RNA–Protein interactions for RNA: ENST00000434651.6

HLA-DQB1-205, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB1, Length 1,642 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-205ENST00000434651 HIGD1CA8MV81 97 aa10.37□□□□□ -0.75
HLA-DQB1-205ENST00000434651 ESDP10768 282 aa10.37□□□□□ -0.75
HLA-DQB1-205ENST00000434651 GAGE4Q13068 117 aa10.37□□□□□ -0.75
HLA-DQB1-205ENST00000434651 GAGE5Q13069 117 aa10.37□□□□□ -0.75
HLA-DQB1-205ENST00000434651 GAGE13Q4V321 117 aa10.37□□□□□ -0.75
HLA-DQB1-205ENST00000434651 PDZD11Q5EBL8 140 aa10.37□□□□□ -0.75
HLA-DQB1-205ENST00000434651 OR10G8Q8NGN5 311 aa10.37□□□□□ -0.75
HLA-DQB1-205ENST00000434651 ZNRF2Q8NHG8 242 aa10.37□□□□□ -0.75
HLA-DQB1-205ENST00000434651 A8MWL6 223 aa10.36□□□□□ -0.75
HLA-DQB1-205ENST00000434651 TWIST1Q15672 202 aa10.36□□□□□ -0.75
HLA-DQB1-205ENST00000434651 ZNF56Q15929 161 aa10.36□□□□□ -0.75
HLA-DQB1-205ENST00000434651 MRPL23Q16540 153 aaKnown RBP10.36□□□□□ -0.75
HLA-DQB1-205ENST00000434651 C5orf47Q569G3 176 aa10.36□□□□□ -0.75
HLA-DQB1-205ENST00000434651 TSKUQ8WUA8 353 aa10.36□□□□□ -0.75
HLA-DQB1-205ENST00000434651 F2Z2F3 143 aa10.36□□□□□ -0.75
HLA-DQB1-205ENST00000434651 SRIP30626 198 aa10.36□□□□□ -0.75
HLA-DQB1-205ENST00000434651 CCL18P55774 89 aa10.36□□□□□ -0.75
HLA-DQB1-205ENST00000434651 RHOHQ15669 191 aa10.36□□□□□ -0.75
HLA-DQB1-205ENST00000434651 CT83Q5H943 113 aa10.36□□□□□ -0.75
HLA-DQB1-205ENST00000434651 NEGR1Q7Z3B1 354 aa10.36□□□□□ -0.75
HLA-DQB1-205ENST00000434651 CNFNQ9BYD5 112 aa10.36□□□□□ -0.75
HLA-DQB1-205ENST00000434651 F5H697 171 aa10.35□□□□□ -0.75
HLA-DQB1-205ENST00000434651 MGPP08493 103 aa10.35□□□□□ -0.75
HLA-DQB1-205ENST00000434651 PNRC1Q12796 327 aaPredicted RBP10.35□□□□□ -0.75
HLA-DQB1-205ENST00000434651 STPG4Q8N801 248 aa10.35□□□□□ -0.75
HLA-DQB1-205ENST00000434651 NUP35Q8NFH5 326 aa10.35□□□□□ -0.75
HLA-DQB1-205ENST00000434651 BTF3L4Q96K17 158 aa10.35□□□□□ -0.75
HLA-DQB1-205ENST00000434651 CTDSP1Q9GZU7 261 aa10.35□□□□□ -0.75
HLA-DQB1-205ENST00000434651 URGCP-MRPS24S4R325 110 aa10.35□□□□□ -0.75
HLA-DQB1-205ENST00000434651 DNAH17Q9UFH2 4485 aa10.35□□□□□ -0.75
HLA-DQB1-205ENST00000434651 RHODO00212 210 aa10.34□□□□□ -0.75
HLA-DQB1-205ENST00000434651 LINC00694P0DN24 101 aa10.34□□□□□ -0.75
HLA-DQB1-205ENST00000434651 CACNG7P62955 275 aa10.34□□□□□ -0.75
HLA-DQB1-205ENST00000434651 AP1S3Q96PC3 154 aa10.34□□□□□ -0.75
HLA-DQB1-205ENST00000434651 PRADC1Q9BSG0 188 aa10.34□□□□□ -0.75
HLA-DQB1-205ENST00000434651 VAMP8Q9BV40 100 aa10.34□□□□□ -0.75
HLA-DQB1-205ENST00000434651 KRTAP1-5Q9BYS1 174 aa10.34□□□□□ -0.75
HLA-DQB1-205ENST00000434651 TRAV26-2A0A0B4J265 109 aa10.33□□□□□ -0.76
HLA-DQB1-205ENST00000434651 GAS8-AS1O95177 125 aa10.33□□□□□ -0.76
HLA-DQB1-205ENST00000434651 WFDC10BQ8IUB3 73 aa10.33□□□□□ -0.76
HLA-DQB1-205ENST00000434651 DEFB104AQ8WTQ1 72 aa10.33□□□□□ -0.76
HLA-DQB1-205ENST00000434651 VAMP3Q15836 100 aa10.33□□□□□ -0.76
HLA-DQB1-205ENST00000434651 SUMO4Q6EEV6 95 aa10.33□□□□□ -0.76
HLA-DQB1-205ENST00000434651 NEXN-AS1Q8NBZ9 246 aa10.33□□□□□ -0.76
HLA-DQB1-205ENST00000434651 IGHV3-38A0A0C4DH36 116 aa10.32□□□□□ -0.76
HLA-DQB1-205ENST00000434651 SMIM27A0A1W2PRY6 76 aa10.32□□□□□ -0.76
HLA-DQB1-205ENST00000434651 BATFQ16520 125 aa10.32□□□□□ -0.76
HLA-DQB1-205ENST00000434651 Q8N3U1 123 aa10.32□□□□□ -0.76
HLA-DQB1-205ENST00000434651 Q9H8V8 135 aa10.32□□□□□ -0.76
HLA-DQB1-205ENST00000434651 M0QY20 66 aa10.31□□□□□ -0.76
HLA-DQB1-205ENST00000434651 ATP6V0E2Q8NHE4 81 aa10.31□□□□□ -0.76
HLA-DQB1-205ENST00000434651 GFRA4Q9GZZ7 299 aa10.31□□□□□ -0.76
HLA-DQB1-205ENST00000434651 A0A1B0GUT8 65 aa10.3□□□□□ -0.76
HLA-DQB1-205ENST00000434651 F8WDY8 70 aa10.3□□□□□ -0.76
HLA-DQB1-205ENST00000434651 FAM3BP58499 235 aaPredicted RBP10.3□□□□□ -0.76
HLA-DQB1-205ENST00000434651 DPH3P1Q9H4G8 78 aa10.3□□□□□ -0.76
HLA-DQB1-205ENST00000434651 PKD1P98161 4303 aa10.3□□□□□ -0.76
HLA-DQB1-205ENST00000434651 HNRNPA3P51991 378 aaKnown RBP10.29□□□□□ -0.76
HLA-DQB1-205ENST00000434651 Q6ZR54 194 aa10.29□□□□□ -0.76
HLA-DQB1-205ENST00000434651 GATD1Q8NB37 220 aa10.29□□□□□ -0.76
HLA-DQB1-205ENST00000434651 GEMIN7Q9H840 131 aaKnown RBP10.29□□□□□ -0.76
HLA-DQB1-205ENST00000434651 FAM231BA6NCW3 169 aa10.29□□□□□ -0.76
HLA-DQB1-205ENST00000434651 UPK3BQ9BT76 320 aa10.29□□□□□ -0.76
HLA-DQB1-205ENST00000434651 NAT8BQ9UHF3 227 aa10.29□□□□□ -0.76
HLA-DQB1-205ENST00000434651 HECTD4Q9Y4D8 3996 aa10.28□□□□□ -0.76
HLA-DQB1-205ENST00000434651 UBE2D3P61077 147 aa10.28□□□□□ -0.76
HLA-DQB1-205ENST00000434651 UBE2D2P62837 147 aa10.28□□□□□ -0.76
HLA-DQB1-205ENST00000434651 MRPL54Q6P161 138 aaKnown RBP10.28□□□□□ -0.76
HLA-DQB1-205ENST00000434651 RPL39LQ96EH5 51 aaKnown RBP10.28□□□□□ -0.76
HLA-DQB1-205ENST00000434651 RNF185Q96GF1 192 aa10.28□□□□□ -0.76
HLA-DQB1-205ENST00000434651 GTSF1LQ9H1H1 148 aa10.28□□□□□ -0.76
HLA-DQB1-205ENST00000434651 DNAH11Q96DT5 4516 aa10.28□□□□□ -0.76
HLA-DQB1-205ENST00000434651 TRBV7-3A0A075B6L6 115 aa10.27□□□□□ -0.77
HLA-DQB1-205ENST00000434651 NBDYA0A0U1RRE5 68 aa10.27□□□□□ -0.77
HLA-DQB1-205ENST00000434651 CAMPP49913 170 aa10.27□□□□□ -0.77
HLA-DQB1-205ENST00000434651 AMN1Q8IY45 258 aa10.27□□□□□ -0.77
HLA-DQB1-205ENST00000434651 PKHD1P08F94 4074 aa10.26□□□□□ -0.77
HLA-DQB1-205ENST00000434651 SMKR1H3BMG3 65 aa10.26□□□□□ -0.77
HLA-DQB1-205ENST00000434651 J3QR89 54 aa10.26□□□□□ -0.77
HLA-DQB1-205ENST00000434651 SIVA1O15304 175 aa10.26□□□□□ -0.77
HLA-DQB1-205ENST00000434651 GAGE6Q13070 117 aa10.26□□□□□ -0.77
HLA-DQB1-205ENST00000434651 GTF2H5Q6ZYL4 71 aa10.26□□□□□ -0.77
HLA-DQB1-205ENST00000434651 TRBV10-1A0A0K0K1A3 114 aa10.25□□□□□ -0.77
HLA-DQB1-205ENST00000434651 RPL32P62910 135 aaKnown RBP10.25□□□□□ -0.77
HLA-DQB1-205ENST00000434651 RPL36AP83881 106 aaKnown RBP10.25□□□□□ -0.77
HLA-DQB1-205ENST00000434651 RPL36ALQ969Q0 106 aaKnown RBP10.25□□□□□ -0.77
HLA-DQB1-205ENST00000434651 OR10J3Q5JRS4 329 aa10.25□□□□□ -0.77
HLA-DQB1-205ENST00000434651 NTM-AS1Q6ZSK4 140 aa10.25□□□□□ -0.77
HLA-DQB1-205ENST00000434651 BOD1L2Q8IYS8 172 aa10.25□□□□□ -0.77
HLA-DQB1-205ENST00000434651 BORCS7Q96B45 105 aa10.25□□□□□ -0.77
HLA-DQB1-205ENST00000434651 RTL8CO15255 209 aa10.24□□□□□ -0.77
HLA-DQB1-205ENST00000434651 NCR2O95944 276 aa10.24□□□□□ -0.77
HLA-DQB1-205ENST00000434651 IGLC3P0DOY3 106 aa10.24□□□□□ -0.77
HLA-DQB1-205ENST00000434651 RASL11AQ6T310 242 aa10.24□□□□□ -0.77
HLA-DQB1-205ENST00000434651 TMEM191AQ9H0A3 160 aa10.24□□□□□ -0.77
HLA-DQB1-205ENST00000434651 A0A1B0GXF2 115 aa10.23□□□□□ -0.77
HLA-DQB1-205ENST00000434651 RIGQ13278 110 aa10.23□□□□□ -0.77
HLA-DQB1-205ENST00000434651 LELP1Q5T871 98 aa10.23□□□□□ -0.77
HLA-DQB1-205ENST00000434651 SH2D6Q7Z4S9 175 aa10.23□□□□□ -0.77
HLA-DQB1-205ENST00000434651 IGHV3-30P01768 117 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms