RNA–Protein interactions for RNA: ENST00000433709.6

HDAC9-213, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-213ENST00000433709 RNASE3P12724 160 aaKnown RBP3.63□□□□□ -1.83
HDAC9-213ENST00000433709 Q0VG73 95 aa3.63□□□□□ -1.83
HDAC9-213ENST00000433709 Q6ZRN7 208 aaPredicted RBP3.63□□□□□ -1.83
HDAC9-213ENST00000433709 Q86TA4 180 aa3.63□□□□□ -1.83
HDAC9-213ENST00000433709 KCNRGQ8N5I3 272 aa3.63□□□□□ -1.83
HDAC9-213ENST00000433709 SFT2D1Q8WV19 159 aa3.63□□□□□ -1.83
HDAC9-213ENST00000433709 FRZBQ92765 325 aa3.63□□□□□ -1.83
HDAC9-213ENST00000433709 SMIM12Q96EX1 92 aa3.63□□□□□ -1.83
HDAC9-213ENST00000433709 MANBALQ9NQG1 85 aa3.63□□□□□ -1.83
HDAC9-213ENST00000433709 DNAH7Q8WXX0 4024 aa3.63□□□□□ -1.83
HDAC9-213ENST00000433709 A0A087WX48 190 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 KRBOX1C9JBD0 128 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 H7C1H1 209 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 LTAP01374 205 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 IFNA1P01562 189 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 ARMS2P0C7Q2 107 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 SMIM17P0DL12 118 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 ZNF80P51504 273 aaPredicted RBP3.62□□□□□ -1.83
HDAC9-213ENST00000433709 UBE2G2P60604 165 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 RPS20P60866 119 aaKnown RBP3.62□□□□□ -1.83
HDAC9-213ENST00000433709 RAB4BP61018 213 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 Q6ZQT7 251 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 WFDC10BQ8IUB3 73 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 C14orf178Q8N769 122 aaPredicted RBP3.62□□□□□ -1.83
HDAC9-213ENST00000433709 Q8N976 141 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 MBD3L1Q8WWY6 194 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 SFRP2Q96HF1 295 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 LINC00167Q96N53 147 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 TMEM70Q9BUB7 260 aa3.62□□□□□ -1.83
HDAC9-213ENST00000433709 ZNF471Q9BX82 626 aaPredicted RBP3.62□□□□□ -1.83
HDAC9-213ENST00000433709 MUC4Q99102 2169 aa3.61□□□□□ -1.83
HDAC9-213ENST00000433709 TRBV7-3A0A075B6L6 115 aa3.61□□□□□ -1.83
HDAC9-213ENST00000433709 TRAV1-1A0A0B4J248 108 aa3.61□□□□□ -1.83
HDAC9-213ENST00000433709 FAM231BA6NCW3 169 aa3.61□□□□□ -1.83
HDAC9-213ENST00000433709 PDE6DO43924 150 aa3.61□□□□□ -1.83
HDAC9-213ENST00000433709 SH2D1AO60880 128 aa3.61□□□□□ -1.83
HDAC9-213ENST00000433709 OR5AL1P0C617 328 aa3.61□□□□□ -1.83
HDAC9-213ENST00000433709 PRR4Q16378 134 aa3.61□□□□□ -1.83
HDAC9-213ENST00000433709 Q5BKY6 102 aa3.61□□□□□ -1.83
HDAC9-213ENST00000433709 FAM74A4Q5TZK3 123 aa3.61□□□□□ -1.83
HDAC9-213ENST00000433709 SPANXN1Q5VSR9 72 aa3.61□□□□□ -1.83
HDAC9-213ENST00000433709 BAGE2Q86Y30 109 aa3.61□□□□□ -1.83
HDAC9-213ENST00000433709 FAM213BQ8TBF2 198 aa3.61□□□□□ -1.83
HDAC9-213ENST00000433709 RYR3Q15413 4870 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 LYSTQ99698 3801 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 IGHV3-73A0A0B4J1V6 119 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 RBFOX3A6NFN3 312 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 F2Z2F3 143 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 H3BVH4 76 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 M0R036 132 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 M0R381 172 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 EIF3GO75821 320 aaKnown RBP eCLIP3.6□□□□□ -1.83
HDAC9-213ENST00000433709 CRPP02741 224 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 CACNG7P62955 275 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 ZNF726P1Q15940 193 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 Q6ZVH6 145 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 DAZ4Q86SG3 579 aaKnown RBP3.6□□□□□ -1.83
HDAC9-213ENST00000433709 Q8N814 137 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 ZC2HC1AQ96GY0 325 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 DNAJC30Q96LL9 226 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 FAM210AQ96ND0 272 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 DAZ3Q9NR90 486 aaKnown RBP3.6□□□□□ -1.83
HDAC9-213ENST00000433709 CYTL1Q9NRR1 136 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 STARD9Q9P2P6 4700 aa3.6□□□□□ -1.83
HDAC9-213ENST00000433709 LOC100131303A0A0U1RQF7 123 aa3.59□□□□□ -1.83
HDAC9-213ENST00000433709 E9PLD3 99 aa3.59□□□□□ -1.83
HDAC9-213ENST00000433709 IGHV3-30P01768 117 aa3.59□□□□□ -1.83
HDAC9-213ENST00000433709 IGHV3-33P01772 117 aa3.59□□□□□ -1.83
HDAC9-213ENST00000433709 TRGC1P0CF51 173 aa3.59□□□□□ -1.83
HDAC9-213ENST00000433709 IGHV3-30-3P0DP02 117 aa3.59□□□□□ -1.83
HDAC9-213ENST00000433709 IGHV3-30-5P0DP03 117 aa3.59□□□□□ -1.83
HDAC9-213ENST00000433709 RPL32P62910 135 aaKnown RBP3.59□□□□□ -1.83
HDAC9-213ENST00000433709 ZNF56Q15929 161 aa3.59□□□□□ -1.83
HDAC9-213ENST00000433709 SMIM15Q7Z3B0 74 aa3.59□□□□□ -1.83
HDAC9-213ENST00000433709 AP1S3Q96PC3 154 aa3.59□□□□□ -1.83
HDAC9-213ENST00000433709 DYNC2H1Q8NCM8 4307 aaKnown RBP3.59□□□□□ -1.84
HDAC9-213ENST00000433709 TRBV6-8A0A0A6YYG3 113 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 GRIFINA4D1Z8 144 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 TMEM262E9PQX1 116 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 SNAI2O43623 268 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 LINC00694P0DN24 101 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 GZMBP10144 247 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 GNG4P50150 75 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 CRIP1P50238 77 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 UBE2D3P61077 147 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 UBE2D2P62837 147 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 CCL20P78556 96 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 MEF2BQ02080 365 aaPredicted RBP3.58□□□□□ -1.84
HDAC9-213ENST00000433709 MIAQ16674 131 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 TEX261Q6UWH6 196 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 NIT1Q86X76 327 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 ALMS1Q8TCU4 4167 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 RYR2Q92736 4967 aa3.58□□□□□ -1.84
HDAC9-213ENST00000433709 TRBV25-1A0A075B6N4 114 aa3.57□□□□□ -1.84
HDAC9-213ENST00000433709 IGKV2D-24A0A075B6R9 120 aa3.57□□□□□ -1.84
HDAC9-213ENST00000433709 TMSB15BA0A087X1C1 80 aa3.57□□□□□ -1.84
HDAC9-213ENST00000433709 LRCOL1A6NCL2 159 aa3.57□□□□□ -1.84
HDAC9-213ENST00000433709 P01737 135 aa3.57□□□□□ -1.84
HDAC9-213ENST00000433709 INAFM2P0DMQ5 153 aa3.57□□□□□ -1.84
HDAC9-213ENST00000433709 RPL35P42766 123 aaKnown RBP3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms