RNA–Protein interactions for RNA: ENST00000438224.5

HERPUD2-206, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-206ENST00000438224 KRTAP10-1P60331 282 aa5.67□□□□□ -1.5
HERPUD2-206ENST00000438224 RPS20P60866 119 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-206ENST00000438224 RPL36AP83881 106 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-206ENST00000438224 LAGE3Q14657 143 aa5.67□□□□□ -1.5
HERPUD2-206ENST00000438224 NTM-AS1Q6ZSK4 140 aa5.67□□□□□ -1.5
HERPUD2-206ENST00000438224 GTSF1Q8WW33 167 aa5.67□□□□□ -1.5
HERPUD2-206ENST00000438224 RPL36ALQ969Q0 106 aaKnown RBP5.67□□□□□ -1.5
HERPUD2-206ENST00000438224 DNAH5Q8TE73 4624 aa5.67□□□□□ -1.5
HERPUD2-206ENST00000438224 H0Y8G0 127 aa5.66□□□□□ -1.5
HERPUD2-206ENST00000438224 M0QY20 66 aa5.66□□□□□ -1.5
HERPUD2-206ENST00000438224 MGPP08493 103 aa5.66□□□□□ -1.5
HERPUD2-206ENST00000438224 NTF3P20783 257 aa5.66□□□□□ -1.5
HERPUD2-206ENST00000438224 RPP21Q9H633 154 aaKnown RBP5.66□□□□□ -1.5
HERPUD2-206ENST00000438224 APOBP04114 4563 aaKnown RBP5.65□□□□□ -1.5
HERPUD2-206ENST00000438224 TRBV6-8A0A0A6YYG3 113 aa5.65□□□□□ -1.5
HERPUD2-206ENST00000438224 SRP19P09132 144 aaKnown RBP5.65□□□□□ -1.5
HERPUD2-206ENST00000438224 CEBPGP53567 150 aa5.65□□□□□ -1.5
HERPUD2-206ENST00000438224 CACNG7P62955 275 aa5.65□□□□□ -1.5
HERPUD2-206ENST00000438224 HERV-K104P63124 156 aa5.65□□□□□ -1.5
HERPUD2-206ENST00000438224 ERASQ7Z444 233 aa5.65□□□□□ -1.5
HERPUD2-206ENST00000438224 FAM210AQ96ND0 272 aa5.65□□□□□ -1.5
HERPUD2-206ENST00000438224 ALKBH7Q9BT30 221 aaPredicted RBP5.65□□□□□ -1.5
HERPUD2-206ENST00000438224 CNFNQ9BYD5 112 aa5.65□□□□□ -1.5
HERPUD2-206ENST00000438224 KLK12Q9UKR0 248 aa5.65□□□□□ -1.5
HERPUD2-206ENST00000438224 C9JQL5 133 aa5.64□□□□□ -1.51
HERPUD2-206ENST00000438224 F2Z2F3 143 aa5.64□□□□□ -1.51
HERPUD2-206ENST00000438224 LECT2O14960 151 aa5.64□□□□□ -1.51
HERPUD2-206ENST00000438224 PSCAO43653 123 aa5.64□□□□□ -1.51
HERPUD2-206ENST00000438224 FOXA3P55318 350 aaPredicted RBP5.64□□□□□ -1.51
HERPUD2-206ENST00000438224 XGP55808 180 aa5.64□□□□□ -1.51
HERPUD2-206ENST00000438224 MPV17L2Q567V2 206 aa5.64□□□□□ -1.51
HERPUD2-206ENST00000438224 LINC01551Q86U37 167 aa5.64□□□□□ -1.51
HERPUD2-206ENST00000438224 DEFB104AQ8WTQ1 72 aa5.64□□□□□ -1.51
HERPUD2-206ENST00000438224 SMIM7Q9BQ49 75 aa5.64□□□□□ -1.51
HERPUD2-206ENST00000438224 BIN3Q9NQY0 253 aa5.64□□□□□ -1.51
HERPUD2-206ENST00000438224 TRAV8-3A0A0A6YYJ7 113 aa5.63□□□□□ -1.51
HERPUD2-206ENST00000438224 SMIM17P0DL12 118 aa5.63□□□□□ -1.51
HERPUD2-206ENST00000438224 ATRAIDQ6UW56 229 aa5.63□□□□□ -1.51
HERPUD2-206ENST00000438224 ENHOQ6UWT2 76 aa5.63□□□□□ -1.51
HERPUD2-206ENST00000438224 FAM231DQ6ZW35 169 aa5.63□□□□□ -1.51
HERPUD2-206ENST00000438224 Q8N814 137 aa5.63□□□□□ -1.51
HERPUD2-206ENST00000438224 Q8N976 141 aa5.63□□□□□ -1.51
HERPUD2-206ENST00000438224 EIF5A2Q9GZV4 153 aaKnown RBP5.63□□□□□ -1.51
HERPUD2-206ENST00000438224 DPH3P1Q9H4G8 78 aa5.63□□□□□ -1.51
HERPUD2-206ENST00000438224 TRAV26-2A0A0B4J265 109 aa5.62□□□□□ -1.51
HERPUD2-206ENST00000438224 GATCO43716 136 aaKnown RBP5.62□□□□□ -1.51
HERPUD2-206ENST00000438224 NDUFS6O75380 124 aaKnown RBP5.62□□□□□ -1.51
HERPUD2-206ENST00000438224 TRGC1P0CF51 173 aa5.62□□□□□ -1.51
HERPUD2-206ENST00000438224 HAMPP81172 84 aa5.62□□□□□ -1.51
HERPUD2-206ENST00000438224 RASL11AQ6T310 242 aa5.62□□□□□ -1.51
HERPUD2-206ENST00000438224 Q8N1X5 172 aa5.62□□□□□ -1.51
HERPUD2-206ENST00000438224 GATD1Q8NB37 220 aa5.62□□□□□ -1.51
HERPUD2-206ENST00000438224 BAALCQ8WXS3 180 aa5.62□□□□□ -1.51
HERPUD2-206ENST00000438224 UBE2WQ96B02 151 aa5.62□□□□□ -1.51
HERPUD2-206ENST00000438224 PGLYRP4Q96LB8 373 aa5.62□□□□□ -1.51
HERPUD2-206ENST00000438224 CHCHD5Q9BSY4 110 aa5.62□□□□□ -1.51
HERPUD2-206ENST00000438224 CHCHD7Q9BUK0 85 aa5.62□□□□□ -1.51
HERPUD2-206ENST00000438224 URGCP-MRPS24S4R325 110 aa5.62□□□□□ -1.51
HERPUD2-206ENST00000438224 FLG2Q5D862 2391 aaPredicted RBP5.62□□□□□ -1.51
HERPUD2-206ENST00000438224 IGKV2D-24A0A075B6R9 120 aa5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 A0A087WX48 190 aa5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 IGLV5-52A0A0A0MRZ9 124 aa5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 ZNF727A8MUV8 499 aa5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 A8MWL6 223 aa5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 GAS8-AS1O95177 125 aa5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 RBX1P62877 108 aa5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 GAGE6Q13070 117 aa5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 TWIST1Q15672 202 aa5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 IQCJQ1A5X6 159 aa5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 KRTAP26-1Q6PEX3 210 aa5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 TEX261Q6UWH6 196 aa5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 C15orf54Q8N8G6 183 aa5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 RPL39LQ96EH5 51 aaKnown RBP5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 GFRA4Q9GZZ7 299 aa5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 SRRM2Q9UQ35 2752 aaKnown RBP5.61□□□□□ -1.51
HERPUD2-206ENST00000438224 TMEM262E9PQX1 116 aa5.6□□□□□ -1.51
HERPUD2-206ENST00000438224 H7C1H1 209 aa5.6□□□□□ -1.51
HERPUD2-206ENST00000438224 LINC01620Q4KN68 170 aa5.6□□□□□ -1.51
HERPUD2-206ENST00000438224 CLPSL2Q6UWE3 100 aa5.6□□□□□ -1.51
HERPUD2-206ENST00000438224 NTN5Q8WTR8 489 aaPredicted RBP5.6□□□□□ -1.51
HERPUD2-206ENST00000438224 NIT2Q9NQR4 276 aa5.6□□□□□ -1.51
HERPUD2-206ENST00000438224 OSTCQ9NRP0 149 aa5.6□□□□□ -1.51
HERPUD2-206ENST00000438224 V9GYV3 84 aa5.6□□□□□ -1.51
HERPUD2-206ENST00000438224 IGLV4-60A0A075B6I1 120 aa5.59□□□□□ -1.51
HERPUD2-206ENST00000438224 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.59□□□□□ -1.51
HERPUD2-206ENST00000438224 TRBV25-1A0A075B6N4 114 aa5.59□□□□□ -1.51
HERPUD2-206ENST00000438224 IGHV1-24A0A0C4DH33 117 aa5.59□□□□□ -1.51
HERPUD2-206ENST00000438224 HIGD1CA8MV81 97 aa5.59□□□□□ -1.51
HERPUD2-206ENST00000438224 ANGP03950 147 aaKnown RBP5.59□□□□□ -1.51
HERPUD2-206ENST00000438224 RPL23P62829 140 aaKnown RBP5.59□□□□□ -1.51
HERPUD2-206ENST00000438224 C20orf203Q8NBC4 194 aa5.59□□□□□ -1.51
HERPUD2-206ENST00000438224 TSKUQ8WUA8 353 aa5.59□□□□□ -1.51
HERPUD2-206ENST00000438224 ISOC2Q96AB3 205 aa5.59□□□□□ -1.51
HERPUD2-206ENST00000438224 PRR34Q9NV39 138 aa5.59□□□□□ -1.51
HERPUD2-206ENST00000438224 AMTP48728 403 aa5.58□□□□□ -1.52
HERPUD2-206ENST00000438224 ELOBQ15370 118 aa5.58□□□□□ -1.52
HERPUD2-206ENST00000438224 TMEM97Q5BJF2 176 aa5.58□□□□□ -1.52
HERPUD2-206ENST00000438224 RMI2Q96E14 147 aa5.58□□□□□ -1.52
HERPUD2-206ENST00000438224 RNF185Q96GF1 192 aa5.58□□□□□ -1.52
HERPUD2-206ENST00000438224 URB1-AS1Q96HZ7 61 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms