RNA–Protein interactions for RNA: ENST00000438413.5

MUC1-211, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best) BASIC

Gene MUC1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-211ENST00000438413 CFAP161Q6P656 301 aa12.05□□□□□ -0.48
MUC1-211ENST00000438413 C11orf52Q96A22 123 aa12.05□□□□□ -0.48
MUC1-211ENST00000438413 RPS10P46783 165 aaKnown RBP12.04□□□□□ -0.48
MUC1-211ENST00000438413 COTL1Q14019 142 aa12.04□□□□□ -0.48
MUC1-211ENST00000438413 GTSF1Q8WW33 167 aa12.04□□□□□ -0.48
MUC1-211ENST00000438413 IGKV2-24A0A0C4DH68 120 aa12.03□□□□□ -0.48
MUC1-211ENST00000438413 IGKV3OR2-268A0A0C4DH90 116 aa12.03□□□□□ -0.48
MUC1-211ENST00000438413 C19orf71A6NCJ1 209 aa12.03□□□□□ -0.48
MUC1-211ENST00000438413 F2Z2F3 143 aa12.03□□□□□ -0.48
MUC1-211ENST00000438413 NDUFS6O75380 124 aaKnown RBP12.03□□□□□ -0.48
MUC1-211ENST00000438413 MAJINQ3KP22 176 aa12.03□□□□□ -0.48
MUC1-211ENST00000438413 HIGD2BQ4VC39 106 aa12.03□□□□□ -0.48
MUC1-211ENST00000438413 PRSS3P2Q8NHM4 247 aa12.03□□□□□ -0.48
MUC1-211ENST00000438413 LINC01600Q96MT4 127 aa12.03□□□□□ -0.48
MUC1-211ENST00000438413 MANBALQ9NQG1 85 aa12.03□□□□□ -0.48
MUC1-211ENST00000438413 XKRY2A2RUG3 117 aa12.02□□□□□ -0.49
MUC1-211ENST00000438413 PRR3P79522 188 aaKnown RBP12.02□□□□□ -0.49
MUC1-211ENST00000438413 LYZL1Q6UWQ5 148 aa12.02□□□□□ -0.49
MUC1-211ENST00000438413 BATF3Q9NR55 127 aa12.02□□□□□ -0.49
MUC1-211ENST00000438413 GNG13Q9P2W3 67 aa12.02□□□□□ -0.49
MUC1-211ENST00000438413 NTF3P20783 257 aa12.01□□□□□ -0.49
MUC1-211ENST00000438413 KANTRA0A1W2PQU2 76 aa12□□□□□ -0.49
MUC1-211ENST00000438413 BCL2L11O43521 198 aa12□□□□□ -0.49
MUC1-211ENST00000438413 IFNA1P01562 189 aa12□□□□□ -0.49
MUC1-211ENST00000438413 GNG4P50150 75 aa12□□□□□ -0.49
MUC1-211ENST00000438413 CCL20P78556 96 aa12□□□□□ -0.49
MUC1-211ENST00000438413 STPG4Q8N801 248 aa12□□□□□ -0.49
MUC1-211ENST00000438413 SMIM12Q96EX1 92 aa12□□□□□ -0.49
MUC1-211ENST00000438413 RAB19A4D1S5 217 aa11.99□□□□□ -0.49
MUC1-211ENST00000438413 ODF1Q14990 250 aa11.99□□□□□ -0.49
MUC1-211ENST00000438413 LYPD6BQ8NI32 183 aa11.99□□□□□ -0.49
MUC1-211ENST00000438413 GVQW2A0A096LPI5 108 aaPredicted RBP11.98□□□□□ -0.49
MUC1-211ENST00000438413 HMSDA8MTL9 139 aa11.98□□□□□ -0.49
MUC1-211ENST00000438413 AMMECR1LQ6DCA0 310 aa11.98□□□□□ -0.49
MUC1-211ENST00000438413 CHCHD10Q8WYQ3 142 aaPredicted RBP11.98□□□□□ -0.49
MUC1-211ENST00000438413 A0A096LNI7 61 aa11.97□□□□□ -0.49
MUC1-211ENST00000438413 EIF5AP63241 154 aaKnown RBP11.97□□□□□ -0.49
MUC1-211ENST00000438413 TRAV26-2A0A0B4J265 109 aa11.96□□□□□ -0.49
MUC1-211ENST00000438413 CTRLP40313 264 aa11.96□□□□□ -0.49
MUC1-211ENST00000438413 RGS21Q2M5E4 152 aa11.96□□□□□ -0.49
MUC1-211ENST00000438413 RNASEKQ6P5S7 137 aaKnown RBP11.96□□□□□ -0.49
MUC1-211ENST00000438413 C9orf62Q8N4C0 152 aa11.96□□□□□ -0.49
MUC1-211ENST00000438413 GATD1Q8NB37 220 aa11.96□□□□□ -0.49
MUC1-211ENST00000438413 RNF213Q63HN8 5207 aa11.95□□□□□ -0.5
MUC1-211ENST00000438413 TRBV20OR9-2A0A075B6H5 130 aa11.95□□□□□ -0.5
MUC1-211ENST00000438413 TRAV1-1A0A0B4J248 108 aa11.95□□□□□ -0.5
MUC1-211ENST00000438413 A0A0J9YXV3 536 aa11.95□□□□□ -0.5
MUC1-211ENST00000438413 TWIST1Q15672 202 aa11.95□□□□□ -0.5
MUC1-211ENST00000438413 Q6ZNX1 250 aa11.95□□□□□ -0.5
MUC1-211ENST00000438413 BIN3Q9NQY0 253 aa11.95□□□□□ -0.5
MUC1-211ENST00000438413 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.94□□□□□ -0.5
MUC1-211ENST00000438413 IGKV2-29A2NJV5 120 aaPredicted RBP11.94□□□□□ -0.5
MUC1-211ENST00000438413 TEX46H3BTG2 121 aa11.93□□□□□ -0.5
MUC1-211ENST00000438413 H7C423 109 aa11.93□□□□□ -0.5
MUC1-211ENST00000438413 PDE6DO43924 150 aa11.93□□□□□ -0.5
MUC1-211ENST00000438413 NCR2O95944 276 aa11.93□□□□□ -0.5
MUC1-211ENST00000438413 MEF2BQ02080 365 aaPredicted RBP11.93□□□□□ -0.5
MUC1-211ENST00000438413 FOXI1Q12951 378 aa11.93□□□□□ -0.5
MUC1-211ENST00000438413 NUDT10Q8NFP7 164 aa11.93□□□□□ -0.5
MUC1-211ENST00000438413 RPL39LQ96EH5 51 aaKnown RBP11.93□□□□□ -0.5
MUC1-211ENST00000438413 NUDT11Q96G61 164 aa11.93□□□□□ -0.5
MUC1-211ENST00000438413 CNFNQ9BYD5 112 aa11.93□□□□□ -0.5
MUC1-211ENST00000438413 MED9Q9NWA0 146 aa11.93□□□□□ -0.5
MUC1-211ENST00000438413 APCSP02743 223 aa11.92□□□□□ -0.5
MUC1-211ENST00000438413 FGF6P10767 208 aa11.92□□□□□ -0.5
MUC1-211ENST00000438413 REG3GQ6UW15 175 aa11.92□□□□□ -0.5
MUC1-211ENST00000438413 SPINK6Q6UWN8 80 aa11.92□□□□□ -0.5
MUC1-211ENST00000438413 LINC00474Q9P2X8 69 aa11.92□□□□□ -0.5
MUC1-211ENST00000438413 KRTAP10-8P60410 259 aa11.91□□□□□ -0.5
MUC1-211ENST00000438413 PKIGQ9Y2B9 76 aa11.91□□□□□ -0.5
MUC1-211ENST00000438413 XCL1P47992 114 aa11.9□□□□□ -0.5
MUC1-211ENST00000438413 OR5A1Q8NGJ0 315 aa11.9□□□□□ -0.5
MUC1-211ENST00000438413 SDHAF1A6NFY7 115 aa11.89□□□□□ -0.51
MUC1-211ENST00000438413 ZNF25P17030 456 aaPredicted RBP11.89□□□□□ -0.51
MUC1-211ENST00000438413 LINC00526Q96FQ7 95 aa11.89□□□□□ -0.51
MUC1-211ENST00000438413 CARD19Q96LW7 228 aa11.89□□□□□ -0.51
MUC1-211ENST00000438413 RPP21Q9H633 154 aaKnown RBP11.89□□□□□ -0.51
MUC1-211ENST00000438413 CCL25O15444 150 aa11.88□□□□□ -0.51
MUC1-211ENST00000438413 Q6ZRP5 223 aa11.88□□□□□ -0.51
MUC1-211ENST00000438413 SMIM15Q7Z3B0 74 aa11.88□□□□□ -0.51
MUC1-211ENST00000438413 BTF3L4Q96K17 158 aa11.88□□□□□ -0.51
MUC1-211ENST00000438413 RNASE7Q9H1E1 156 aaKnown RBP11.88□□□□□ -0.51
MUC1-211ENST00000438413 IGHV1-58A0A0C4DH39 117 aa11.87□□□□□ -0.51
MUC1-211ENST00000438413 SRSF9Q13242 221 aaKnown RBP eCLIP11.87□□□□□ -0.51
MUC1-211ENST00000438413 TEX261Q6UWH6 196 aa11.87□□□□□ -0.51
MUC1-211ENST00000438413 LINC00959A0A1B0GUT2 108 aa11.86□□□□□ -0.51
MUC1-211ENST00000438413 BCL2P10415 239 aa11.86□□□□□ -0.51
MUC1-211ENST00000438413 FOXA3P55318 350 aaPredicted RBP11.86□□□□□ -0.51
MUC1-211ENST00000438413 EIF5AL1Q6IS14 154 aaKnown RBP11.86□□□□□ -0.51
MUC1-211ENST00000438413 TMEM101Q96IK0 257 aa11.86□□□□□ -0.51
MUC1-211ENST00000438413 I3L3M4 83 aa11.85□□□□□ -0.51
MUC1-211ENST00000438413 K7EN84 100 aa11.85□□□□□ -0.51
MUC1-211ENST00000438413 PMCHP20382 165 aa11.85□□□□□ -0.51
MUC1-211ENST00000438413 FAM231BA6NCW3 169 aa11.84□□□□□ -0.51
MUC1-211ENST00000438413 ZNF561-AS1K7EIQ3 104 aa11.84□□□□□ -0.51
MUC1-211ENST00000438413 SYCNQ0VAF6 134 aa11.83□□□□□ -0.52
MUC1-211ENST00000438413 SS18Q15532 418 aa11.83□□□□□ -0.52
MUC1-211ENST00000438413 OCC1Q8TAD7 63 aa11.83□□□□□ -0.52
MUC1-211ENST00000438413 TRBV6-5A0A0K0K1A5 114 aa11.82□□□□□ -0.52
MUC1-211ENST00000438413 ESDP10768 282 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms