RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 IGHV4OR15-8A0A075B7B6 117 aa6.39□□□□□ -1.39
HPS4-206ENST00000439453 A0A087WW49 117 aa6.39□□□□□ -1.39
HPS4-206ENST00000439453 ELANEP08246 267 aa6.39□□□□□ -1.39
HPS4-206ENST00000439453 RNASE3P12724 160 aaKnown RBP6.39□□□□□ -1.39
HPS4-206ENST00000439453 RNASE4P34096 147 aaKnown RBP6.39□□□□□ -1.39
HPS4-206ENST00000439453 POLR2KP53803 58 aaKnown RBP6.39□□□□□ -1.39
HPS4-206ENST00000439453 LINC00315P59091 139 aa6.39□□□□□ -1.39
HPS4-206ENST00000439453 ODF3Q96PU9 254 aa6.39□□□□□ -1.39
HPS4-206ENST00000439453 MUSTN1Q8IVN3 82 aa6.39□□□□□ -1.39
HPS4-206ENST00000439453 C15orf53Q8NAA6 179 aa6.39□□□□□ -1.39
HPS4-206ENST00000439453 KIF25-AS1Q9Y6Z4 181 aa6.39□□□□□ -1.39
HPS4-206ENST00000439453 MUC4Q99102 2169 aa6.39□□□□□ -1.39
HPS4-206ENST00000439453 TEX49A0A1B0GTD5 131 aa6.39□□□□□ -1.39
HPS4-206ENST00000439453 G3V318 75 aa6.39□□□□□ -1.39
HPS4-206ENST00000439453 VCYO14598 125 aa6.39□□□□□ -1.39
HPS4-206ENST00000439453 DEFB1P60022 68 aa6.39□□□□□ -1.39
HPS4-206ENST00000439453 FAM110AQ9BQ89 295 aa6.39□□□□□ -1.39
HPS4-206ENST00000439453 IGHV3-64A0A075B6Q5 118 aa6.38□□□□□ -1.39
HPS4-206ENST00000439453 OVOL1O14753 267 aa6.38□□□□□ -1.39
HPS4-206ENST00000439453 LEPROTO15243 131 aa6.38□□□□□ -1.39
HPS4-206ENST00000439453 MEIG1Q5JSS6 88 aa6.38□□□□□ -1.39
HPS4-206ENST00000439453 MINOS1Q5TGZ0 78 aa6.38□□□□□ -1.39
HPS4-206ENST00000439453 LINC01600Q96MT4 127 aa6.38□□□□□ -1.39
HPS4-206ENST00000439453 MINOS1-NBL1R4GNA1 71 aa6.38□□□□□ -1.39
HPS4-206ENST00000439453 TRBV7-1A0A0A6YYK4 115 aa6.38□□□□□ -1.39
HPS4-206ENST00000439453 FAM74A4Q5TZK3 123 aa6.38□□□□□ -1.39
HPS4-206ENST00000439453 SUMO4Q6EEV6 95 aa6.38□□□□□ -1.39
HPS4-206ENST00000439453 TRBV10-2A0A0K0K1G8 114 aa6.38□□□□□ -1.39
HPS4-206ENST00000439453 NXPH4O95158 308 aa6.38□□□□□ -1.39
HPS4-206ENST00000439453 FAM159AQ6UWV7 190 aa6.38□□□□□ -1.39
HPS4-206ENST00000439453 C3orf56Q8N813 242 aa6.38□□□□□ -1.39
HPS4-206ENST00000439453 SIRPDQ9H106 197 aa6.38□□□□□ -1.39
HPS4-206ENST00000439453 JMJD1CQ15652 2540 aa6.37□□□□□ -1.39
HPS4-206ENST00000439453 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.37□□□□□ -1.39
HPS4-206ENST00000439453 TMEM223A0PJW6 202 aa6.37□□□□□ -1.39
HPS4-206ENST00000439453 C2orf82Q6UX34 121 aa6.37□□□□□ -1.39
HPS4-206ENST00000439453 H3BMM0 161 aa6.37□□□□□ -1.39
HPS4-206ENST00000439453 ZNF56Q15929 161 aa6.37□□□□□ -1.39
HPS4-206ENST00000439453 SHISA2Q6UWI4 295 aa6.37□□□□□ -1.39
HPS4-206ENST00000439453 UBE2WQ96B02 151 aa6.37□□□□□ -1.39
HPS4-206ENST00000439453 JPT2Q9H910 190 aa6.37□□□□□ -1.39
HPS4-206ENST00000439453 TRAV12-3A0A0B4J271 114 aa6.37□□□□□ -1.39
HPS4-206ENST00000439453 SDHAF1A6NFY7 115 aa6.37□□□□□ -1.39
HPS4-206ENST00000439453 J3QLI3 93 aa6.36□□□□□ -1.39
HPS4-206ENST00000439453 FAM19A4Q96LR4 140 aa6.36□□□□□ -1.39
HPS4-206ENST00000439453 TRBV30A0A0K0K1B3 111 aa6.36□□□□□ -1.39
HPS4-206ENST00000439453 LGALS9O00182 355 aa6.36□□□□□ -1.39
HPS4-206ENST00000439453 OPRPNQ99935 248 aaPredicted RBP6.36□□□□□ -1.39
HPS4-206ENST00000439453 A0A087WWL8 130 aa6.36□□□□□ -1.39
HPS4-206ENST00000439453 M0R2P5 195 aa6.36□□□□□ -1.39
HPS4-206ENST00000439453 TRIAP1O43715 76 aa6.36□□□□□ -1.39
HPS4-206ENST00000439453 F6UB75 175 aa6.35□□□□□ -1.39
HPS4-206ENST00000439453 SOCS3O14543 225 aa6.35□□□□□ -1.39
HPS4-206ENST00000439453 IGHV4-38-2P0DP08 117 aa6.35□□□□□ -1.39
HPS4-206ENST00000439453 DGAT2L7PQ6IED9 249 aa6.35□□□□□ -1.39
HPS4-206ENST00000439453 APRG1Q8IVJ8 170 aa6.35□□□□□ -1.39
HPS4-206ENST00000439453 C2CD3Q4AC94 2353 aa6.35□□□□□ -1.39
HPS4-206ENST00000439453 TRBV27A0A0K0K1C4 114 aa6.35□□□□□ -1.39
HPS4-206ENST00000439453 IGHV1-69P01742 117 aa6.35□□□□□ -1.39
HPS4-206ENST00000439453 HTN1P15515 57 aa6.35□□□□□ -1.39
HPS4-206ENST00000439453 C9orf153Q5TBE3 101 aa6.35□□□□□ -1.39
HPS4-206ENST00000439453 ZNF22P17026 224 aaPredicted RBP6.35□□□□□ -1.39
HPS4-206ENST00000439453 SPANXA1Q9NS26 97 aa6.35□□□□□ -1.39
HPS4-206ENST00000439453 TENM1Q9UKZ4 2725 aa6.35□□□□□ -1.39
HPS4-206ENST00000439453 A0A0J9YX75 114 aa6.34□□□□□ -1.39
HPS4-206ENST00000439453 A0A0J9YXY3 114 aa6.34□□□□□ -1.39
HPS4-206ENST00000439453 TRBV6-5A0A0K0K1A5 114 aa6.34□□□□□ -1.39
HPS4-206ENST00000439453 H7C423 109 aa6.34□□□□□ -1.39
HPS4-206ENST00000439453 MRPL23Q16540 153 aaKnown RBP6.34□□□□□ -1.39
HPS4-206ENST00000439453 UNQ9165/PRO28630Q6UXU0 137 aa6.34□□□□□ -1.39
HPS4-206ENST00000439453 MDFICQ9P1T7 246 aa6.34□□□□□ -1.39
HPS4-206ENST00000439453 NPC2P61916 151 aa6.33□□□□□ -1.4
HPS4-206ENST00000439453 ESM1Q9NQ30 184 aa6.33□□□□□ -1.4
HPS4-206ENST00000439453 KRTAP21-3Q3LHN1 58 aa6.33□□□□□ -1.4
HPS4-206ENST00000439453 ZNF580Q9UK33 172 aa6.33□□□□□ -1.4
HPS4-206ENST00000439453 ICOSQ9Y6W8 199 aa6.33□□□□□ -1.4
HPS4-206ENST00000439453 A0A0J9YXV3 536 aa6.33□□□□□ -1.4
HPS4-206ENST00000439453 RHOHQ15669 191 aa6.33□□□□□ -1.4
HPS4-206ENST00000439453 NSUN5P1Q3KNT7 163 aa6.33□□□□□ -1.4
HPS4-206ENST00000439453 H3BT86 120 aa6.32□□□□□ -1.4
HPS4-206ENST00000439453 UBE2E1P51965 193 aa6.32□□□□□ -1.4
HPS4-206ENST00000439453 ADARB2-AS1A8MUL3 147 aa6.32□□□□□ -1.4
HPS4-206ENST00000439453 TMEM101Q96IK0 257 aa6.32□□□□□ -1.4
HPS4-206ENST00000439453 IGHV3OR16-10A0A075B7F0 116 aa6.32□□□□□ -1.4
HPS4-206ENST00000439453 TRAV8-3A0A0A6YYJ7 113 aa6.32□□□□□ -1.4
HPS4-206ENST00000439453 TRBV12-3P01733 135 aa6.32□□□□□ -1.4
HPS4-206ENST00000439453 LITAFQ99732 161 aa6.32□□□□□ -1.4
HPS4-206ENST00000439453 EDA2RQ9HAV5 297 aa6.32□□□□□ -1.4
HPS4-206ENST00000439453 FAM223BA6NKX1 122 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 FAM223AQ8IWN6 122 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 KLLNB2CW77 178 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 IGHV3-30-3P0DP02 117 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 C20orf203Q8NBC4 194 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 DUX3Q96PT4 197 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 CHCHD5Q9BSY4 110 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 LINC00527Q9UJ94 153 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 TRRAPQ9Y4A5 3859 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 TRAV41A0A0B4J266 112 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 FAM240AA0A1B0GVK7 77 aa6.31□□□□□ -1.4
HPS4-206ENST00000439453 M0QY20 66 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms