RNA–Protein interactions for RNA: ENST00000439561.6

COPB1-202, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,382 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-202ENST00000439561 KIF25-AS1Q9Y6Z4 181 aa6.72□□□□□ -1.33
COPB1-202ENST00000439561 TRBV7-9A0A0J9YWB2 115 aa6.72□□□□□ -1.33
COPB1-202ENST00000439561 IGHV3-53P01767 116 aa6.72□□□□□ -1.33
COPB1-202ENST00000439561 DEFB131AP59861 70 aa6.72□□□□□ -1.33
COPB1-202ENST00000439561 LY6DQ14210 128 aa6.72□□□□□ -1.33
COPB1-202ENST00000439561 ADAMTSL4-AS1Q5T5F5 129 aa6.72□□□□□ -1.33
COPB1-202ENST00000439561 C10orf99Q6UWK7 81 aa6.72□□□□□ -1.33
COPB1-202ENST00000439561 ZNF292O60281 2723 aa6.72□□□□□ -1.33
COPB1-202ENST00000439561 H7C423 109 aa6.71□□□□□ -1.33
COPB1-202ENST00000439561 LGALS9O00182 355 aa6.71□□□□□ -1.33
COPB1-202ENST00000439561 C11orf71Q6IPW1 123 aa6.71□□□□□ -1.33
COPB1-202ENST00000439561 PIMREGQ9BSJ6 248 aa6.71□□□□□ -1.33
COPB1-202ENST00000439561 SOCS3O14543 225 aa6.71□□□□□ -1.34
COPB1-202ENST00000439561 C9orf153Q5TBE3 101 aa6.71□□□□□ -1.34
COPB1-202ENST00000439561 GAGE2AQ6NT46 116 aa6.71□□□□□ -1.34
COPB1-202ENST00000439561 PRIMA1Q86XR5 153 aa6.71□□□□□ -1.34
COPB1-202ENST00000439561 IGHV1-58A0A0C4DH39 117 aa6.71□□□□□ -1.34
COPB1-202ENST00000439561 KLLNB2CW77 178 aa6.71□□□□□ -1.34
COPB1-202ENST00000439561 HOXD3P31249 432 aaPredicted RBP6.71□□□□□ -1.34
COPB1-202ENST00000439561 Q9H8V8 135 aa6.71□□□□□ -1.34
COPB1-202ENST00000439561 SPTBN4Q9H254 2564 aa6.7□□□□□ -1.34
COPB1-202ENST00000439561 IGHV4-61A0A0C4DH41 118 aa6.7□□□□□ -1.34
COPB1-202ENST00000439561 NSUN5P1Q3KNT7 163 aa6.7□□□□□ -1.34
COPB1-202ENST00000439561 DCHS2Q6V1P9 2916 aa6.7□□□□□ -1.34
COPB1-202ENST00000439561 CITED1Q99966 193 aa6.7□□□□□ -1.34
COPB1-202ENST00000439561 TRBV30A0A0K0K1B3 111 aa6.69□□□□□ -1.34
COPB1-202ENST00000439561 DNAL4O96015 105 aa6.69□□□□□ -1.34
COPB1-202ENST00000439561 RPL32P62910 135 aaKnown RBP6.69□□□□□ -1.34
COPB1-202ENST00000439561 MIAQ16674 131 aa6.69□□□□□ -1.34
COPB1-202ENST00000439561 ODF3Q96PU9 254 aa6.69□□□□□ -1.34
COPB1-202ENST00000439561 A0A0J9YX75 114 aa6.69□□□□□ -1.34
COPB1-202ENST00000439561 NHLRC4P0CG21 123 aaPredicted RBP6.69□□□□□ -1.34
COPB1-202ENST00000439561 C19orf54Q5BKX5 351 aa6.69□□□□□ -1.34
COPB1-202ENST00000439561 SBSPONQ8IVN8 264 aa6.69□□□□□ -1.34
COPB1-202ENST00000439561 DYNLRB2Q8TF09 96 aa6.69□□□□□ -1.34
COPB1-202ENST00000439561 CDKN2A-AS1Q9UH64 79 aa6.69□□□□□ -1.34
COPB1-202ENST00000439561 H3BT86 120 aa6.69□□□□□ -1.34
COPB1-202ENST00000439561 EIF4EBP3O60516 100 aaPredicted RBP6.69□□□□□ -1.34
COPB1-202ENST00000439561 FBXL19-AS1Q494R0 122 aa6.69□□□□□ -1.34
COPB1-202ENST00000439561 MAPK1IP1LQ8NDC0 245 aa6.69□□□□□ -1.34
COPB1-202ENST00000439561 AMELXQ99217 191 aa6.69□□□□□ -1.34
COPB1-202ENST00000439561 POLQO75417 2590 aa6.69□□□□□ -1.34
COPB1-202ENST00000439561 SONP18583 2426 aaKnown RBP6.68□□□□□ -1.34
COPB1-202ENST00000439561 TRBV6-5A0A0K0K1A5 114 aa6.68□□□□□ -1.34
COPB1-202ENST00000439561 DEFB136Q30KP8 78 aa6.68□□□□□ -1.34
COPB1-202ENST00000439561 OR13C6PQ8NH95 151 aa6.68□□□□□ -1.34
COPB1-202ENST00000439561 CCL19Q99731 98 aa6.68□□□□□ -1.34
COPB1-202ENST00000439561 EDA2RQ9HAV5 297 aa6.68□□□□□ -1.34
COPB1-202ENST00000439561 IGHG2P01859 326 aa6.68□□□□□ -1.34
COPB1-202ENST00000439561 POM121L12Q8N7R1 296 aa6.68□□□□□ -1.34
COPB1-202ENST00000439561 UBE2E2Q96LR5 201 aa6.68□□□□□ -1.34
COPB1-202ENST00000439561 COL12A1Q99715 3063 aa6.68□□□□□ -1.34
COPB1-202ENST00000439561 Q9UF83 564 aa6.68□□□□□ -1.34
COPB1-202ENST00000439561 RNASE1P07998 156 aaKnown RBP6.67□□□□□ -1.34
COPB1-202ENST00000439561 DCANP1Q8TF63 244 aa6.67□□□□□ -1.34
COPB1-202ENST00000439561 VSIG2Q96IQ7 327 aa6.67□□□□□ -1.34
COPB1-202ENST00000439561 LINC00467Q9BRT7 94 aa6.67□□□□□ -1.34
COPB1-202ENST00000439561 IGHV4-59P01825 116 aa6.67□□□□□ -1.34
COPB1-202ENST00000439561 SHISA2Q6UWI4 295 aa6.67□□□□□ -1.34
COPB1-202ENST00000439561 Q9HAA7 133 aa6.67□□□□□ -1.34
COPB1-202ENST00000439561 TRGV1A0A0A0MS02 117 aa6.66□□□□□ -1.34
COPB1-202ENST00000439561 UBE2L6O14933 153 aa6.66□□□□□ -1.34
COPB1-202ENST00000439561 BAALC-AS2P0C853 105 aa6.66□□□□□ -1.34
COPB1-202ENST00000439561 HIST2H2BDQ6DRA6 164 aa6.66□□□□□ -1.34
COPB1-202ENST00000439561 TMEM61Q8N0U2 210 aa6.66□□□□□ -1.34
COPB1-202ENST00000439561 C9orf85Q96MD7 179 aa6.66□□□□□ -1.34
COPB1-202ENST00000439561 C11orf68Q9H3H3 251 aaKnown RBP6.66□□□□□ -1.34
COPB1-202ENST00000439561 XCL2Q9UBD3 114 aa6.66□□□□□ -1.34
COPB1-202ENST00000439561 NXPH4O95158 308 aa6.66□□□□□ -1.34
COPB1-202ENST00000439561 ZNF415Q09FC8 603 aa6.66□□□□□ -1.34
COPB1-202ENST00000439561 MRPL23Q16540 153 aaKnown RBP6.66□□□□□ -1.34
COPB1-202ENST00000439561 C11orf44Q8N8P7 122 aa6.66□□□□□ -1.34
COPB1-202ENST00000439561 LST1O00453 97 aa6.66□□□□□ -1.34
COPB1-202ENST00000439561 APRG1Q8IVJ8 170 aa6.65□□□□□ -1.34
COPB1-202ENST00000439561 NDUFA7O95182 113 aa6.65□□□□□ -1.35
COPB1-202ENST00000439561 LINC00158P58513 81 aa6.65□□□□□ -1.35
COPB1-202ENST00000439561 FAM19A4Q96LR4 140 aa6.65□□□□□ -1.35
COPB1-202ENST00000439561 CCDC168Q8NDH2 2452 aa6.64□□□□□ -1.35
COPB1-202ENST00000439561 H3BUA1 57 aa6.64□□□□□ -1.35
COPB1-202ENST00000439561 CRPP02741 224 aa6.64□□□□□ -1.35
COPB1-202ENST00000439561 DAZ2Q13117 558 aaKnown RBP6.64□□□□□ -1.35
COPB1-202ENST00000439561 DAZ4Q86SG3 579 aaKnown RBP6.64□□□□□ -1.35
COPB1-202ENST00000439561 DAZ3Q9NR90 486 aaKnown RBP6.64□□□□□ -1.35
COPB1-202ENST00000439561 SPANXA1Q9NS26 97 aa6.64□□□□□ -1.35
COPB1-202ENST00000439561 MSMBP08118 114 aa6.64□□□□□ -1.35
COPB1-202ENST00000439561 MRPS36P82909 103 aaKnown RBP6.64□□□□□ -1.35
COPB1-202ENST00000439561 CFHR3Q02985 330 aa6.64□□□□□ -1.35
COPB1-202ENST00000439561 PIK3CD-AS1Q5SR53 167 aa6.64□□□□□ -1.35
COPB1-202ENST00000439561 JMJD1CQ15652 2540 aa6.63□□□□□ -1.35
COPB1-202ENST00000439561 IGHV4-30-2A0A087WSY4 118 aa6.63□□□□□ -1.35
COPB1-202ENST00000439561 K7EQG2 157 aa6.63□□□□□ -1.35
COPB1-202ENST00000439561 SLURP1P55000 103 aa6.63□□□□□ -1.35
COPB1-202ENST00000439561 COPS9Q8WXC6 57 aa6.63□□□□□ -1.35
COPB1-202ENST00000439561 IGKV3D-7A0A0C4DH55 119 aa6.63□□□□□ -1.35
COPB1-202ENST00000439561 TINCRA0A1B0GVN0 87 aa6.63□□□□□ -1.35
COPB1-202ENST00000439561 A6NDX4 124 aa6.63□□□□□ -1.35
COPB1-202ENST00000439561 GNLYP22749 145 aa6.63□□□□□ -1.35
COPB1-202ENST00000439561 LINC00308Q8TCZ7 52 aa6.63□□□□□ -1.35
COPB1-202ENST00000439561 C19orf84I3L1E1 186 aa6.63□□□□□ -1.35
COPB1-202ENST00000439561 K7EMT4 169 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 132.2 ms