RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 GATD1Q8NB37 220 aa8.67□□□□□ -1.02
TRAPPC9-202ENST00000438773 TIMM21Q9BVV7 248 aa8.67□□□□□ -1.02
TRAPPC9-202ENST00000438773 GAS8-AS1O95177 125 aa8.67□□□□□ -1.02
TRAPPC9-202ENST00000438773 MED14OSP0DP75 135 aa8.67□□□□□ -1.02
TRAPPC9-202ENST00000438773 C9orf66Q5T8R8 295 aa8.67□□□□□ -1.02
TRAPPC9-202ENST00000438773 RNF152Q8N8N0 203 aa8.67□□□□□ -1.02
TRAPPC9-202ENST00000438773 TMEM141Q96I45 108 aa8.66□□□□□ -1.02
TRAPPC9-202ENST00000438773 TRAV26-1A0A087WT03 109 aa8.66□□□□□ -1.02
TRAPPC9-202ENST00000438773 H3BMM0 161 aa8.66□□□□□ -1.02
TRAPPC9-202ENST00000438773 APOC4P55056 127 aa8.66□□□□□ -1.02
TRAPPC9-202ENST00000438773 BOD1L2Q8IYS8 172 aa8.66□□□□□ -1.02
TRAPPC9-202ENST00000438773 SLC25A20O43772 301 aa8.66□□□□□ -1.02
TRAPPC9-202ENST00000438773 DAD1P61803 113 aa8.66□□□□□ -1.02
TRAPPC9-202ENST00000438773 EDN2P20800 178 aa8.66□□□□□ -1.02
TRAPPC9-202ENST00000438773 HIST1H4AP62805 103 aaKnown RBP8.66□□□□□ -1.02
TRAPPC9-202ENST00000438773 DAND5Q8N907 189 aa8.66□□□□□ -1.02
TRAPPC9-202ENST00000438773 PPDPFLQ8WWR9 84 aa8.66□□□□□ -1.02
TRAPPC9-202ENST00000438773 OPRPNQ99935 248 aaPredicted RBP8.66□□□□□ -1.02
TRAPPC9-202ENST00000438773 UFSP1Q6NVU6 142 aa8.65□□□□□ -1.02
TRAPPC9-202ENST00000438773 UBE2DNLQ8IWF7 75 aa8.65□□□□□ -1.02
TRAPPC9-202ENST00000438773 PLEKHB2Q96CS7 222 aa8.65□□□□□ -1.02
TRAPPC9-202ENST00000438773 PRO1854Q9UHT4 67 aa8.65□□□□□ -1.02
TRAPPC9-202ENST00000438773 CRLF1O75462 422 aa8.65□□□□□ -1.02
TRAPPC9-202ENST00000438773 PRIMA1Q86XR5 153 aa8.65□□□□□ -1.02
TRAPPC9-202ENST00000438773 COPS9Q8WXC6 57 aa8.65□□□□□ -1.02
TRAPPC9-202ENST00000438773 C11orf21Q9P2W6 132 aa8.65□□□□□ -1.02
TRAPPC9-202ENST00000438773 F5H768 121 aa8.65□□□□□ -1.03
TRAPPC9-202ENST00000438773 J3QQQ9 107 aa8.65□□□□□ -1.03
TRAPPC9-202ENST00000438773 EDA2RQ9HAV5 297 aa8.65□□□□□ -1.03
TRAPPC9-202ENST00000438773 PAX4O43316 350 aa8.64□□□□□ -1.03
TRAPPC9-202ENST00000438773 ATXN8Q156A1 80 aa8.64□□□□□ -1.03
TRAPPC9-202ENST00000438773 GAGE2AQ6NT46 116 aa8.64□□□□□ -1.03
TRAPPC9-202ENST00000438773 ODF1Q14990 250 aa8.64□□□□□ -1.03
TRAPPC9-202ENST00000438773 PRR9Q5T870 116 aa8.64□□□□□ -1.03
TRAPPC9-202ENST00000438773 USP24Q9UPU5 2620 aa8.64□□□□□ -1.03
TRAPPC9-202ENST00000438773 G3V4G9 280 aa8.63□□□□□ -1.03
TRAPPC9-202ENST00000438773 DCANP1Q8TF63 244 aa8.63□□□□□ -1.03
TRAPPC9-202ENST00000438773 ODF3Q96PU9 254 aa8.63□□□□□ -1.03
TRAPPC9-202ENST00000438773 A0A0J9YXV3 536 aa8.63□□□□□ -1.03
TRAPPC9-202ENST00000438773 HILS1P60008 231 aa8.63□□□□□ -1.03
TRAPPC9-202ENST00000438773 RHOHQ15669 191 aa8.63□□□□□ -1.03
TRAPPC9-202ENST00000438773 ZFP2Q6ZN57 461 aa8.63□□□□□ -1.03
TRAPPC9-202ENST00000438773 MALP21145 153 aa8.62□□□□□ -1.03
TRAPPC9-202ENST00000438773 Q6ZQT7 251 aa8.62□□□□□ -1.03
TRAPPC9-202ENST00000438773 TMEM243Q9BU79 118 aa8.62□□□□□ -1.03
TRAPPC9-202ENST00000438773 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC9-202ENST00000438773 A4D1N5 150 aa8.62□□□□□ -1.03
TRAPPC9-202ENST00000438773 PFN2P35080 140 aa8.62□□□□□ -1.03
TRAPPC9-202ENST00000438773 MORN3Q6PF18 240 aaPredicted RBP8.62□□□□□ -1.03
TRAPPC9-202ENST00000438773 NDUFA12Q9UI09 145 aa8.62□□□□□ -1.03
TRAPPC9-202ENST00000438773 SMIM20Q8N5G0 67 aa8.62□□□□□ -1.03
TRAPPC9-202ENST00000438773 MAPKAPK5-AS1Q8N8E1 139 aa8.62□□□□□ -1.03
TRAPPC9-202ENST00000438773 C15orf53Q8NAA6 179 aa8.62□□□□□ -1.03
TRAPPC9-202ENST00000438773 CFAP161Q6P656 301 aa8.61□□□□□ -1.03
TRAPPC9-202ENST00000438773 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC9-202ENST00000438773 A0A096LPF7 62 aa8.61□□□□□ -1.03
TRAPPC9-202ENST00000438773 IGKV2-29A2NJV5 120 aaPredicted RBP8.61□□□□□ -1.03
TRAPPC9-202ENST00000438773 GAGE6Q13070 117 aa8.61□□□□□ -1.03
TRAPPC9-202ENST00000438773 SIVA1O15304 175 aa8.61□□□□□ -1.03
TRAPPC9-202ENST00000438773 BRI3O95415 125 aa8.6□□□□□ -1.03
TRAPPC9-202ENST00000438773 INSL3P51460 131 aa8.6□□□□□ -1.03
TRAPPC9-202ENST00000438773 C16orf74Q96GX8 76 aa8.6□□□□□ -1.03
TRAPPC9-202ENST00000438773 FLNAP21333 2647 aaKnown RBP8.6□□□□□ -1.03
TRAPPC9-202ENST00000438773 NDUFA11Q86Y39 141 aa8.6□□□□□ -1.03
TRAPPC9-202ENST00000438773 RASL10AQ92737 203 aa8.6□□□□□ -1.03
TRAPPC9-202ENST00000438773 UBE2WQ96B02 151 aa8.6□□□□□ -1.03
TRAPPC9-202ENST00000438773 CRPP02741 224 aa8.59□□□□□ -1.03
TRAPPC9-202ENST00000438773 C11orf86A6NJI1 115 aa8.59□□□□□ -1.03
TRAPPC9-202ENST00000438773 CRYBA4P53673 196 aa8.59□□□□□ -1.03
TRAPPC9-202ENST00000438773 CARD19Q96LW7 228 aa8.59□□□□□ -1.03
TRAPPC9-202ENST00000438773 KLLNB2CW77 178 aa8.59□□□□□ -1.03
TRAPPC9-202ENST00000438773 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.59□□□□□ -1.03
TRAPPC9-202ENST00000438773 ITPR3Q14573 2671 aa8.59□□□□□ -1.03
TRAPPC9-202ENST00000438773 ZFHX3Q15911 3703 aa8.58□□□□□ -1.04
TRAPPC9-202ENST00000438773 NXPH4O95158 308 aa8.58□□□□□ -1.04
TRAPPC9-202ENST00000438773 CEMP1Q6PRD7 247 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC9-202ENST00000438773 RNF185Q96GF1 192 aa8.58□□□□□ -1.04
TRAPPC9-202ENST00000438773 ZNF580Q9UK33 172 aa8.58□□□□□ -1.04
TRAPPC9-202ENST00000438773 ATRQ13535 2644 aa8.58□□□□□ -1.04
TRAPPC9-202ENST00000438773 A0A0J9YY99 117 aa8.58□□□□□ -1.04
TRAPPC9-202ENST00000438773 RNASE3P12724 160 aaKnown RBP8.58□□□□□ -1.04
TRAPPC9-202ENST00000438773 DEFB135Q30KP9 77 aa8.58□□□□□ -1.04
TRAPPC9-202ENST00000438773 SETXQ7Z333 2677 aaKnown RBP8.58□□□□□ -1.04
TRAPPC9-202ENST00000438773 MT-ATP8P03928 68 aa8.58□□□□□ -1.04
TRAPPC9-202ENST00000438773 CFC1BP0CG36 223 aa8.58□□□□□ -1.04
TRAPPC9-202ENST00000438773 CFC1P0CG37 223 aa8.58□□□□□ -1.04
TRAPPC9-202ENST00000438773 MUSTN1Q8IVN3 82 aa8.58□□□□□ -1.04
TRAPPC9-202ENST00000438773 C6orf226Q5I0X4 101 aa8.57□□□□□ -1.04
TRAPPC9-202ENST00000438773 U3KQK5 164 aa8.57□□□□□ -1.04
TRAPPC9-202ENST00000438773 IGSF10Q6WRI0 2623 aa8.57□□□□□ -1.04
TRAPPC9-202ENST00000438773 BAHCC1Q9P281 2608 aa8.57□□□□□ -1.04
TRAPPC9-202ENST00000438773 TINCRA0A1B0GVN0 87 aa8.57□□□□□ -1.04
TRAPPC9-202ENST00000438773 C9orf153Q5TBE3 101 aa8.57□□□□□ -1.04
TRAPPC9-202ENST00000438773 TMEM263Q8WUH6 116 aaKnown RBP8.57□□□□□ -1.04
TRAPPC9-202ENST00000438773 ANKRD29Q8N6D5 301 aa8.57□□□□□ -1.04
TRAPPC9-202ENST00000438773 MAST4O15021 2626 aa8.57□□□□□ -1.04
TRAPPC9-202ENST00000438773 P0DMU3 169 aa8.57□□□□□ -1.04
TRAPPC9-202ENST00000438773 FAM231AP0DMU4 169 aa8.57□□□□□ -1.04
TRAPPC9-202ENST00000438773 FAM231CP0DMU5 169 aa8.57□□□□□ -1.04
TRAPPC9-202ENST00000438773 FOXI1Q12951 378 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 383.4 ms