RNA–Protein interactions for RNA: ENST00000433260.1

HMGB3P24-201, Transcript of high mobility group box 3 pseudogene 24, humanhuman

BASIC

Gene HMGB3P24, Length 622 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P24-201ENST00000433260 KRTAP10-2P60368 255 aa3.87□□□□□ -1.79
HMGB3P24-201ENST00000433260 CLLU1Q5K131 121 aa3.87□□□□□ -1.79
HMGB3P24-201ENST00000433260 Q6ZRN7 208 aaPredicted RBP3.87□□□□□ -1.79
HMGB3P24-201ENST00000433260 NIT1Q86X76 327 aa3.87□□□□□ -1.79
HMGB3P24-201ENST00000433260 C10orf126Q8N4M7 172 aa3.87□□□□□ -1.79
HMGB3P24-201ENST00000433260 NUP35Q8NFH5 326 aa3.87□□□□□ -1.79
HMGB3P24-201ENST00000433260 GFRA4Q9GZZ7 299 aa3.87□□□□□ -1.79
HMGB3P24-201ENST00000433260 NAT8BQ9UHF3 227 aa3.87□□□□□ -1.79
HMGB3P24-201ENST00000433260 EPPK1P58107 5090 aaKnown RBP3.86□□□□□ -1.79
HMGB3P24-201ENST00000433260 C16orf90A8MZG2 172 aa3.86□□□□□ -1.79
HMGB3P24-201ENST00000433260 SMKR1H3BMG3 65 aa3.86□□□□□ -1.79
HMGB3P24-201ENST00000433260 K7EP13 123 aa3.86□□□□□ -1.79
HMGB3P24-201ENST00000433260 ANGP03950 147 aaKnown RBP3.86□□□□□ -1.79
HMGB3P24-201ENST00000433260 RAB4AP20338 218 aa3.86□□□□□ -1.79
HMGB3P24-201ENST00000433260 RIGQ13278 110 aa3.86□□□□□ -1.79
HMGB3P24-201ENST00000433260 COTL1Q14019 142 aa3.86□□□□□ -1.79
HMGB3P24-201ENST00000433260 MPV17L2Q567V2 206 aa3.86□□□□□ -1.79
HMGB3P24-201ENST00000433260 ATRAIDQ6UW56 229 aa3.86□□□□□ -1.79
HMGB3P24-201ENST00000433260 Q8N976 141 aa3.86□□□□□ -1.79
HMGB3P24-201ENST00000433260 UBE2WQ96B02 151 aa3.86□□□□□ -1.79
HMGB3P24-201ENST00000433260 CNFNQ9BYD5 112 aa3.86□□□□□ -1.79
HMGB3P24-201ENST00000433260 TRBV25-1A0A075B6N4 114 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 IGKV2D-24A0A075B6R9 120 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 A0A087WTM6 91 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 TRAV8-3A0A0A6YYJ7 113 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 IGHV1-24A0A0C4DH33 117 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 SMIM27A0A1W2PRY6 76 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 FAM231BA6NCW3 169 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 LECT2O14960 151 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 PMCHP20382 165 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 PTTG1IPP53801 180 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 ELOBQ15370 118 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 TMEM97Q5BJF2 176 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 MRPL54Q6P161 138 aaKnown RBP3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 AMN1Q8IY45 258 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 SLC7A5P1Q8MH63 180 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 RNF185Q96GF1 192 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 TMEM191AQ9H0A3 160 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 CBY1Q9Y3M2 126 aa3.85□□□□□ -1.79
HMGB3P24-201ENST00000433260 KMT2AQ03164 3969 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 IGKV3OR2-268A0A0C4DH90 116 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 SDHAF1A6NFY7 115 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 GAGE10A6NGK3 116 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 F8W036 122 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 I3L3M4 83 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 UBE2L6O14933 153 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 NCR2O95944 276 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 RPS10P46783 165 aaKnown RBP3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 AMTP48728 403 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 RBX1P62877 108 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 MRPL51Q4U2R6 128 aaKnown RBP3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 CLPSL2Q6UWE3 100 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 ENHOQ6UWT2 76 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 LINC00269Q8N2A0 174 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 MAPKAPK5-AS1Q8N8E1 139 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 BAALCQ8WXS3 180 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 TM2D2Q9BX73 214 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 ST20Q9HBF5 79 aa3.84□□□□□ -1.79
HMGB3P24-201ENST00000433260 VPS13DQ5THJ4 4388 aa3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 IGLV10-54A0A075B6I4 117 aa3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 IGKV2-29A2NJV5 120 aaPredicted RBP3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 LRCOL1A6NCL2 159 aa3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 PPP1R2P9O14990 202 aa3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 CRPP02741 224 aa3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 MT-ND4LP03901 98 aa3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 WFDC2Q14508 124 aa3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 LAGE3Q14657 143 aa3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 IQCJQ1A5X6 159 aa3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 COMMD7Q86VX2 200 aa3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 FRZBQ92765 325 aa3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 RMI2Q96E14 147 aa3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 TMEM243Q9BU79 118 aa3.83□□□□□ -1.8
HMGB3P24-201ENST00000433260 IGLV4-60A0A075B6I1 120 aa3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 TMEM218A2RU14 115 aa3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 ADCYAP1P18509 176 aa3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 CKS2P33552 79 aa3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 REG3AQ06141 175 aa3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 Q0VG73 95 aa3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 PNRC1Q12796 327 aaPredicted RBP3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 FAM104BQ5XKR9 115 aa3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 AMMECR1LQ6DCA0 310 aa3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 RNASEKQ6P5S7 137 aaKnown RBP3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 UQCC3Q6UW78 93 aa3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 Q8N814 137 aa3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 C20orf203Q8NBC4 194 aa3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 MRAP2Q96G30 205 aa3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 CHCHD7Q9BUK0 85 aa3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 TMEM242Q9NWH2 141 aa3.82□□□□□ -1.8
HMGB3P24-201ENST00000433260 IGLV5-52A0A0A0MRZ9 124 aa3.81□□□□□ -1.8
HMGB3P24-201ENST00000433260 TRBV6-5A0A0K0K1A5 114 aa3.81□□□□□ -1.8
HMGB3P24-201ENST00000433260 A0A1B0GW15 77 aa3.81□□□□□ -1.8
HMGB3P24-201ENST00000433260 D6R8Y8 96 aa3.81□□□□□ -1.8
HMGB3P24-201ENST00000433260 VCYO14598 125 aa3.81□□□□□ -1.8
HMGB3P24-201ENST00000433260 TSHBP01222 138 aa3.81□□□□□ -1.8
HMGB3P24-201ENST00000433260 HLA-DQA1P01909 254 aa3.81□□□□□ -1.8
HMGB3P24-201ENST00000433260 APCSP02743 223 aa3.81□□□□□ -1.8
HMGB3P24-201ENST00000433260 S100A8P05109 93 aa3.81□□□□□ -1.8
HMGB3P24-201ENST00000433260 POLR2KP53803 58 aaKnown RBP3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms