE5 3571 aa11.11□□□□□ -0.63
AP1S3-206ENST00000443700 TRBV10-1A0A0K0K1A3 114 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms