RNA–Protein interactions for RNA: ENST00000431737.1

LINC00840-201, long intergenic non-protein coding RNA 840, humanhuman

TSL 2 BASIC

Gene LINC00840, Length 1,974 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00840-201ENST00000431737 TRBV10-1A0A0K0K1A3 114 aa9.08□□□□□ -0.96
LINC00840-201ENST00000431737 C11orf86A6NJI1 115 aa9.08□□□□□ -0.96
LINC00840-201ENST00000431737 TAX1BP3O14907 124 aa9.08□□□□□ -0.96
LINC00840-201ENST00000431737 OR11H2Q8NH07 326 aa9.08□□□□□ -0.96
LINC00840-201ENST00000431737 CITED1Q99966 193 aa9.08□□□□□ -0.96
LINC00840-201ENST00000431737 OVOL2Q9BRP0 275 aa9.08□□□□□ -0.96
LINC00840-201ENST00000431737 IGLV4-3A0A075B6K6 122 aa9.08□□□□□ -0.96
LINC00840-201ENST00000431737 CIDEAO60543 219 aa9.08□□□□□ -0.96
LINC00840-201ENST00000431737 RPL35AP18077 110 aaKnown RBP9.08□□□□□ -0.96
LINC00840-201ENST00000431737 C9orf66Q5T8R8 295 aa9.08□□□□□ -0.96
LINC00840-201ENST00000431737 OR4C5Q8NGB2 326 aa9.08□□□□□ -0.96
LINC00840-201ENST00000431737 CHAC1Q9BUX1 264 aa9.08□□□□□ -0.96
LINC00840-201ENST00000431737 TTTY13Q9BZ97 58 aa9.08□□□□□ -0.96
LINC00840-201ENST00000431737 TENM1Q9UKZ4 2725 aa9.07□□□□□ -0.96
LINC00840-201ENST00000431737 Q6ZTI0 123 aa9.07□□□□□ -0.96
LINC00840-201ENST00000431737 DEFB104AQ8WTQ1 72 aa9.07□□□□□ -0.96
LINC00840-201ENST00000431737 CHCHD7Q9BUK0 85 aa9.07□□□□□ -0.96
LINC00840-201ENST00000431737 Q9UF83 564 aa9.07□□□□□ -0.96
LINC00840-201ENST00000431737 TAL2Q16559 108 aa9.06□□□□□ -0.96
LINC00840-201ENST00000431737 MAPKAPK5-AS1Q8N8E1 139 aa9.06□□□□□ -0.96
LINC00840-201ENST00000431737 FAM104AQ969W3 186 aa9.06□□□□□ -0.96
LINC00840-201ENST00000431737 AMELXQ99217 191 aa9.06□□□□□ -0.96
LINC00840-201ENST00000431737 SPANXA1Q9NS26 97 aa9.06□□□□□ -0.96
LINC00840-201ENST00000431737 VWFP04275 2813 aa9.06□□□□□ -0.96
LINC00840-201ENST00000431737 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.06□□□□□ -0.96
LINC00840-201ENST00000431737 PRADC1Q9BSG0 188 aa9.06□□□□□ -0.96
LINC00840-201ENST00000431737 TRAV8-6A0A0B4J262 113 aa9.05□□□□□ -0.96
LINC00840-201ENST00000431737 MYMXA0A1B0GTQ4 84 aa9.05□□□□□ -0.96
LINC00840-201ENST00000431737 A6NDN8 102 aa9.05□□□□□ -0.96
LINC00840-201ENST00000431737 K7EQD1 137 aa9.05□□□□□ -0.96
LINC00840-201ENST00000431737 HERVK_113P61574 105 aa9.05□□□□□ -0.96
LINC00840-201ENST00000431737 RRN3P1Q2M238 152 aa9.05□□□□□ -0.96
LINC00840-201ENST00000431737 ZNRF2Q8NHG8 242 aa9.05□□□□□ -0.96
LINC00840-201ENST00000431737 ZNF479Q96JC4 524 aa9.05□□□□□ -0.96
LINC00840-201ENST00000431737 TEP1Q99973 2627 aaKnown RBP9.05□□□□□ -0.96
LINC00840-201ENST00000431737 NOTCH3Q9UM47 2321 aa9.05□□□□□ -0.96
LINC00840-201ENST00000431737 COTL1Q14019 142 aa9.04□□□□□ -0.96
LINC00840-201ENST00000431737 TM2D2Q9BX73 214 aa9.04□□□□□ -0.96
LINC00840-201ENST00000431737 TRBV7-3A0A075B6L6 115 aa9.04□□□□□ -0.96
LINC00840-201ENST00000431737 OPRPNQ99935 248 aaPredicted RBP9.04□□□□□ -0.96
LINC00840-201ENST00000431737 TIMM21Q9BVV7 248 aa9.04□□□□□ -0.96
LINC00840-201ENST00000431737 VCX2Q9H322 139 aa9.04□□□□□ -0.96
LINC00840-201ENST00000431737 NOP10Q9NPE3 64 aaKnown RBP9.04□□□□□ -0.96
LINC00840-201ENST00000431737 UBE2D4Q9Y2X8 147 aa9.04□□□□□ -0.96
LINC00840-201ENST00000431737 WIPF1O43516 503 aa9.03□□□□□ -0.96
LINC00840-201ENST00000431737 ATRQ13535 2644 aa9.03□□□□□ -0.96
LINC00840-201ENST00000431737 H3BRM9 83 aa9.03□□□□□ -0.96
LINC00840-201ENST00000431737 MRPS36P82909 103 aaKnown RBP9.03□□□□□ -0.96
LINC00840-201ENST00000431737 RPL36AP83881 106 aaKnown RBP9.03□□□□□ -0.96
LINC00840-201ENST00000431737 Q6ZVH6 145 aa9.03□□□□□ -0.96
LINC00840-201ENST00000431737 RPL36ALQ969Q0 106 aaKnown RBP9.03□□□□□ -0.96
LINC00840-201ENST00000431737 UBE2D3P61077 147 aa9.02□□□□□ -0.97
LINC00840-201ENST00000431737 UBE2D2P62837 147 aa9.02□□□□□ -0.97
LINC00840-201ENST00000431737 DAZ4Q86SG3 579 aaKnown RBP9.02□□□□□ -0.97
LINC00840-201ENST00000431737 LINC00612Q8N6U2 182 aa9.02□□□□□ -0.97
LINC00840-201ENST00000431737 SPATA3Q8NHX4 192 aa9.02□□□□□ -0.97
LINC00840-201ENST00000431737 DAZ3Q9NR90 486 aaKnown RBP9.02□□□□□ -0.97
LINC00840-201ENST00000431737 TMEM223A0PJW6 202 aa9.01□□□□□ -0.97
LINC00840-201ENST00000431737 ZNF22P17026 224 aaPredicted RBP9.01□□□□□ -0.97
LINC00840-201ENST00000431737 EMP1P54849 157 aa9.01□□□□□ -0.97
LINC00840-201ENST00000431737 CEND1Q8N111 149 aa9.01□□□□□ -0.97
LINC00840-201ENST00000431737 WFDC9Q8NEX5 89 aa9.01□□□□□ -0.97
LINC00840-201ENST00000431737 F8P00451 2351 aa9.01□□□□□ -0.97
LINC00840-201ENST00000431737 TRBV6-4A0A1B0GX49 114 aa9.01□□□□□ -0.97
LINC00840-201ENST00000431737 SMIM9A6NGZ8 99 aa9.01□□□□□ -0.97
LINC00840-201ENST00000431737 SLC25A29Q8N8R3 303 aa9.01□□□□□ -0.97
LINC00840-201ENST00000431737 ZNF815PA8K554 130 aa9□□□□□ -0.97
LINC00840-201ENST00000431737 FXYD2P54710 66 aa9□□□□□ -0.97
LINC00840-201ENST00000431737 TMEM170BQ5T4T1 132 aa9□□□□□ -0.97
LINC00840-201ENST00000431737 KIR2DL5BQ8NHK3 375 aa9□□□□□ -0.97
LINC00840-201ENST00000431737 PHLDA1Q8WV24 401 aaPredicted RBP9□□□□□ -0.97
LINC00840-201ENST00000431737 IGHV3-38A0A0C4DH36 116 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 GCSHP23434 173 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 UBE2V1Q13404 147 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 SBSPONQ8IVN8 264 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 TRGV2A0A075B6R0 118 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.99□□□□□ -0.97
LINC00840-201ENST00000431737 A0A0J9YXV3 536 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 GAGE12BA1L429 117 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 IGKV2-29A2NJV5 120 aaPredicted RBP8.99□□□□□ -0.97
LINC00840-201ENST00000431737 LEPROTO15243 131 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 GAGE7O76087 117 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 GAGE12FP0CL80 117 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 GAGE12GP0CL81 117 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 GAGE12IP0CL82 117 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 LINC00694P0DN24 101 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 TSPEAR-AS2P59090 65 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 GTSF1LQ9H1H1 148 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 CSDC2Q9Y534 153 aaKnown RBP8.99□□□□□ -0.97
LINC00840-201ENST00000431737 X6R8D5 127 aa8.99□□□□□ -0.97
LINC00840-201ENST00000431737 TINCRA0A1B0GVN0 87 aa8.98□□□□□ -0.97
LINC00840-201ENST00000431737 C9orf118A6NHY6 69 aa8.98□□□□□ -0.97
LINC00840-201ENST00000431737 Q6ZUT4 128 aa8.98□□□□□ -0.97
LINC00840-201ENST00000431737 J3QQQ9 107 aa8.97□□□□□ -0.97
LINC00840-201ENST00000431737 CEMP1Q6PRD7 247 aaPredicted RBP8.97□□□□□ -0.97
LINC00840-201ENST00000431737 OR5A1Q8NGJ0 315 aa8.97□□□□□ -0.97
LINC00840-201ENST00000431737 A0A1B0GWB2 263 aa8.97□□□□□ -0.97
LINC00840-201ENST00000431737 SMAGPQ0VAQ4 97 aa8.97□□□□□ -0.97
LINC00840-201ENST00000431737 FHL2Q14192 279 aa8.97□□□□□ -0.97
LINC00840-201ENST00000431737 NTM-AS1Q6ZSK4 140 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms