RNA–Protein interactions for RNA: ENST00000441222.7

USP46-201, Transcript of ubiquitin specific peptidase 46, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP46, Length 7,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-201ENST00000441222 IGKV2D-26A0A0A0MRZ7 120 aa5.12□□□□□ -1.59
USP46-201ENST00000441222 NDUFA11Q86Y39 141 aa5.12□□□□□ -1.59
USP46-201ENST00000441222 DAND5Q8N907 189 aa5.12□□□□□ -1.59
USP46-201ENST00000441222 GTSF1Q8WW33 167 aa5.12□□□□□ -1.59
USP46-201ENST00000441222 SERP1Q9Y6X1 66 aa5.12□□□□□ -1.59
USP46-201ENST00000441222 CLEC2BQ92478 149 aa5.11□□□□□ -1.59
USP46-201ENST00000441222 C7orf33Q8WU49 177 aa5.11□□□□□ -1.59
USP46-201ENST00000441222 A0A0J9YX75 114 aa5.11□□□□□ -1.59
USP46-201ENST00000441222 SPATA12Q7Z6I5 190 aa5.11□□□□□ -1.59
USP46-201ENST00000441222 FAM236DA0A1B0GTK5 79 aa5.11□□□□□ -1.59
USP46-201ENST00000441222 FAM236CP0DP71 79 aa5.11□□□□□ -1.59
USP46-201ENST00000441222 HILS1P60008 231 aa5.11□□□□□ -1.59
USP46-201ENST00000441222 KRTAP27-1Q3LI81 207 aa5.11□□□□□ -1.59
USP46-201ENST00000441222 Q6ZSR3 168 aa5.11□□□□□ -1.59
USP46-201ENST00000441222 NFE4Q86UQ8 179 aa5.11□□□□□ -1.59
USP46-201ENST00000441222 ZFAND2AQ8N6M9 145 aa5.11□□□□□ -1.59
USP46-201ENST00000441222 ZNF706Q9Y5V0 76 aaPredicted RBP5.11□□□□□ -1.59
USP46-201ENST00000441222 A0A0J9YXY3 114 aa5.1□□□□□ -1.59
USP46-201ENST00000441222 IBA57-AS1B1ANH7 110 aa5.1□□□□□ -1.59
USP46-201ENST00000441222 ZFHX2Q9C0A1 2572 aaPredicted RBP5.1□□□□□ -1.59
USP46-201ENST00000441222 IMUPQ9GZP8 106 aa5.1□□□□□ -1.59
USP46-201ENST00000441222 MSRB1Q9NZV6 116 aa5.1□□□□□ -1.59
USP46-201ENST00000441222 LINC01548A6NM66 108 aa5.1□□□□□ -1.59
USP46-201ENST00000441222 NDUFV3P56181 108 aaKnown RBP5.1□□□□□ -1.59
USP46-201ENST00000441222 HIGD2AQ9BW72 106 aa5.1□□□□□ -1.59
USP46-201ENST00000441222 REG3AQ06141 175 aa5.09□□□□□ -1.59
USP46-201ENST00000441222 ASPHD1Q5U4P2 390 aa5.09□□□□□ -1.59
USP46-201ENST00000441222 SPRY4Q9C004 299 aa5.09□□□□□ -1.59
USP46-201ENST00000441222 CRYGDP07320 174 aa5.09□□□□□ -1.59
USP46-201ENST00000441222 FBXL19-AS1Q494R0 122 aa5.09□□□□□ -1.59
USP46-201ENST00000441222 PATE2Q6UY27 113 aa5.09□□□□□ -1.6
USP46-201ENST00000441222 IGLV1-47P01700 117 aa5.09□□□□□ -1.6
USP46-201ENST00000441222 MUC7Q8TAX7 377 aa5.09□□□□□ -1.6
USP46-201ENST00000441222 ESM1Q9NQ30 184 aa5.08□□□□□ -1.6
USP46-201ENST00000441222 A0A087WZ39 114 aa5.08□□□□□ -1.6
USP46-201ENST00000441222 C20orf197Q8N268 126 aa5.08□□□□□ -1.6
USP46-201ENST00000441222 LINC00269Q8N2A0 174 aa5.08□□□□□ -1.6
USP46-201ENST00000441222 MAP6D1Q9H9H5 199 aa5.08□□□□□ -1.6
USP46-201ENST00000441222 C19orf71A6NCJ1 209 aa5.08□□□□□ -1.6
USP46-201ENST00000441222 LINC00173Q6ZV60 143 aa5.08□□□□□ -1.6
USP46-201ENST00000441222 TRAV26-1A0A087WT03 109 aa5.08□□□□□ -1.6
USP46-201ENST00000441222 TCL1BO95988 128 aa5.08□□□□□ -1.6
USP46-201ENST00000441222 P0DMU3 169 aa5.07□□□□□ -1.6
USP46-201ENST00000441222 FAM231AP0DMU4 169 aa5.07□□□□□ -1.6
USP46-201ENST00000441222 FAM231CP0DMU5 169 aa5.07□□□□□ -1.6
USP46-201ENST00000441222 MIFP14174 115 aa5.07□□□□□ -1.6
USP46-201ENST00000441222 COL4A6Q14031 1691 aa5.07□□□□□ -1.6
USP46-201ENST00000441222 LOXL1Q08397 574 aaPredicted RBP5.07□□□□□ -1.6
USP46-201ENST00000441222 MPLKIPQ8TAP9 179 aa5.07□□□□□ -1.6
USP46-201ENST00000441222 DHRS4-AS1Q9P1J3 65 aa5.07□□□□□ -1.6
USP46-201ENST00000441222 IGKV2-24A0A0C4DH68 120 aa5.07□□□□□ -1.6
USP46-201ENST00000441222 TNFRSF13BO14836 293 aaPredicted RBP5.07□□□□□ -1.6
USP46-201ENST00000441222 PIK3CD-AS1Q5SR53 167 aa5.07□□□□□ -1.6
USP46-201ENST00000441222 RITA1Q96K30 269 aa5.07□□□□□ -1.6
USP46-201ENST00000441222 PRAC2D3DTV9 90 aa5.07□□□□□ -1.6
USP46-201ENST00000441222 TIMM17BO60830 172 aa5.07□□□□□ -1.6
USP46-201ENST00000441222 FAM19A1Q7Z5A9 133 aa5.07□□□□□ -1.6
USP46-201ENST00000441222 FAM19A3Q7Z5A8 133 aa5.06□□□□□ -1.6
USP46-201ENST00000441222 IGLC6P0CF74 106 aa5.06□□□□□ -1.6
USP46-201ENST00000441222 TDRG1Q3Y452 100 aa5.06□□□□□ -1.6
USP46-201ENST00000441222 CHCHD10Q8WYQ3 142 aaPredicted RBP5.06□□□□□ -1.6
USP46-201ENST00000441222 DEFB131BA0A096LNP1 70 aa5.06□□□□□ -1.6
USP46-201ENST00000441222 LINC00322Q6ZN03 302 aaPredicted RBP5.06□□□□□ -1.6
USP46-201ENST00000441222 Q8N9L7 120 aa5.06□□□□□ -1.6
USP46-201ENST00000441222 TRBV30A0A0K0K1B3 111 aa5.06□□□□□ -1.6
USP46-201ENST00000441222 FN1P02751 2386 aaKnown RBP5.06□□□□□ -1.6
USP46-201ENST00000441222 A6NDX4 124 aa5.06□□□□□ -1.6
USP46-201ENST00000441222 UBE2D1P51668 147 aa5.06□□□□□ -1.6
USP46-201ENST00000441222 LINC00474Q9P2X8 69 aa5.06□□□□□ -1.6
USP46-201ENST00000441222 A6NED7 52 aa5.06□□□□□ -1.6
USP46-201ENST00000441222 FSTL3O95633 263 aa5.06□□□□□ -1.6
USP46-201ENST00000441222 GRNP28799 593 aaKnown RBP5.06□□□□□ -1.6
USP46-201ENST00000441222 COX17Q14061 63 aa5.06□□□□□ -1.6
USP46-201ENST00000441222 LRRC75A-AS1Q8N1F1 130 aa5.06□□□□□ -1.6
USP46-201ENST00000441222 LTBP2Q14767 1821 aa5.05□□□□□ -1.6
USP46-201ENST00000441222 IGKV1D-37A0A075B6S9 117 aa5.05□□□□□ -1.6
USP46-201ENST00000441222 FAM222AQ5U5X8 452 aa5.05□□□□□ -1.6
USP46-201ENST00000441222 SIRPDQ9H106 197 aa5.05□□□□□ -1.6
USP46-201ENST00000441222 SDIM1Q6ZPB5 146 aa5.05□□□□□ -1.6
USP46-201ENST00000441222 DNAJC9-AS1A6NH13 148 aa5.05□□□□□ -1.6
USP46-201ENST00000441222 WFDC10BQ8IUB3 73 aa5.05□□□□□ -1.6
USP46-201ENST00000441222 A0A1B0GXF2 115 aa5.05□□□□□ -1.6
USP46-201ENST00000441222 WT1P19544 449 aaPredicted RBP5.05□□□□□ -1.6
USP46-201ENST00000441222 TRBV6-8A0A0A6YYG3 113 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 NUPR1O60356 82 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 CCKP06307 115 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 ODF3L1Q8IXM7 274 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 ADORA2A-AS1P86434 159 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 C9orf85Q96MD7 179 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 TRBV6-4A0A1B0GX49 114 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 SERP2Q8N6R1 65 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 IGF1P05019 195 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 TEX49A0A1B0GTD5 131 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 DEFB4AO15263 64 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 ENHOQ6UWT2 76 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 Q8N7P7 452 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 ZNF524Q96C55 264 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 UBE2D4Q9Y2X8 147 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 TMEM223A0PJW6 202 aa5.04□□□□□ -1.6
USP46-201ENST00000441222 RNASE8Q8TDE3 154 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms