RNA–Protein interactions for RNA: ENST00000437800.6

CD4-202, Transcript of CD4 molecule, humanhuman

TSL 2

Gene CD4, Length 2,117 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-202ENST00000437800 FAM19A4Q96LR4 140 aa11.01□□□□□ -0.65
CD4-202ENST00000437800 RHPN1-AS1Q9BWJ2 59 aa11.01□□□□□ -0.65
CD4-202ENST00000437800 MRPL35Q9NZE8 188 aaKnown RBP11.01□□□□□ -0.65
CD4-202ENST00000437800 SCGB1C2P0DMR2 95 aa11□□□□□ -0.65
CD4-202ENST00000437800 ID1P41134 155 aa11□□□□□ -0.65
CD4-202ENST00000437800 ANXA2RQ3ZCQ2 193 aa11□□□□□ -0.65
CD4-202ENST00000437800 TRAV4A0A0B4J268 109 aa11□□□□□ -0.65
CD4-202ENST00000437800 PRR9Q5T870 116 aa11□□□□□ -0.65
CD4-202ENST00000437800 FAM159AQ6UWV7 190 aa11□□□□□ -0.65
CD4-202ENST00000437800 ZFP2Q6ZN57 461 aa11□□□□□ -0.65
CD4-202ENST00000437800 MDFICQ9P1T7 246 aa11□□□□□ -0.65
CD4-202ENST00000437800 H3BVH4 76 aa10.99□□□□□ -0.65
CD4-202ENST00000437800 M0R381 172 aa10.99□□□□□ -0.65
CD4-202ENST00000437800 CCL24O00175 119 aa10.99□□□□□ -0.65
CD4-202ENST00000437800 MEIG1Q5JSS6 88 aa10.99□□□□□ -0.65
CD4-202ENST00000437800 NDUFA11Q86Y39 141 aa10.99□□□□□ -0.65
CD4-202ENST00000437800 SMIM2Q9BVW6 85 aa10.99□□□□□ -0.65
CD4-202ENST00000437800 TRAV12-1A0A0B4J245 112 aa10.98□□□□□ -0.65
CD4-202ENST00000437800 LGALS9O00182 355 aa10.98□□□□□ -0.65
CD4-202ENST00000437800 TCL1BO95988 128 aa10.98□□□□□ -0.65
CD4-202ENST00000437800 C5orf47Q569G3 176 aa10.98□□□□□ -0.65
CD4-202ENST00000437800 ORMDL2Q53FV1 153 aa10.97□□□□□ -0.65
CD4-202ENST00000437800 DPH3P1Q9H4G8 78 aa10.97□□□□□ -0.65
CD4-202ENST00000437800 TRAV26-2A0A0B4J265 109 aa10.96□□□□□ -0.65
CD4-202ENST00000437800 PPP1R17O96001 155 aa10.96□□□□□ -0.65
CD4-202ENST00000437800 Q6ZQT7 251 aa10.96□□□□□ -0.65
CD4-202ENST00000437800 RASL10AQ92737 203 aa10.96□□□□□ -0.65
CD4-202ENST00000437800 AGRNO00468 2067 aa10.96□□□□□ -0.66
CD4-202ENST00000437800 MRPL23Q16540 153 aaKnown RBP10.96□□□□□ -0.66
CD4-202ENST00000437800 POM121L12Q8N7R1 296 aa10.96□□□□□ -0.66
CD4-202ENST00000437800 PPDPFQ9H3Y8 114 aa10.96□□□□□ -0.66
CD4-202ENST00000437800 F8VRH5 84 aa10.95□□□□□ -0.66
CD4-202ENST00000437800 H7C1H1 209 aa10.95□□□□□ -0.66
CD4-202ENST00000437800 CD7P09564 240 aa10.95□□□□□ -0.66
CD4-202ENST00000437800 SUMO2P61956 95 aaKnown RBP10.95□□□□□ -0.66
CD4-202ENST00000437800 NXPH4O95158 308 aa10.94□□□□□ -0.66
CD4-202ENST00000437800 S100A4P26447 101 aaKnown RBP10.94□□□□□ -0.66
CD4-202ENST00000437800 RPL11P62913 178 aaKnown RBP10.94□□□□□ -0.66
CD4-202ENST00000437800 TOMM6Q96B49 74 aa10.94□□□□□ -0.66
CD4-202ENST00000437800 PKD1L1Q8TDX9 2849 aa10.94□□□□□ -0.66
CD4-202ENST00000437800 SLC25A20O43772 301 aa10.94□□□□□ -0.66
CD4-202ENST00000437800 DCANP1Q8TF63 244 aa10.94□□□□□ -0.66
CD4-202ENST00000437800 DNAJC30Q96LL9 226 aa10.94□□□□□ -0.66
CD4-202ENST00000437800 PHLDA3Q9Y5J5 127 aa10.94□□□□□ -0.66
CD4-202ENST00000437800 CMYA5Q8N3K9 4069 aa10.94□□□□□ -0.66
CD4-202ENST00000437800 IGKV3-7A0A075B6H7 116 aa10.93□□□□□ -0.66
CD4-202ENST00000437800 LINC01600Q96MT4 127 aa10.93□□□□□ -0.66
CD4-202ENST00000437800 CSDC2Q9Y534 153 aaKnown RBP10.93□□□□□ -0.66
CD4-202ENST00000437800 NOTCH3Q9UM47 2321 aa10.93□□□□□ -0.66
CD4-202ENST00000437800 SRSF9Q13242 221 aaKnown RBP eCLIP10.93□□□□□ -0.66
CD4-202ENST00000437800 PF4P02776 101 aa10.92□□□□□ -0.66
CD4-202ENST00000437800 C3orf56Q8N813 242 aa10.92□□□□□ -0.66
CD4-202ENST00000437800 KLLNB2CW77 178 aa10.91□□□□□ -0.66
CD4-202ENST00000437800 SPATA3Q8NHX4 192 aa10.91□□□□□ -0.66
CD4-202ENST00000437800 RNASE3P12724 160 aaKnown RBP10.91□□□□□ -0.66
CD4-202ENST00000437800 DEFB1P60022 68 aa10.91□□□□□ -0.66
CD4-202ENST00000437800 SFTA2Q6UW10 78 aa10.91□□□□□ -0.66
CD4-202ENST00000437800 C10orf126Q8N4M7 172 aa10.91□□□□□ -0.66
CD4-202ENST00000437800 PEMTQ9UBM1 199 aa10.91□□□□□ -0.66
CD4-202ENST00000437800 WIPF1O43516 503 aa10.9□□□□□ -0.66
CD4-202ENST00000437800 RNASE4P34096 147 aaKnown RBP10.9□□□□□ -0.66
CD4-202ENST00000437800 RPL13AP40429 203 aaKnown RBP10.9□□□□□ -0.66
CD4-202ENST00000437800 SCGB1D4Q6XE38 83 aa10.9□□□□□ -0.66
CD4-202ENST00000437800 NEXN-AS1Q8NBZ9 246 aa10.9□□□□□ -0.66
CD4-202ENST00000437800 ODF3Q96PU9 254 aa10.9□□□□□ -0.66
CD4-202ENST00000437800 SCGB3A1Q96QR1 104 aa10.9□□□□□ -0.66
CD4-202ENST00000437800 TRAV8-4A0A0B4J246 113 aa10.9□□□□□ -0.67
CD4-202ENST00000437800 C14orf178Q8N769 122 aaPredicted RBP10.9□□□□□ -0.67
CD4-202ENST00000437800 LINC00482Q8N8I6 264 aa10.9□□□□□ -0.67
CD4-202ENST00000437800 C15orf53Q8NAA6 179 aa10.9□□□□□ -0.67
CD4-202ENST00000437800 LINC01587Q99440 93 aa10.9□□□□□ -0.67
CD4-202ENST00000437800 SPANXDQ9BXN6 97 aa10.9□□□□□ -0.67
CD4-202ENST00000437800 ZNF815PA8K554 130 aa10.89□□□□□ -0.67
CD4-202ENST00000437800 KIF25-AS1Q9Y6Z4 181 aa10.89□□□□□ -0.67
CD4-202ENST00000437800 Q8N1Y9 231 aa10.88□□□□□ -0.67
CD4-202ENST00000437800 SORL1Q92673 2214 aa10.88□□□□□ -0.67
CD4-202ENST00000437800 C9JAW5 83 aa10.88□□□□□ -0.67
CD4-202ENST00000437800 F6UB75 175 aa10.88□□□□□ -0.67
CD4-202ENST00000437800 RPL39LQ96EH5 51 aaKnown RBP10.88□□□□□ -0.67
CD4-202ENST00000437800 PRADC1Q9BSG0 188 aa10.88□□□□□ -0.67
CD4-202ENST00000437800 K7EQG2 157 aa10.87□□□□□ -0.67
CD4-202ENST00000437800 GNRH2O43555 120 aa10.87□□□□□ -0.67
CD4-202ENST00000437800 DUSP14O95147 198 aaKnown RBP10.87□□□□□ -0.67
CD4-202ENST00000437800 LINC00315P59091 139 aa10.87□□□□□ -0.67
CD4-202ENST00000437800 C2orf66Q6UXQ4 117 aa10.87□□□□□ -0.67
CD4-202ENST00000437800 DYNLRB2Q8TF09 96 aa10.87□□□□□ -0.67
CD4-202ENST00000437800 MDFIQ99750 246 aa10.87□□□□□ -0.67
CD4-202ENST00000437800 SPANXCQ9NY87 97 aa10.87□□□□□ -0.67
CD4-202ENST00000437800 MUC4Q99102 2169 aa10.87□□□□□ -0.67
CD4-202ENST00000437800 PRO1854Q9UHT4 67 aa10.87□□□□□ -0.67
CD4-202ENST00000437800 TRAV2A0A0B4J234 112 aa10.86□□□□□ -0.67
CD4-202ENST00000437800 MGPP08493 103 aa10.85□□□□□ -0.67
CD4-202ENST00000437800 CFC1BP0CG36 223 aa10.85□□□□□ -0.67
CD4-202ENST00000437800 CFC1P0CG37 223 aa10.85□□□□□ -0.67
CD4-202ENST00000437800 P0DMU3 169 aa10.85□□□□□ -0.67
CD4-202ENST00000437800 FAM231AP0DMU4 169 aa10.85□□□□□ -0.67
CD4-202ENST00000437800 FAM231CP0DMU5 169 aa10.85□□□□□ -0.67
CD4-202ENST00000437800 BAALCQ8WXS3 180 aa10.85□□□□□ -0.67
CD4-202ENST00000437800 TMEM61Q8N0U2 210 aa10.85□□□□□ -0.67
CD4-202ENST00000437800 NTN5Q8WTR8 489 aaPredicted RBP10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms