RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 SNRPD3P62318 126 aaKnown RBP11.24□□□□□ -0.61
CDC42EP4-202ENST00000439510 UNC79Q9P2D8 2635 aa11.24□□□□□ -0.61
CDC42EP4-202ENST00000439510 K7EQG2 157 aa11.24□□□□□ -0.61
CDC42EP4-202ENST00000439510 IGHV3-64A0A075B6Q5 118 aa11.23□□□□□ -0.61
CDC42EP4-202ENST00000439510 A0A0J9YXY3 114 aa11.23□□□□□ -0.61
CDC42EP4-202ENST00000439510 RNF152Q8N8N0 203 aa11.23□□□□□ -0.61
CDC42EP4-202ENST00000439510 C10orf105Q8TEF2 133 aa11.23□□□□□ -0.61
CDC42EP4-202ENST00000439510 EDA2RQ9HAV5 297 aa11.23□□□□□ -0.61
CDC42EP4-202ENST00000439510 PYGO1Q9Y3Y4 419 aa11.23□□□□□ -0.61
CDC42EP4-202ENST00000439510 IGKV3-20P01619 116 aa11.23□□□□□ -0.61
CDC42EP4-202ENST00000439510 CITED2Q99967 270 aaPredicted RBP11.22□□□□□ -0.61
CDC42EP4-202ENST00000439510 SPINK13Q1W4C9 94 aa11.22□□□□□ -0.61
CDC42EP4-202ENST00000439510 FAM104AQ969W3 186 aa11.22□□□□□ -0.61
CDC42EP4-202ENST00000439510 LITAFQ99732 161 aa11.22□□□□□ -0.61
CDC42EP4-202ENST00000439510 IGHV3-30-3P0DP02 117 aa11.22□□□□□ -0.61
CDC42EP4-202ENST00000439510 MRPS36P82909 103 aaKnown RBP11.22□□□□□ -0.61
CDC42EP4-202ENST00000439510 ATXN8Q156A1 80 aa11.22□□□□□ -0.61
CDC42EP4-202ENST00000439510 TLN2Q9Y4G6 2542 aa11.21□□□□□ -0.61
CDC42EP4-202ENST00000439510 IGHV4-30-2A0A087WSY4 118 aa11.21□□□□□ -0.61
CDC42EP4-202ENST00000439510 ELANEP08246 267 aa11.21□□□□□ -0.61
CDC42EP4-202ENST00000439510 NOTCH2Q04721 2471 aa11.21□□□□□ -0.61
CDC42EP4-202ENST00000439510 TRBV30A0A0K0K1B3 111 aa11.21□□□□□ -0.62
CDC42EP4-202ENST00000439510 H7C2G1 150 aa11.21□□□□□ -0.62
CDC42EP4-202ENST00000439510 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.21□□□□□ -0.62
CDC42EP4-202ENST00000439510 TEX15Q9BXT5 2789 aa11.2□□□□□ -0.62
CDC42EP4-202ENST00000439510 TRGV11A0A075B6L2 103 aa11.2□□□□□ -0.62
CDC42EP4-202ENST00000439510 PRRC2AP48634 2157 aaKnown RBP11.2□□□□□ -0.62
CDC42EP4-202ENST00000439510 TRAV25A0A0B4J276 109 aa11.2□□□□□ -0.62
CDC42EP4-202ENST00000439510 LINC01620Q4KN68 170 aa11.2□□□□□ -0.62
CDC42EP4-202ENST00000439510 TIMM21Q9BVV7 248 aa11.2□□□□□ -0.62
CDC42EP4-202ENST00000439510 CSPG4Q6UVK1 2322 aa11.2□□□□□ -0.62
CDC42EP4-202ENST00000439510 MAPK1IP1LQ8NDC0 245 aa11.19□□□□□ -0.62
CDC42EP4-202ENST00000439510 B5MCH6 92 aa11.19□□□□□ -0.62
CDC42EP4-202ENST00000439510 MSMBP08118 114 aa11.19□□□□□ -0.62
CDC42EP4-202ENST00000439510 CREBBPQ92793 2442 aa11.19□□□□□ -0.62
CDC42EP4-202ENST00000439510 CD28P10747 220 aa11.18□□□□□ -0.62
CDC42EP4-202ENST00000439510 Q1RN00 199 aa11.18□□□□□ -0.62
CDC42EP4-202ENST00000439510 ZFAND6Q6FIF0 208 aa11.18□□□□□ -0.62
CDC42EP4-202ENST00000439510 ITPR3Q14573 2671 aa11.18□□□□□ -0.62
CDC42EP4-202ENST00000439510 PDZD2O15018 2839 aa11.18□□□□□ -0.62
CDC42EP4-202ENST00000439510 TMEM89A2RUT3 159 aa11.18□□□□□ -0.62
CDC42EP4-202ENST00000439510 RPL13AP40429 203 aaKnown RBP11.18□□□□□ -0.62
CDC42EP4-202ENST00000439510 SPANXDQ9BXN6 97 aa11.18□□□□□ -0.62
CDC42EP4-202ENST00000439510 SPANXCQ9NY87 97 aa11.18□□□□□ -0.62
CDC42EP4-202ENST00000439510 TRIAP1O43715 76 aa11.18□□□□□ -0.62
CDC42EP4-202ENST00000439510 IGHV1-58A0A0C4DH39 117 aa11.17□□□□□ -0.62
CDC42EP4-202ENST00000439510 NTN5Q8WTR8 489 aaPredicted RBP11.17□□□□□ -0.62
CDC42EP4-202ENST00000439510 RNF183Q96D59 192 aa11.17□□□□□ -0.62
CDC42EP4-202ENST00000439510 TRBV10-2A0A0K0K1G8 114 aa11.17□□□□□ -0.62
CDC42EP4-202ENST00000439510 C10orf99Q6UWK7 81 aa11.16□□□□□ -0.62
CDC42EP4-202ENST00000439510 TEX29Q8N6K0 151 aa11.16□□□□□ -0.62
CDC42EP4-202ENST00000439510 FLNAP21333 2647 aaKnown RBP11.16□□□□□ -0.62
CDC42EP4-202ENST00000439510 ADARB2-AS1A8MUL3 147 aa11.16□□□□□ -0.62
CDC42EP4-202ENST00000439510 AVPP01185 164 aa11.16□□□□□ -0.62
CDC42EP4-202ENST00000439510 TRAV8-3A0A0A6YYJ7 113 aa11.15□□□□□ -0.62
CDC42EP4-202ENST00000439510 RBMY1A1P0DJD3 496 aaKnown RBP11.15□□□□□ -0.62
CDC42EP4-202ENST00000439510 RBMY1CP0DJD4 496 aa11.15□□□□□ -0.62
CDC42EP4-202ENST00000439510 RBMY1FQ15415 496 aaKnown RBP11.15□□□□□ -0.62
CDC42EP4-202ENST00000439510 AKAP9Q99996 3911 aa11.15□□□□□ -0.62
CDC42EP4-202ENST00000439510 ADAMTSL4-AS1Q5T5F5 129 aa11.15□□□□□ -0.62
CDC42EP4-202ENST00000439510 ANAPC13Q9BS18 74 aa11.15□□□□□ -0.62
CDC42EP4-202ENST00000439510 NACAE9PAV3 2078 aa11.15□□□□□ -0.63
CDC42EP4-202ENST00000439510 TINCRA0A1B0GVN0 87 aa11.14□□□□□ -0.63
CDC42EP4-202ENST00000439510 VSIG2Q96IQ7 327 aa11.14□□□□□ -0.63
CDC42EP4-202ENST00000439510 NDUFA12Q9UI09 145 aa11.14□□□□□ -0.63
CDC42EP4-202ENST00000439510 ACANP16112 2415 aa11.14□□□□□ -0.63
CDC42EP4-202ENST00000439510 MIAQ16674 131 aa11.14□□□□□ -0.63
CDC42EP4-202ENST00000439510 ICOSQ9Y6W8 199 aa11.14□□□□□ -0.63
CDC42EP4-202ENST00000439510 SYNJ2BPP57105 145 aa11.14□□□□□ -0.63
CDC42EP4-202ENST00000439510 CEMP1Q6PRD7 247 aaPredicted RBP11.14□□□□□ -0.63
CDC42EP4-202ENST00000439510 PPDPFQ9H3Y8 114 aa11.14□□□□□ -0.63
CDC42EP4-202ENST00000439510 PROK1P58294 105 aa11.13□□□□□ -0.63
CDC42EP4-202ENST00000439510 SPANXA1Q9NS26 97 aa11.13□□□□□ -0.63
CDC42EP4-202ENST00000439510 BEX4Q9NWD9 120 aaPredicted RBP11.13□□□□□ -0.63
CDC42EP4-202ENST00000439510 TEX49A0A1B0GTD5 131 aa11.13□□□□□ -0.63
CDC42EP4-202ENST00000439510 IGHV4-59P01825 116 aa11.13□□□□□ -0.63
CDC42EP4-202ENST00000439510 PRSS2P07478 247 aa11.13□□□□□ -0.63
CDC42EP4-202ENST00000439510 IGHV3-73A0A0B4J1V6 119 aa11.12□□□□□ -0.63
CDC42EP4-202ENST00000439510 PIK3CD-AS1Q5SR53 167 aa11.12□□□□□ -0.63
CDC42EP4-202ENST00000439510 CHCHD7Q9BUK0 85 aa11.12□□□□□ -0.63
CDC42EP4-202ENST00000439510 C5orf47Q569G3 176 aa11.12□□□□□ -0.63
CDC42EP4-202ENST00000439510 UBE2D4Q9Y2X8 147 aa11.12□□□□□ -0.63
CDC42EP4-202ENST00000439510 MXRA5Q9NR99 2828 aa11.12□□□□□ -0.63
CDC42EP4-202ENST00000439510 SONP18583 2426 aaKnown RBP11.12□□□□□ -0.63
CDC42EP4-202ENST00000439510 MYO9AB2RTY4 2548 aa11.11□□□□□ -0.63
CDC42EP4-202ENST00000439510 A8MTW9 85 aa11.11□□□□□ -0.63
CDC42EP4-202ENST00000439510 B4DSR2 109 aa11.11□□□□□ -0.63
CDC42EP4-202ENST00000439510 SNCGO76070 127 aa11.11□□□□□ -0.63
CDC42EP4-202ENST00000439510 VPREB3Q9UKI3 123 aa11.11□□□□□ -0.63
CDC42EP4-202ENST00000439510 CR1P17927 2039 aa11.11□□□□□ -0.63
CDC42EP4-202ENST00000439510 FLNBO75369 2602 aaKnown RBP11.11□□□□□ -0.63
CDC42EP4-202ENST00000439510 H3BMM0 161 aa11.11□□□□□ -0.63
CDC42EP4-202ENST00000439510 DEFB113Q30KQ7 82 aa11.11□□□□□ -0.63
CDC42EP4-202ENST00000439510 RNASE13Q5GAN3 156 aaKnown RBP11.11□□□□□ -0.63
CDC42EP4-202ENST00000439510 UBE2WQ96B02 151 aa11.11□□□□□ -0.63
CDC42EP4-202ENST00000439510 TRAV4A0A0B4J268 109 aa11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 H7C423 109 aa11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 TIMM17BO60830 172 aa11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 H3BT86 120 aa11.1□□□□□ -0.63
CDC42EP4-202ENST00000439510 CRLF1O75462 422 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms