RNA–Protein interactions for RNA: ENST00000435070.6

CPSF6-202, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPSF6, Length 6,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-202ENST00000435070 PSMB8P28062 276 aa5.63□□□□□ -1.51
CPSF6-202ENST00000435070 OVOL1O14753 267 aa5.63□□□□□ -1.51
CPSF6-202ENST00000435070 RELNP78509 3460 aa5.63□□□□□ -1.51
CPSF6-202ENST00000435070 A0A0J9YXV3 536 aa5.63□□□□□ -1.51
CPSF6-202ENST00000435070 H3BUX3 64 aa5.63□□□□□ -1.51
CPSF6-202ENST00000435070 NDUFA7O95182 113 aa5.63□□□□□ -1.51
CPSF6-202ENST00000435070 CXCL5P42830 114 aa5.63□□□□□ -1.51
CPSF6-202ENST00000435070 DAND5Q8N907 189 aa5.63□□□□□ -1.51
CPSF6-202ENST00000435070 NDUFC2-KCTD14E9PQ53 114 aa5.63□□□□□ -1.51
CPSF6-202ENST00000435070 AMELXQ99217 191 aa5.63□□□□□ -1.51
CPSF6-202ENST00000435070 P0DMU3 169 aa5.62□□□□□ -1.51
CPSF6-202ENST00000435070 FAM231AP0DMU4 169 aa5.62□□□□□ -1.51
CPSF6-202ENST00000435070 FAM231CP0DMU5 169 aa5.62□□□□□ -1.51
CPSF6-202ENST00000435070 C15orf32Q32M92 178 aa5.62□□□□□ -1.51
CPSF6-202ENST00000435070 C6orf226Q5I0X4 101 aa5.62□□□□□ -1.51
CPSF6-202ENST00000435070 RNASE13Q5GAN3 156 aaKnown RBP5.62□□□□□ -1.51
CPSF6-202ENST00000435070 ICOSQ9Y6W8 199 aa5.62□□□□□ -1.51
CPSF6-202ENST00000435070 A8MZ25 164 aa5.62□□□□□ -1.51
CPSF6-202ENST00000435070 IGIPA6NJ69 53 aa5.62□□□□□ -1.51
CPSF6-202ENST00000435070 F5H768 121 aa5.62□□□□□ -1.51
CPSF6-202ENST00000435070 UBE2AP49459 152 aa5.62□□□□□ -1.51
CPSF6-202ENST00000435070 RIF1Q5UIP0 2472 aaKnown RBP5.62□□□□□ -1.51
CPSF6-202ENST00000435070 A6NED7 52 aa5.62□□□□□ -1.51
CPSF6-202ENST00000435070 LY6HO94772 140 aa5.62□□□□□ -1.51
CPSF6-202ENST00000435070 SS18Q15532 418 aa5.62□□□□□ -1.51
CPSF6-202ENST00000435070 A0A0G2JNJ9 132 aa5.61□□□□□ -1.51
CPSF6-202ENST00000435070 SDHAF1A6NFY7 115 aa5.61□□□□□ -1.51
CPSF6-202ENST00000435070 Q9UFV3 132 aa5.61□□□□□ -1.51
CPSF6-202ENST00000435070 ANKHD1Q8IWZ3 2542 aaKnown RBP5.61□□□□□ -1.51
CPSF6-202ENST00000435070 B4DSR2 109 aa5.61□□□□□ -1.51
CPSF6-202ENST00000435070 MUC4Q99102 2169 aa5.61□□□□□ -1.51
CPSF6-202ENST00000435070 A0A0B4J2C4 111 aa5.61□□□□□ -1.51
CPSF6-202ENST00000435070 C3orf22Q8N5N4 141 aa5.61□□□□□ -1.51
CPSF6-202ENST00000435070 ZNF876PQ49A33 203 aa5.61□□□□□ -1.51
CPSF6-202ENST00000435070 GPHB5Q86YW7 130 aa5.61□□□□□ -1.51
CPSF6-202ENST00000435070 TMEM190Q8WZ59 177 aa5.61□□□□□ -1.51
CPSF6-202ENST00000435070 NKAPP1Q8N9T2 125 aa5.6□□□□□ -1.51
CPSF6-202ENST00000435070 A0A0J9YXY3 114 aa5.6□□□□□ -1.51
CPSF6-202ENST00000435070 RPL36AP83881 106 aaKnown RBP5.6□□□□□ -1.51
CPSF6-202ENST00000435070 RPL36ALQ969Q0 106 aaKnown RBP5.6□□□□□ -1.51
CPSF6-202ENST00000435070 FAM215AQ9Y5M1 114 aa5.6□□□□□ -1.51
CPSF6-202ENST00000435070 PRIMA1Q86XR5 153 aa5.6□□□□□ -1.51
CPSF6-202ENST00000435070 TECTAO75443 2155 aa5.6□□□□□ -1.51
CPSF6-202ENST00000435070 NANOS2P60321 138 aaKnown RBP5.6□□□□□ -1.51
CPSF6-202ENST00000435070 ADAMTSL4-AS1Q5T5F5 129 aa5.6□□□□□ -1.51
CPSF6-202ENST00000435070 TRBV7-1A0A0A6YYK4 115 aa5.6□□□□□ -1.51
CPSF6-202ENST00000435070 ZNF561-AS1K7EIQ3 104 aa5.6□□□□□ -1.51
CPSF6-202ENST00000435070 TRBV30A0A0K0K1B3 111 aa5.59□□□□□ -1.51
CPSF6-202ENST00000435070 I3L3M4 83 aa5.59□□□□□ -1.51
CPSF6-202ENST00000435070 FUSP35637 526 aaKnown RBP eCLIP5.59□□□□□ -1.513e-8■■■■□ 26.2
CPSF6-202ENST00000435070 IGHV4-4A0A075B6R2 117 aa5.59□□□□□ -1.51
CPSF6-202ENST00000435070 IGHV3-16A0A0C4DH30 117 aa5.59□□□□□ -1.51
CPSF6-202ENST00000435070 TMEM223A0PJW6 202 aa5.59□□□□□ -1.51
CPSF6-202ENST00000435070 RHOHQ15669 191 aa5.59□□□□□ -1.51
CPSF6-202ENST00000435070 TRAV23DV6A0A075B6W5 121 aa5.59□□□□□ -1.51
CPSF6-202ENST00000435070 MBD3L4A6NDZ8 208 aaPredicted RBP5.59□□□□□ -1.51
CPSF6-202ENST00000435070 MBD3L3A6NE82 208 aaPredicted RBP5.59□□□□□ -1.51
CPSF6-202ENST00000435070 MBD3L5A6NJ08 208 aaPredicted RBP5.59□□□□□ -1.51
CPSF6-202ENST00000435070 G3V318 75 aa5.59□□□□□ -1.51
CPSF6-202ENST00000435070 VCYO14598 125 aa5.59□□□□□ -1.51
CPSF6-202ENST00000435070 MBD3L2Q8NHZ7 208 aaPredicted RBP5.59□□□□□ -1.51
CPSF6-202ENST00000435070 SMCR5Q8TEV8 140 aa5.59□□□□□ -1.51
CPSF6-202ENST00000435070 A0A096LPF7 62 aa5.59□□□□□ -1.52
CPSF6-202ENST00000435070 H3BT86 120 aa5.59□□□□□ -1.52
CPSF6-202ENST00000435070 PMAIP1Q13794 54 aa5.59□□□□□ -1.52
CPSF6-202ENST00000435070 CASC2Q6XLA1 102 aa5.59□□□□□ -1.52
CPSF6-202ENST00000435070 KIR2DL5BQ8NHK3 375 aa5.59□□□□□ -1.52
CPSF6-202ENST00000435070 LINC00477Q96M19 166 aa5.59□□□□□ -1.52
CPSF6-202ENST00000435070 MAP1AP78559 2803 aaPredicted RBP5.59□□□□□ -1.52
CPSF6-202ENST00000435070 UQCRQO14949 82 aa5.58□□□□□ -1.52
CPSF6-202ENST00000435070 POM121L12Q8N7R1 296 aa5.58□□□□□ -1.52
CPSF6-202ENST00000435070 EBI3Q14213 229 aa5.58□□□□□ -1.52
CPSF6-202ENST00000435070 TRBV7-7A0A0K0K1E9 115 aa5.58□□□□□ -1.52
CPSF6-202ENST00000435070 IGKV3D-7A0A0C4DH55 119 aa5.58□□□□□ -1.52
CPSF6-202ENST00000435070 NDUFB1O75438 58 aa5.58□□□□□ -1.52
CPSF6-202ENST00000435070 IGHV3-30-3P0DP02 117 aa5.58□□□□□ -1.52
CPSF6-202ENST00000435070 FAM223BA6NKX1 122 aa5.58□□□□□ -1.52
CPSF6-202ENST00000435070 FAM223AQ8IWN6 122 aa5.58□□□□□ -1.52
CPSF6-202ENST00000435070 DCHS2Q6V1P9 2916 aa5.58□□□□□ -1.52
CPSF6-202ENST00000435070 IGHV1-69DA0A0B4J2H0 117 aa5.58□□□□□ -1.52
CPSF6-202ENST00000435070 ZFAND2AQ8N6M9 145 aa5.58□□□□□ -1.52
CPSF6-202ENST00000435070 CYSTM1Q9H1C7 97 aa5.58□□□□□ -1.52
CPSF6-202ENST00000435070 ZFAND3Q9H8U3 227 aa5.58□□□□□ -1.52
CPSF6-202ENST00000435070 RNASE3P12724 160 aaKnown RBP5.57□□□□□ -1.52
CPSF6-202ENST00000435070 TMEM141Q96I45 108 aa5.57□□□□□ -1.52
CPSF6-202ENST00000435070 BPESC1Q9GZL8 116 aa5.57□□□□□ -1.52
CPSF6-202ENST00000435070 TIMM21Q9BVV7 248 aa5.57□□□□□ -1.52
CPSF6-202ENST00000435070 NDUFA12Q9UI09 145 aa5.57□□□□□ -1.52
CPSF6-202ENST00000435070 C9orf47Q6ZRZ4 202 aa5.57□□□□□ -1.52
CPSF6-202ENST00000435070 IGHV1OR15-1A0A075B7D0 117 aa5.57□□□□□ -1.52
CPSF6-202ENST00000435070 IGHV4-28A0A0C4DH34 117 aa5.57□□□□□ -1.52
CPSF6-202ENST00000435070 LST1O00453 97 aa5.57□□□□□ -1.52
CPSF6-202ENST00000435070 POLR2KP53803 58 aaKnown RBP5.57□□□□□ -1.52
CPSF6-202ENST00000435070 XCL2Q9UBD3 114 aa5.57□□□□□ -1.52
CPSF6-202ENST00000435070 TIMM17AQ99595 171 aa5.57□□□□□ -1.52
CPSF6-202ENST00000435070 RNF5Q99942 180 aa5.57□□□□□ -1.52
CPSF6-202ENST00000435070 KLK9Q9UKQ9 250 aa5.57□□□□□ -1.52
CPSF6-202ENST00000435070 ANKRD11Q6UB99 2663 aaPredicted RBP5.57□□□□□ -1.52
CPSF6-202ENST00000435070 HRCT1Q6UXD1 115 aa5.56□□□□□ -1.52
CPSF6-202ENST00000435070 KAAG1Q9UBP8 84 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms