RNA–Protein interactions for RNA: ENST00000439886.5

SMPD4-209, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,371 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-209ENST00000439886 TRBV10-2A0A0K0K1G8 114 aa8.75□□□□□ -1.01
SMPD4-209ENST00000439886 Q5XG85 94 aa8.75□□□□□ -1.01
SMPD4-209ENST00000439886 SBSPONQ8IVN8 264 aa8.75□□□□□ -1.01
SMPD4-209ENST00000439886 FAM19A4Q96LR4 140 aa8.75□□□□□ -1.01
SMPD4-209ENST00000439886 TRBV7-1A0A0A6YYK4 115 aa8.75□□□□□ -1.01
SMPD4-209ENST00000439886 SPANXCQ9NY87 97 aa8.75□□□□□ -1.01
SMPD4-209ENST00000439886 NDUFA12Q9UI09 145 aa8.75□□□□□ -1.01
SMPD4-209ENST00000439886 ICOSQ9Y6W8 199 aa8.75□□□□□ -1.01
SMPD4-209ENST00000439886 LEPROTO15243 131 aa8.75□□□□□ -1.01
SMPD4-209ENST00000439886 DGAT2L7PQ6IED9 249 aa8.75□□□□□ -1.01
SMPD4-209ENST00000439886 IGHV4-4A0A075B6R2 117 aa8.74□□□□□ -1.01
SMPD4-209ENST00000439886 A0A0J9YXY3 114 aa8.74□□□□□ -1.01
SMPD4-209ENST00000439886 M0R1W7 72 aa8.74□□□□□ -1.01
SMPD4-209ENST00000439886 OXTP01178 125 aa8.74□□□□□ -1.01
SMPD4-209ENST00000439886 P0DMU3 169 aa8.74□□□□□ -1.01
SMPD4-209ENST00000439886 FAM231AP0DMU4 169 aa8.74□□□□□ -1.01
SMPD4-209ENST00000439886 FAM231CP0DMU5 169 aa8.74□□□□□ -1.01
SMPD4-209ENST00000439886 SPINK13Q1W4C9 94 aa8.74□□□□□ -1.01
SMPD4-209ENST00000439886 SETD2Q9BYW2 2564 aaPredicted RBP8.74□□□□□ -1.01
SMPD4-209ENST00000439886 IGHV1-69DA0A0B4J2H0 117 aa8.74□□□□□ -1.01
SMPD4-209ENST00000439886 IGFL3Q6UXB1 125 aa8.74□□□□□ -1.01
SMPD4-209ENST00000439886 RETNQ9HD89 108 aa8.74□□□□□ -1.01
SMPD4-209ENST00000439886 IGHV3-38A0A0C4DH36 116 aa8.73□□□□□ -1.01
SMPD4-209ENST00000439886 IGHV3-30-3P0DP02 117 aa8.73□□□□□ -1.01
SMPD4-209ENST00000439886 TMEM258P61165 79 aa8.73□□□□□ -1.01
SMPD4-209ENST00000439886 TMEM86BQ8N661 226 aa8.73□□□□□ -1.01
SMPD4-209ENST00000439886 MINOS1Q5TGZ0 78 aa8.73□□□□□ -1.01
SMPD4-209ENST00000439886 LY6G5BQ8NDX9 201 aa8.72□□□□□ -1.01
SMPD4-209ENST00000439886 C2orf48Q96LS8 159 aa8.72□□□□□ -1.01
SMPD4-209ENST00000439886 PTPN13Q12923 2485 aa8.72□□□□□ -1.01
SMPD4-209ENST00000439886 MYO9AB2RTY4 2548 aa8.72□□□□□ -1.01
SMPD4-209ENST00000439886 TRBV7-7A0A0K0K1E9 115 aa8.72□□□□□ -1.01
SMPD4-209ENST00000439886 ODF3BA8MYP8 253 aa8.72□□□□□ -1.01
SMPD4-209ENST00000439886 H7C423 109 aa8.72□□□□□ -1.01
SMPD4-209ENST00000439886 TIMM17AQ99595 171 aa8.72□□□□□ -1.01
SMPD4-209ENST00000439886 TMEM223A0PJW6 202 aa8.72□□□□□ -1.01
SMPD4-209ENST00000439886 RNF223E7ERA6 249 aa8.72□□□□□ -1.01
SMPD4-209ENST00000439886 EIF4EBP3O60516 100 aaPredicted RBP8.72□□□□□ -1.01
SMPD4-209ENST00000439886 POLR2KP53803 58 aaKnown RBP8.72□□□□□ -1.01
SMPD4-209ENST00000439886 MRPL53Q96EL3 112 aaKnown RBP8.71□□□□□ -1.01
SMPD4-209ENST00000439886 CYSTM1Q9H1C7 97 aa8.71□□□□□ -1.01
SMPD4-209ENST00000439886 MINOS1-NBL1R4GNA1 71 aa8.71□□□□□ -1.02
SMPD4-209ENST00000439886 ADAMTSL4-AS1Q5T5F5 129 aa8.7□□□□□ -1.02
SMPD4-209ENST00000439886 POM121L12Q8N7R1 296 aa8.7□□□□□ -1.02
SMPD4-209ENST00000439886 COL27A1Q8IZC6 1860 aaPredicted RBP8.7□□□□□ -1.02
SMPD4-209ENST00000439886 PRM2P04554 102 aa8.7□□□□□ -1.02
SMPD4-209ENST00000439886 CRYGAP11844 174 aa8.7□□□□□ -1.02
SMPD4-209ENST00000439886 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.7□□□□□ -1.02
SMPD4-209ENST00000439886 A0A0B4J2C4 111 aa8.7□□□□□ -1.02
SMPD4-209ENST00000439886 IGKV2-29A2NJV5 120 aaPredicted RBP8.7□□□□□ -1.02
SMPD4-209ENST00000439886 PROK1P58294 105 aa8.7□□□□□ -1.02
SMPD4-209ENST00000439886 CIRBPQ14011 172 aaKnown RBP8.7□□□□□ -1.02
SMPD4-209ENST00000439886 IGHV3-16A0A0C4DH30 117 aa8.69□□□□□ -1.02
SMPD4-209ENST00000439886 I3L3M4 83 aa8.69□□□□□ -1.02
SMPD4-209ENST00000439886 NBL1P41271 181 aa8.69□□□□□ -1.02
SMPD4-209ENST00000439886 LENEPQ9Y5L5 61 aa8.69□□□□□ -1.02
SMPD4-209ENST00000439886 SYNJ2BPP57105 145 aa8.69□□□□□ -1.02
SMPD4-209ENST00000439886 Q8N6K4 173 aa8.69□□□□□ -1.02
SMPD4-209ENST00000439886 USP9YO00507 2555 aaPredicted RBP8.68□□□□□ -1.02
SMPD4-209ENST00000439886 IGKV3OR2-268A0A0C4DH90 116 aa8.68□□□□□ -1.02
SMPD4-209ENST00000439886 HOXD3P31249 432 aaPredicted RBP8.68□□□□□ -1.02
SMPD4-209ENST00000439886 CELSR1Q9NYQ6 3014 aa8.68□□□□□ -1.02
SMPD4-209ENST00000439886 C20orf203Q8NBC4 194 aa8.68□□□□□ -1.02
SMPD4-209ENST00000439886 IGLV4-3A0A075B6K6 122 aa8.67□□□□□ -1.02
SMPD4-209ENST00000439886 ATOX1O00244 68 aa8.67□□□□□ -1.02
SMPD4-209ENST00000439886 Q8NA96 180 aa8.67□□□□□ -1.02
SMPD4-209ENST00000439886 ITLN2Q8WWU7 325 aaPredicted RBP8.67□□□□□ -1.02
SMPD4-209ENST00000439886 BPESC1Q9GZL8 116 aa8.67□□□□□ -1.02
SMPD4-209ENST00000439886 IMUPQ9GZP8 106 aa8.67□□□□□ -1.02
SMPD4-209ENST00000439886 EBI3Q14213 229 aa8.67□□□□□ -1.02
SMPD4-209ENST00000439886 AMELXQ99217 191 aa8.67□□□□□ -1.02
SMPD4-209ENST00000439886 SONP18583 2426 aaKnown RBP8.67□□□□□ -1.02
SMPD4-209ENST00000439886 IGHV3OR16-12A0A075B7B8 117 aa8.66□□□□□ -1.02
SMPD4-209ENST00000439886 LINC00315P59091 139 aa8.66□□□□□ -1.02
SMPD4-209ENST00000439886 BLCAPP62952 87 aa8.66□□□□□ -1.02
SMPD4-209ENST00000439886 TRBV30A0A0K0K1B3 111 aa8.66□□□□□ -1.02
SMPD4-209ENST00000439886 C9orf85Q96MD7 179 aa8.66□□□□□ -1.02
SMPD4-209ENST00000439886 ATP5G1P05496 136 aa8.65□□□□□ -1.02
SMPD4-209ENST00000439886 CDSNQ15517 529 aa8.65□□□□□ -1.02
SMPD4-209ENST00000439886 TRBV27A0A0K0K1C4 114 aa8.65□□□□□ -1.02
SMPD4-209ENST00000439886 M0QY20 66 aa8.65□□□□□ -1.02
SMPD4-209ENST00000439886 C5orf56Q8N8D9 126 aa8.65□□□□□ -1.02
SMPD4-209ENST00000439886 MOB4Q9Y3A3 225 aa8.65□□□□□ -1.02
SMPD4-209ENST00000439886 IGHV4OR15-8A0A075B7B6 117 aa8.65□□□□□ -1.03
SMPD4-209ENST00000439886 A0A087WW49 117 aa8.65□□□□□ -1.03
SMPD4-209ENST00000439886 H3BUX3 64 aa8.65□□□□□ -1.03
SMPD4-209ENST00000439886 NDUFA4O00483 81 aa8.65□□□□□ -1.03
SMPD4-209ENST00000439886 NXPH4O95158 308 aa8.65□□□□□ -1.03
SMPD4-209ENST00000439886 RHOHQ15669 191 aa8.65□□□□□ -1.03
SMPD4-209ENST00000439886 KIF25-AS1Q9Y6Z4 181 aa8.65□□□□□ -1.03
SMPD4-209ENST00000439886 HIVEP3Q5T1R4 2406 aa8.65□□□□□ -1.03
SMPD4-209ENST00000439886 CUBNO60494 3623 aa8.65□□□□□ -1.03
SMPD4-209ENST00000439886 TLN2Q9Y4G6 2542 aa8.65□□□□□ -1.03
SMPD4-209ENST00000439886 PEMTQ9UBM1 199 aa8.64□□□□□ -1.03
SMPD4-209ENST00000439886 SNRPD3P62318 126 aaKnown RBP8.64□□□□□ -1.03
SMPD4-209ENST00000439886 Q9HAA7 133 aa8.64□□□□□ -1.03
SMPD4-209ENST00000439886 DAZ1Q9NQZ3 744 aaKnown RBP8.64□□□□□ -1.03
SMPD4-209ENST00000439886 IGHV1OR15-1A0A075B7D0 117 aa8.64□□□□□ -1.03
SMPD4-209ENST00000439886 H3BT86 120 aa8.64□□□□□ -1.03
SMPD4-209ENST00000439886 TOMM7Q9P0U1 55 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms