RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 PTPRBP23467 1997 aa4.81□□□□□ -1.64
CNOT1-202ENST00000441024 PCNX1Q96RV3 2341 aa4.81□□□□□ -1.64
CNOT1-202ENST00000441024 H3BT86 120 aa4.81□□□□□ -1.64
CNOT1-202ENST00000441024 ZFAND2AQ8N6M9 145 aa4.81□□□□□ -1.64
CNOT1-202ENST00000441024 NEXN-AS1Q8NBZ9 246 aa4.81□□□□□ -1.64
CNOT1-202ENST00000441024 PCNX3Q9H6A9 2034 aa4.81□□□□□ -1.64
CNOT1-202ENST00000441024 DEFB1P60022 68 aa4.81□□□□□ -1.64
CNOT1-202ENST00000441024 C15orf53Q8NAA6 179 aa4.81□□□□□ -1.64
CNOT1-202ENST00000441024 TRBV6-5A0A0K0K1A5 114 aa4.81□□□□□ -1.64
CNOT1-202ENST00000441024 TM2D2Q9BX73 214 aa4.81□□□□□ -1.64
CNOT1-202ENST00000441024 CHD3Q12873 2000 aaKnown RBP4.8□□□□□ -1.64
CNOT1-202ENST00000441024 PSMB8P28062 276 aa4.8□□□□□ -1.64
CNOT1-202ENST00000441024 CRIP1P50238 77 aa4.8□□□□□ -1.64
CNOT1-202ENST00000441024 HAMPP81172 84 aa4.8□□□□□ -1.64
CNOT1-202ENST00000441024 HIST2H2BCQ6DN03 193 aa4.8□□□□□ -1.64
CNOT1-202ENST00000441024 OPRPNQ99935 248 aaPredicted RBP4.8□□□□□ -1.64
CNOT1-202ENST00000441024 TRBV10-2A0A0K0K1G8 114 aa4.8□□□□□ -1.64
CNOT1-202ENST00000441024 IGHV3-30-3P0DP02 117 aa4.8□□□□□ -1.64
CNOT1-202ENST00000441024 MED12LQ86YW9 2145 aa4.8□□□□□ -1.64
CNOT1-202ENST00000441024 IGHV4-4A0A075B6R2 117 aa4.8□□□□□ -1.64
CNOT1-202ENST00000441024 A0A0B4J2C4 111 aa4.8□□□□□ -1.64
CNOT1-202ENST00000441024 IGLV1-40P01703 118 aa4.8□□□□□ -1.64
CNOT1-202ENST00000441024 MIAQ16674 131 aa4.8□□□□□ -1.64
CNOT1-202ENST00000441024 RS1O15537 224 aa4.8□□□□□ -1.64
CNOT1-202ENST00000441024 RNF185Q96GF1 192 aa4.8□□□□□ -1.64
CNOT1-202ENST00000441024 A0A0J9YXY3 114 aa4.79□□□□□ -1.64
CNOT1-202ENST00000441024 JMJD7-PLA2G4BH0Y9G9 81 aa4.79□□□□□ -1.64
CNOT1-202ENST00000441024 CRIP2P52943 208 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-202ENST00000441024 SPANXB1Q9NS25 103 aaPredicted RBP4.79□□□□□ -1.64
CNOT1-202ENST00000441024 ATMQ13315 3056 aa4.79□□□□□ -1.64
CNOT1-202ENST00000441024 ETDCA0A1B0GVM5 59 aa4.79□□□□□ -1.64
CNOT1-202ENST00000441024 BRI3O95415 125 aa4.79□□□□□ -1.64
CNOT1-202ENST00000441024 PIK3CD-AS1Q5SR53 167 aa4.79□□□□□ -1.64
CNOT1-202ENST00000441024 ZNF702PQ9H963 129 aa4.79□□□□□ -1.64
CNOT1-202ENST00000441024 PYGO1Q9Y3Y4 419 aa4.79□□□□□ -1.64
CNOT1-202ENST00000441024 Q6ZSV7 163 aa4.79□□□□□ -1.64
CNOT1-202ENST00000441024 TP53TG3Q9ULZ0 132 aa4.79□□□□□ -1.64
CNOT1-202ENST00000441024 IGHV3-30P01768 117 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 IGHV3-33P01772 117 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 IGHV3-30-5P0DP03 117 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 TIRAPP58753 221 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 ZNF843Q8N446 348 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 SPAG11BQ08648 103 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 DEFB135Q30KP9 77 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 Q6ZUT4 128 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 NFE4Q86UQ8 179 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 ZNF580Q9UK33 172 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 M0QY20 66 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 TTTY13Q9BZ97 58 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 TRBV27A0A0K0K1C4 114 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 TRBV6-4A0A1B0GX49 114 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 TMEM223A0PJW6 202 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 UBE2BP63146 152 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 SPTAN1Q13813 2472 aaKnown RBP4.78□□□□□ -1.64
CNOT1-202ENST00000441024 ARFGEF3Q5TH69 2177 aa4.78□□□□□ -1.64
CNOT1-202ENST00000441024 KLLNB2CW77 178 aa4.77□□□□□ -1.65
CNOT1-202ENST00000441024 F8W735 103 aaPredicted RBP4.77□□□□□ -1.65
CNOT1-202ENST00000441024 PDE6GP18545 87 aa4.77□□□□□ -1.65
CNOT1-202ENST00000441024 FUSP35637 526 aaKnown RBP eCLIP4.77□□□□□ -1.65
CNOT1-202ENST00000441024 NBASA2RRP1 2371 aa4.77□□□□□ -1.65
CNOT1-202ENST00000441024 ZFHX2Q9C0A1 2572 aaPredicted RBP4.77□□□□□ -1.65
CNOT1-202ENST00000441024 TRACP01848 142 aa4.77□□□□□ -1.65
CNOT1-202ENST00000441024 CFAP126Q5VTH2 177 aa4.77□□□□□ -1.65
CNOT1-202ENST00000441024 Q6ZTI0 123 aa4.77□□□□□ -1.65
CNOT1-202ENST00000441024 CNFNQ9BYD5 112 aa4.77□□□□□ -1.65
CNOT1-202ENST00000441024 Q9HAA7 133 aa4.77□□□□□ -1.65
CNOT1-202ENST00000441024 IGLV10-54A0A075B6I4 117 aa4.77□□□□□ -1.65
CNOT1-202ENST00000441024 RPL18AQ02543 176 aaKnown RBP4.77□□□□□ -1.65
CNOT1-202ENST00000441024 FOXI1Q12951 378 aa4.77□□□□□ -1.65
CNOT1-202ENST00000441024 IL17DQ8TAD2 202 aa4.77□□□□□ -1.65
CNOT1-202ENST00000441024 IGLV4-3A0A075B6K6 122 aa4.77□□□□□ -1.65
CNOT1-202ENST00000441024 UFSP1Q6NVU6 142 aa4.77□□□□□ -1.65
CNOT1-202ENST00000441024 MIR7-3HGQ8N6C7 128 aa4.77□□□□□ -1.65
CNOT1-202ENST00000441024 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.77□□□□□ -1.658e-7■■■■□ 25.7
CNOT1-202ENST00000441024 WFDC11Q8NEX6 87 aa4.76□□□□□ -1.65
CNOT1-202ENST00000441024 C9orf85Q96MD7 179 aa4.76□□□□□ -1.65
CNOT1-202ENST00000441024 KLK5Q9Y337 293 aaPredicted RBP4.76□□□□□ -1.65
CNOT1-202ENST00000441024 ARHGAP21Q5T5U3 1957 aa4.76□□□□□ -1.65
CNOT1-202ENST00000441024 A0A0C4DFX4 3053 aa4.76□□□□□ -1.65
CNOT1-202ENST00000441024 MUC6Q6W4X9 2439 aa4.76□□□□□ -1.65
CNOT1-202ENST00000441024 TIMM17BO60830 172 aa4.76□□□□□ -1.65
CNOT1-202ENST00000441024 MIFP14174 115 aa4.76□□□□□ -1.65
CNOT1-202ENST00000441024 ZNF22P17026 224 aaPredicted RBP4.76□□□□□ -1.65
CNOT1-202ENST00000441024 WFDC2Q14508 124 aa4.76□□□□□ -1.65
CNOT1-202ENST00000441024 DIRC1Q969H9 104 aa4.76□□□□□ -1.65
CNOT1-202ENST00000441024 MRPS12O15235 138 aaKnown RBP4.76□□□□□ -1.65
CNOT1-202ENST00000441024 NRACQ8N912 160 aa4.76□□□□□ -1.65
CNOT1-202ENST00000441024 MRAPQ8TCY5 172 aa4.76□□□□□ -1.65
CNOT1-202ENST00000441024 TMEM256-PLSCR3K7ERE1 68 aa4.75□□□□□ -1.65
CNOT1-202ENST00000441024 MRGPRG-AS1Q2M3A8 158 aa4.75□□□□□ -1.65
CNOT1-202ENST00000441024 LINC00467Q9BRT7 94 aa4.75□□□□□ -1.65
CNOT1-202ENST00000441024 KLK12Q9UKR0 248 aa4.75□□□□□ -1.65
CNOT1-202ENST00000441024 G3V4G9 280 aa4.75□□□□□ -1.65
CNOT1-202ENST00000441024 C14orf177Q52M58 125 aa4.75□□□□□ -1.65
CNOT1-202ENST00000441024 COX8CQ7Z4L0 72 aa4.75□□□□□ -1.65
CNOT1-202ENST00000441024 ANKHD1Q8IWZ3 2542 aaKnown RBP4.75□□□□□ -1.65
CNOT1-202ENST00000441024 IBA57-AS1B1ANH7 110 aa4.75□□□□□ -1.65
CNOT1-202ENST00000441024 RNASE3P12724 160 aaKnown RBP4.75□□□□□ -1.65
CNOT1-202ENST00000441024 HIST2H2BDQ6DRA6 164 aa4.75□□□□□ -1.65
CNOT1-202ENST00000441024 NBEAQ8NFP9 2946 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms