RNA–Protein interactions for RNA: ENST00000441778.6

LDB2-202, Transcript of LIM domain binding 2, humanhuman

TSL 1 (best) BASIC

Gene LDB2, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2-202ENST00000441778 PYGO1Q9Y3Y4 419 aa6.57□□□□□ -1.36
LDB2-202ENST00000441778 H3BT86 120 aa6.56□□□□□ -1.36
LDB2-202ENST00000441778 RBMY1A1P0DJD3 496 aaKnown RBP6.56□□□□□ -1.36
LDB2-202ENST00000441778 RBMY1CP0DJD4 496 aa6.56□□□□□ -1.36
LDB2-202ENST00000441778 RBMY1FQ15415 496 aaKnown RBP6.56□□□□□ -1.36
LDB2-202ENST00000441778 VSIG2Q96IQ7 327 aa6.56□□□□□ -1.36
LDB2-202ENST00000441778 Q9UF83 564 aa6.56□□□□□ -1.36
LDB2-202ENST00000441778 LST1O00453 97 aa6.56□□□□□ -1.36
LDB2-202ENST00000441778 KLRB1Q12918 225 aa6.56□□□□□ -1.36
LDB2-202ENST00000441778 TMEM61Q8N0U2 210 aa6.56□□□□□ -1.36
LDB2-202ENST00000441778 DUX3Q96PT4 197 aa6.56□□□□□ -1.36
LDB2-202ENST00000441778 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.55□□□□□ -1.36
LDB2-202ENST00000441778 IGHV4-61A0A0C4DH41 118 aa6.55□□□□□ -1.36
LDB2-202ENST00000441778 K7EQG2 157 aa6.55□□□□□ -1.36
LDB2-202ENST00000441778 C10orf99Q6UWK7 81 aa6.55□□□□□ -1.36
LDB2-202ENST00000441778 CRYBG3Q68DQ2 2970 aa6.55□□□□□ -1.36
LDB2-202ENST00000441778 SNRPD3P62318 126 aaKnown RBP6.55□□□□□ -1.36
LDB2-202ENST00000441778 DAND5Q8N907 189 aa6.55□□□□□ -1.36
LDB2-202ENST00000441778 TINCRA0A1B0GVN0 87 aa6.54□□□□□ -1.36
LDB2-202ENST00000441778 COX6CP09669 75 aa6.54□□□□□ -1.36
LDB2-202ENST00000441778 DEFB121Q5J5C9 76 aa6.54□□□□□ -1.36
LDB2-202ENST00000441778 CHCHD7Q9BUK0 85 aa6.54□□□□□ -1.36
LDB2-202ENST00000441778 EDA2RQ9HAV5 297 aa6.54□□□□□ -1.36
LDB2-202ENST00000441778 TRGV11A0A075B6L2 103 aa6.54□□□□□ -1.36
LDB2-202ENST00000441778 PRM2P04554 102 aa6.54□□□□□ -1.36
LDB2-202ENST00000441778 UBE2D4Q9Y2X8 147 aa6.54□□□□□ -1.36
LDB2-202ENST00000441778 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.53□□□□□ -1.36
LDB2-202ENST00000441778 FAM240AA0A1B0GVK7 77 aa6.53□□□□□ -1.36
LDB2-202ENST00000441778 IGKV2-29A2NJV5 120 aaPredicted RBP6.53□□□□□ -1.36
LDB2-202ENST00000441778 KNCNA6PVL3 124 aa6.53□□□□□ -1.36
LDB2-202ENST00000441778 HTN1P15515 57 aa6.53□□□□□ -1.36
LDB2-202ENST00000441778 PSMB8P28062 276 aa6.53□□□□□ -1.36
LDB2-202ENST00000441778 MRPL23Q16540 153 aaKnown RBP6.53□□□□□ -1.36
LDB2-202ENST00000441778 Q6ZSN1 163 aa6.53□□□□□ -1.36
LDB2-202ENST00000441778 C19orf84I3L1E1 186 aa6.53□□□□□ -1.36
LDB2-202ENST00000441778 CITED2Q99967 270 aaPredicted RBP6.53□□□□□ -1.36
LDB2-202ENST00000441778 TNFRSF18Q9Y5U5 241 aa6.53□□□□□ -1.36
LDB2-202ENST00000441778 MAP1AP78559 2803 aaPredicted RBP6.53□□□□□ -1.36
LDB2-202ENST00000441778 NBL1P41271 181 aa6.52□□□□□ -1.37
LDB2-202ENST00000441778 LINC00467Q9BRT7 94 aa6.52□□□□□ -1.37
LDB2-202ENST00000441778 YAE1D1Q9NRH1 226 aa6.52□□□□□ -1.37
LDB2-202ENST00000441778 CSPG4Q6UVK1 2322 aa6.52□□□□□ -1.37
LDB2-202ENST00000441778 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.52□□□□□ -1.37
LDB2-202ENST00000441778 CHCHD5Q9BSY4 110 aa6.52□□□□□ -1.37
LDB2-202ENST00000441778 SPANXA1Q9NS26 97 aa6.52□□□□□ -1.37
LDB2-202ENST00000441778 CDKN2A-AS1Q9UH64 79 aa6.52□□□□□ -1.37
LDB2-202ENST00000441778 TRBV7-7A0A0K0K1E9 115 aa6.51□□□□□ -1.37
LDB2-202ENST00000441778 TIMM17BO60830 172 aa6.51□□□□□ -1.37
LDB2-202ENST00000441778 SYNJ2BPP57105 145 aa6.51□□□□□ -1.37
LDB2-202ENST00000441778 SMIM20Q8N5G0 67 aa6.51□□□□□ -1.37
LDB2-202ENST00000441778 RNF152Q8N8N0 203 aa6.51□□□□□ -1.37
LDB2-202ENST00000441778 DUX5Q96PT3 197 aa6.51□□□□□ -1.37
LDB2-202ENST00000441778 IGHV3-38A0A0C4DH36 116 aa6.51□□□□□ -1.37
LDB2-202ENST00000441778 NDUFA1O15239 70 aa6.51□□□□□ -1.37
LDB2-202ENST00000441778 MEIG1Q5JSS6 88 aa6.51□□□□□ -1.37
LDB2-202ENST00000441778 TMEM101Q96IK0 257 aa6.51□□□□□ -1.37
LDB2-202ENST00000441778 FAM110AQ9BQ89 295 aa6.5□□□□□ -1.37
LDB2-202ENST00000441778 PIMREGQ9BSJ6 248 aa6.5□□□□□ -1.37
LDB2-202ENST00000441778 AVPP01185 164 aa6.5□□□□□ -1.37
LDB2-202ENST00000441778 CELSR2Q9HCU4 2923 aa6.49□□□□□ -1.37
LDB2-202ENST00000441778 SPTBN4Q9H254 2564 aa6.49□□□□□ -1.37
LDB2-202ENST00000441778 IGLV5-45A0A087WSX0 123 aa6.49□□□□□ -1.37
LDB2-202ENST00000441778 RBMY1BA6NDE4 496 aaKnown RBP6.49□□□□□ -1.37
LDB2-202ENST00000441778 RBMY1EA6NEQ0 496 aaKnown RBP6.49□□□□□ -1.37
LDB2-202ENST00000441778 RBMY1DP0C7P1 496 aaKnown RBP6.49□□□□□ -1.37
LDB2-202ENST00000441778 COX6A2Q02221 97 aa6.49□□□□□ -1.37
LDB2-202ENST00000441778 LINC00308Q8TCZ7 52 aa6.49□□□□□ -1.37
LDB2-202ENST00000441778 SMCR5Q8TEV8 140 aa6.49□□□□□ -1.37
LDB2-202ENST00000441778 HERV-K104P63124 156 aa6.49□□□□□ -1.37
LDB2-202ENST00000441778 C3orf56Q8N813 242 aa6.49□□□□□ -1.37
LDB2-202ENST00000441778 C10orf105Q8TEF2 133 aa6.49□□□□□ -1.37
LDB2-202ENST00000441778 A0A0U1RRA0 63 aa6.48□□□□□ -1.37
LDB2-202ENST00000441778 SOSTDC1Q6X4U4 206 aa6.48□□□□□ -1.37
LDB2-202ENST00000441778 Q8N2B8 174 aa6.48□□□□□ -1.37
LDB2-202ENST00000441778 ZNF625Q96I27 306 aaPredicted RBP6.48□□□□□ -1.37
LDB2-202ENST00000441778 LINC01587Q99440 93 aa6.48□□□□□ -1.37
LDB2-202ENST00000441778 CREBBPQ92793 2442 aa6.48□□□□□ -1.37
LDB2-202ENST00000441778 IGHV4-30-2A0A087WSY4 118 aa6.48□□□□□ -1.37
LDB2-202ENST00000441778 COX7A2LO14548 114 aa6.48□□□□□ -1.37
LDB2-202ENST00000441778 IGHV4-59P01825 116 aa6.48□□□□□ -1.37
LDB2-202ENST00000441778 SHISA2Q6UWI4 295 aa6.48□□□□□ -1.37
LDB2-202ENST00000441778 Q9H8V8 135 aa6.48□□□□□ -1.37
LDB2-202ENST00000441778 SPG11Q96JI7 2443 aa6.47□□□□□ -1.37
LDB2-202ENST00000441778 IGHV3OR16-12A0A075B7B8 117 aa6.47□□□□□ -1.37
LDB2-202ENST00000441778 FAM236AA0A1B0GUQ0 79 aa6.47□□□□□ -1.37
LDB2-202ENST00000441778 FAM236BA0A1B0GV22 79 aa6.47□□□□□ -1.37
LDB2-202ENST00000441778 MSMBP08118 114 aa6.47□□□□□ -1.37
LDB2-202ENST00000441778 TIRAPP58753 221 aa6.47□□□□□ -1.37
LDB2-202ENST00000441778 IGLV5-39A0A0G2JS06 123 aa6.47□□□□□ -1.37
LDB2-202ENST00000441778 HOXD3P31249 432 aaPredicted RBP6.47□□□□□ -1.37
LDB2-202ENST00000441778 DEFB131AP59861 70 aa6.47□□□□□ -1.37
LDB2-202ENST00000441778 BEAN1Q3B7T3 259 aa6.47□□□□□ -1.37
LDB2-202ENST00000441778 IGHV3-53P01767 116 aa6.46□□□□□ -1.38
LDB2-202ENST00000441778 ZNF415Q09FC8 603 aa6.46□□□□□ -1.38
LDB2-202ENST00000441778 C22orf24Q9Y442 160 aa6.46□□□□□ -1.38
LDB2-202ENST00000441778 A8MTW9 85 aa6.45□□□□□ -1.38
LDB2-202ENST00000441778 CIRBPQ14011 172 aaKnown RBP6.45□□□□□ -1.38
LDB2-202ENST00000441778 LINC00242Q5T6M2 205 aa6.45□□□□□ -1.38
LDB2-202ENST00000441778 C11orf72Q8NBR9 251 aa6.45□□□□□ -1.38
LDB2-202ENST00000441778 TMEM89A2RUT3 159 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms