RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 IGHV3-38A0A0C4DH36 116 aa7.55□□□□□ -1.2
SYNE2-206ENST00000441438 Q1T7F1 81 aa7.55□□□□□ -1.2
SYNE2-206ENST00000441438 CNEP1R1Q8N9A8 125 aa7.55□□□□□ -1.2
SYNE2-206ENST00000441438 URB1-AS1Q96HZ7 61 aa7.55□□□□□ -1.2
SYNE2-206ENST00000441438 SLC25A20O43772 301 aa7.55□□□□□ -1.2
SYNE2-206ENST00000441438 DEFA4P12838 97 aa7.55□□□□□ -1.2
SYNE2-206ENST00000441438 Q6P435 159 aa7.55□□□□□ -1.2
SYNE2-206ENST00000441438 PDPNQ86YL7 162 aa7.55□□□□□ -1.2
SYNE2-206ENST00000441438 TCRBV4S1A1TA0A5B7 111 aa7.54□□□□□ -1.2
SYNE2-206ENST00000441438 ZNF71Q9NQZ8 489 aaPredicted RBP7.54□□□□□ -1.2
SYNE2-206ENST00000441438 C17orf58Q2M2W7 97 aa7.54□□□□□ -1.2
SYNE2-206ENST00000441438 DEFB121Q5J5C9 76 aa7.54□□□□□ -1.2
SYNE2-206ENST00000441438 NACAE9PAV3 2078 aa7.54□□□□□ -1.2
SYNE2-206ENST00000441438 IGHV3-43A0A0B4J1X8 118 aa7.53□□□□□ -1.2
SYNE2-206ENST00000441438 DEFB108AA8MXU0 73 aa7.53□□□□□ -1.2
SYNE2-206ENST00000441438 C2orf83Q53S99 150 aa7.53□□□□□ -1.2
SYNE2-206ENST00000441438 IL4P05112 153 aa7.53□□□□□ -1.2
SYNE2-206ENST00000441438 FAM216BQ8N7L0 139 aa7.53□□□□□ -1.2
SYNE2-206ENST00000441438 NANOS2P60321 138 aaKnown RBP7.53□□□□□ -1.2
SYNE2-206ENST00000441438 SDIM1Q6ZPB5 146 aa7.53□□□□□ -1.2
SYNE2-206ENST00000441438 MRPL35Q9NZE8 188 aaKnown RBP7.53□□□□□ -1.2
SYNE2-206ENST00000441438 NPYP01303 97 aa7.52□□□□□ -1.21
SYNE2-206ENST00000441438 ZNF580Q9UK33 172 aa7.52□□□□□ -1.21
SYNE2-206ENST00000441438 H3BVH4 76 aa7.52□□□□□ -1.21
SYNE2-206ENST00000441438 XCL1P47992 114 aa7.52□□□□□ -1.21
SYNE2-206ENST00000441438 EDDM3BP56851 147 aa7.52□□□□□ -1.21
SYNE2-206ENST00000441438 Q8IYB0 196 aa7.52□□□□□ -1.21
SYNE2-206ENST00000441438 BPESC1Q9GZL8 116 aa7.52□□□□□ -1.21
SYNE2-206ENST00000441438 DCHS2Q6V1P9 2916 aa7.51□□□□□ -1.21
SYNE2-206ENST00000441438 PEX7O00628 323 aa7.51□□□□□ -1.21
SYNE2-206ENST00000441438 TMEM167BQ9NRX6 74 aa7.51□□□□□ -1.21
SYNE2-206ENST00000441438 WNK2Q9Y3S1 2297 aa7.51□□□□□ -1.21
SYNE2-206ENST00000441438 IGLV5-45A0A087WSX0 123 aa7.5□□□□□ -1.21
SYNE2-206ENST00000441438 MYMXA0A1B0GTQ4 84 aa7.5□□□□□ -1.21
SYNE2-206ENST00000441438 H3BMM0 161 aa7.5□□□□□ -1.21
SYNE2-206ENST00000441438 PSMG4Q5JS54 123 aa7.5□□□□□ -1.21
SYNE2-206ENST00000441438 UBE2WQ96B02 151 aa7.5□□□□□ -1.21
SYNE2-206ENST00000441438 TRAV13-2A0A0B4J235 113 aa7.49□□□□□ -1.21
SYNE2-206ENST00000441438 ESRGQ1W209 222 aa7.49□□□□□ -1.21
SYNE2-206ENST00000441438 C17orf98A8MV24 154 aa7.49□□□□□ -1.21
SYNE2-206ENST00000441438 IGHV4-38-2P0DP08 117 aa7.49□□□□□ -1.21
SYNE2-206ENST00000441438 FAM229BQ4G0N7 80 aa7.49□□□□□ -1.21
SYNE2-206ENST00000441438 TRBV7-1A0A0A6YYK4 115 aa7.48□□□□□ -1.21
SYNE2-206ENST00000441438 KRTAP16-1A8MUX0 517 aa7.48□□□□□ -1.21
SYNE2-206ENST00000441438 CHTF8P0CG12 524 aa7.48□□□□□ -1.21
SYNE2-206ENST00000441438 CHCHD1Q96BP2 118 aaKnown RBP7.48□□□□□ -1.21
SYNE2-206ENST00000441438 BSNQ9UPA5 3926 aa7.48□□□□□ -1.21
SYNE2-206ENST00000441438 IQCF6A8MYZ5 107 aa7.48□□□□□ -1.21
SYNE2-206ENST00000441438 LINC00269Q8N2A0 174 aa7.48□□□□□ -1.21
SYNE2-206ENST00000441438 C8orf49Q96NF6 230 aa7.48□□□□□ -1.21
SYNE2-206ENST00000441438 NAV3Q8IVL0 2385 aa7.48□□□□□ -1.21
SYNE2-206ENST00000441438 FASNP49327 2511 aaKnown RBP7.48□□□□□ -1.21
SYNE2-206ENST00000441438 IGKV3D-15A0A087WSY6 115 aa7.48□□□□□ -1.21
SYNE2-206ENST00000441438 NDUFC1O43677 76 aa7.48□□□□□ -1.21
SYNE2-206ENST00000441438 IGHV4-39P01824 125 aa7.48□□□□□ -1.21
SYNE2-206ENST00000441438 FDCSPQ8NFU4 85 aa7.48□□□□□ -1.21
SYNE2-206ENST00000441438 IGKV3D-20A0A0C4DH25 116 aa7.47□□□□□ -1.21
SYNE2-206ENST00000441438 C3orf84H3BNL1 204 aa7.47□□□□□ -1.21
SYNE2-206ENST00000441438 ZNF462Q96JM2 2506 aa7.47□□□□□ -1.21
SYNE2-206ENST00000441438 SYCNQ0VAF6 134 aa7.47□□□□□ -1.21
SYNE2-206ENST00000441438 MIR17HGQ75NE6 70 aa7.47□□□□□ -1.21
SYNE2-206ENST00000441438 TMEM30CPA0ZSE6 113 aa7.46□□□□□ -1.21
SYNE2-206ENST00000441438 KLKP1Q107X0 134 aa7.46□□□□□ -1.21
SYNE2-206ENST00000441438 Q6ZR03 302 aa7.46□□□□□ -1.21
SYNE2-206ENST00000441438 LEAP2Q969E1 77 aa7.46□□□□□ -1.21
SYNE2-206ENST00000441438 FAM104AQ969W3 186 aa7.46□□□□□ -1.22
SYNE2-206ENST00000441438 GCN1Q92616 2671 aaKnown RBP7.45□□□□□ -1.22
SYNE2-206ENST00000441438 LY6G6DO95868 133 aa7.45□□□□□ -1.22
SYNE2-206ENST00000441438 KLF14Q8TD94 323 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-206ENST00000441438 TEX49A0A1B0GTD5 131 aa7.45□□□□□ -1.22
SYNE2-206ENST00000441438 PRB4P10163 310 aaPredicted RBP7.45□□□□□ -1.22
SYNE2-206ENST00000441438 FXYD3Q14802 87 aa7.45□□□□□ -1.22
SYNE2-206ENST00000441438 GDF5OSQ5U4N7 250 aa7.45□□□□□ -1.22
SYNE2-206ENST00000441438 RPRMLQ8N4K4 120 aa7.45□□□□□ -1.22
SYNE2-206ENST00000441438 CFAP46Q8IYW2 2715 aa7.44□□□□□ -1.22
SYNE2-206ENST00000441438 SPINK4O60575 86 aa7.44□□□□□ -1.22
SYNE2-206ENST00000441438 LEPROTL1O95214 131 aa7.44□□□□□ -1.22
SYNE2-206ENST00000441438 DEFB108BQ8NET1 73 aa7.44□□□□□ -1.22
SYNE2-206ENST00000441438 NDUFA12Q9UI09 145 aa7.44□□□□□ -1.22
SYNE2-206ENST00000441438 HELZ2Q9BYK8 2649 aaKnown RBP7.44□□□□□ -1.22
SYNE2-206ENST00000441438 ADM2Q7Z4H4 148 aa7.44□□□□□ -1.22
SYNE2-206ENST00000441438 UBR5O95071 2799 aaPredicted RBP7.44□□□□□ -1.22
SYNE2-206ENST00000441438 MYO18BQ8IUG5 2567 aa7.44□□□□□ -1.22
SYNE2-206ENST00000441438 LOC107984156A0A0G2JMH3 177 aa7.43□□□□□ -1.22
SYNE2-206ENST00000441438 FAM223BA6NKX1 122 aa7.43□□□□□ -1.22
SYNE2-206ENST00000441438 ZNF22P17026 224 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-206ENST00000441438 ARL17AQ8IVW1 177 aa7.43□□□□□ -1.22
SYNE2-206ENST00000441438 C9orf106Q8NAJ2 232 aa7.43□□□□□ -1.22
SYNE2-206ENST00000441438 PRAC1Q96KF2 57 aa7.43□□□□□ -1.22
SYNE2-206ENST00000441438 C16orf90A8MZG2 172 aa7.43□□□□□ -1.22
SYNE2-206ENST00000441438 GNRH2O43555 120 aa7.43□□□□□ -1.22
SYNE2-206ENST00000441438 IGHV3-48P01763 117 aa7.43□□□□□ -1.22
SYNE2-206ENST00000441438 TET2Q6N021 2002 aaPredicted RBP7.43□□□□□ -1.22
SYNE2-206ENST00000441438 SFTA2Q6UW10 78 aa7.43□□□□□ -1.22
SYNE2-206ENST00000441438 C20orf197Q8N268 126 aa7.43□□□□□ -1.22
SYNE2-206ENST00000441438 DNAJC9-AS1A6NH13 148 aa7.42□□□□□ -1.22
SYNE2-206ENST00000441438 SAA1P0DJI8 122 aaPredicted RBP7.42□□□□□ -1.22
SYNE2-206ENST00000441438 FAM168AQ92567 244 aa7.42□□□□□ -1.22
SYNE2-206ENST00000441438 IGLV5-52A0A0A0MRZ9 124 aa7.41□□□□□ -1.22
SYNE2-206ENST00000441438 B4DSR2 109 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms