RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 PRSS29PA6NIE9 313 aa13.52□□□□□ -0.25
CSNK1E-207ENST00000430335 TMEM262E9PQX1 116 aa13.52□□□□□ -0.25
CSNK1E-207ENST00000430335 I3L3M4 83 aa13.52□□□□□ -0.25
CSNK1E-207ENST00000430335 SNAPINO95295 136 aa13.52□□□□□ -0.25
CSNK1E-207ENST00000430335 PPBPP02775 128 aa13.52□□□□□ -0.25
CSNK1E-207ENST00000430335 TMEM243Q9BU79 118 aa13.52□□□□□ -0.25
CSNK1E-207ENST00000430335 TRBV24-1A0A075B6N3 115 aa13.51□□□□□ -0.25
CSNK1E-207ENST00000430335 TRBV27A0A0K0K1C4 114 aa13.51□□□□□ -0.25
CSNK1E-207ENST00000430335 PMCHP20382 165 aa13.51□□□□□ -0.25
CSNK1E-207ENST00000430335 AMTP48728 403 aa13.51□□□□□ -0.25
CSNK1E-207ENST00000430335 ELOBQ15370 118 aa13.51□□□□□ -0.25
CSNK1E-207ENST00000430335 HECTD4Q9Y4D8 3996 aa13.5□□□□□ -0.25
CSNK1E-207ENST00000430335 D6R8Y8 96 aa13.5□□□□□ -0.25
CSNK1E-207ENST00000430335 SUMO2P61956 95 aaKnown RBP13.5□□□□□ -0.25
CSNK1E-207ENST00000430335 MPV17L2Q567V2 206 aa13.5□□□□□ -0.25
CSNK1E-207ENST00000430335 C20orf78Q9BR46 151 aa13.5□□□□□ -0.25
CSNK1E-207ENST00000430335 DNAH11Q96DT5 4516 aa13.5□□□□□ -0.25
CSNK1E-207ENST00000430335 VCYO14598 125 aa13.49□□□□□ -0.25
CSNK1E-207ENST00000430335 PHOX2AO14813 284 aa13.49□□□□□ -0.25
CSNK1E-207ENST00000430335 GAGE6Q13070 117 aa13.49□□□□□ -0.25
CSNK1E-207ENST00000430335 ATRAIDQ6UW56 229 aa13.49□□□□□ -0.25
CSNK1E-207ENST00000430335 DEFB104AQ8WTQ1 72 aa13.49□□□□□ -0.25
CSNK1E-207ENST00000430335 TRAV8-3A0A0A6YYJ7 113 aa13.48□□□□□ -0.25
CSNK1E-207ENST00000430335 APCSP02743 223 aa13.48□□□□□ -0.25
CSNK1E-207ENST00000430335 RPL32P62910 135 aaKnown RBP13.48□□□□□ -0.25
CSNK1E-207ENST00000430335 TNP2Q05952 138 aa13.48□□□□□ -0.25
CSNK1E-207ENST00000430335 SLC7A5P1Q8MH63 180 aa13.48□□□□□ -0.25
CSNK1E-207ENST00000430335 ORMDL3Q8N138 153 aa13.48□□□□□ -0.25
CSNK1E-207ENST00000430335 KLK12Q9UKR0 248 aa13.48□□□□□ -0.25
CSNK1E-207ENST00000430335 TNFRSF6BO95407 300 aa13.47□□□□□ -0.25
CSNK1E-207ENST00000430335 TSHBP01222 138 aa13.47□□□□□ -0.25
CSNK1E-207ENST00000430335 RBX1P62877 108 aa13.47□□□□□ -0.25
CSNK1E-207ENST00000430335 TMEM136Q6ZRR5 245 aa13.47□□□□□ -0.25
CSNK1E-207ENST00000430335 PKD1P98161 4303 aa13.46□□□□□ -0.25
CSNK1E-207ENST00000430335 A0A1B0GUV1 79 aa13.46□□□□□ -0.25
CSNK1E-207ENST00000430335 A0A1B0GVY2 172 aa13.46□□□□□ -0.25
CSNK1E-207ENST00000430335 H7C423 109 aa13.46□□□□□ -0.25
CSNK1E-207ENST00000430335 Q9HAA7 133 aa13.46□□□□□ -0.25
CSNK1E-207ENST00000430335 LAMTOR2Q9Y2Q5 125 aa13.46□□□□□ -0.25
CSNK1E-207ENST00000430335 UBE2L6O14933 153 aa13.45□□□□□ -0.26
CSNK1E-207ENST00000430335 NPYP01303 97 aa13.45□□□□□ -0.26
CSNK1E-207ENST00000430335 Q8N976 141 aa13.45□□□□□ -0.26
CSNK1E-207ENST00000430335 PRELID3AQ96N28 172 aa13.45□□□□□ -0.26
CSNK1E-207ENST00000430335 KIR2DL4Q99706 377 aa13.45□□□□□ -0.26
CSNK1E-207ENST00000430335 ANGP03950 147 aaKnown RBP13.44□□□□□ -0.26
CSNK1E-207ENST00000430335 ESDP10768 282 aa13.44□□□□□ -0.26
CSNK1E-207ENST00000430335 COX19Q49B96 90 aa13.44□□□□□ -0.26
CSNK1E-207ENST00000430335 GNB1LQ9BYB4 327 aa13.44□□□□□ -0.26
CSNK1E-207ENST00000430335 HLA-DQA1P01909 254 aa13.43□□□□□ -0.26
CSNK1E-207ENST00000430335 Q0VG73 95 aa13.43□□□□□ -0.26
CSNK1E-207ENST00000430335 UBE2WQ96B02 151 aa13.43□□□□□ -0.26
CSNK1E-207ENST00000430335 SMIM2Q9BVW6 85 aa13.43□□□□□ -0.26
CSNK1E-207ENST00000430335 TM2D2Q9BX73 214 aa13.43□□□□□ -0.26
CSNK1E-207ENST00000430335 TCAPO15273 167 aa13.42□□□□□ -0.26
CSNK1E-207ENST00000430335 PRR34Q9NV39 138 aa13.42□□□□□ -0.26
CSNK1E-207ENST00000430335 BIRC6Q9NR09 4857 aa13.41□□□□□ -0.26
CSNK1E-207ENST00000430335 DYNC1H1Q14204 4646 aaKnown RBP13.41□□□□□ -0.26
CSNK1E-207ENST00000430335 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.41□□□□□ -0.26
CSNK1E-207ENST00000430335 IGKV2-29A2NJV5 120 aaPredicted RBP13.41□□□□□ -0.26
CSNK1E-207ENST00000430335 PRSS47A8MTI9 375 aa13.41□□□□□ -0.26
CSNK1E-207ENST00000430335 FCER1GP30273 86 aa13.41□□□□□ -0.26
CSNK1E-207ENST00000430335 ENHOQ6UWT2 76 aa13.41□□□□□ -0.26
CSNK1E-207ENST00000430335 C20orf203Q8NBC4 194 aa13.41□□□□□ -0.26
CSNK1E-207ENST00000430335 RMI2Q96E14 147 aa13.41□□□□□ -0.26
CSNK1E-207ENST00000430335 COX11Q9Y6N1 276 aa13.41□□□□□ -0.26
CSNK1E-207ENST00000430335 IGLV4-60A0A075B6I1 120 aa13.4□□□□□ -0.26
CSNK1E-207ENST00000430335 CRPP02741 224 aa13.4□□□□□ -0.26
CSNK1E-207ENST00000430335 PSCAO43653 123 aa13.39□□□□□ -0.27
CSNK1E-207ENST00000430335 MT-ND6P03923 174 aa13.39□□□□□ -0.27
CSNK1E-207ENST00000430335 LINC00269Q8N2A0 174 aa13.39□□□□□ -0.27
CSNK1E-207ENST00000430335 FGF6P10767 208 aa13.38□□□□□ -0.27
CSNK1E-207ENST00000430335 ZNF25P17030 456 aaPredicted RBP13.38□□□□□ -0.27
CSNK1E-207ENST00000430335 MIAQ16674 131 aa13.38□□□□□ -0.27
CSNK1E-207ENST00000430335 AMMECR1LQ6DCA0 310 aa13.38□□□□□ -0.27
CSNK1E-207ENST00000430335 MAP1LC3AQ9H492 121 aa13.38□□□□□ -0.27
CSNK1E-207ENST00000430335 TGIF2-C20orf24A0A0A6YYL0 155 aa13.37□□□□□ -0.27
CSNK1E-207ENST00000430335 MRPL52Q86TS9 123 aaKnown RBP13.37□□□□□ -0.27
CSNK1E-207ENST00000430335 PKHD1P08F94 4074 aa13.37□□□□□ -0.27
CSNK1E-207ENST00000430335 IGKV2D-24A0A075B6R9 120 aa13.36□□□□□ -0.27
CSNK1E-207ENST00000430335 A0A087WTM6 91 aa13.36□□□□□ -0.27
CSNK1E-207ENST00000430335 REG3AQ06141 175 aa13.36□□□□□ -0.27
CSNK1E-207ENST00000430335 RNASEKQ6P5S7 137 aaKnown RBP13.36□□□□□ -0.27
CSNK1E-207ENST00000430335 DNAH5Q8TE73 4624 aa13.35□□□□□ -0.27
CSNK1E-207ENST00000430335 LRCOL1A6NCL2 159 aa13.35□□□□□ -0.27
CSNK1E-207ENST00000430335 EREGO14944 169 aa13.35□□□□□ -0.27
CSNK1E-207ENST00000430335 KIAA1644Q3SXP7 199 aa13.35□□□□□ -0.27
CSNK1E-207ENST00000430335 TMEM18Q96B42 140 aa13.35□□□□□ -0.27
CSNK1E-207ENST00000430335 YPEL4Q96NS1 127 aa13.35□□□□□ -0.27
CSNK1E-207ENST00000430335 C1orf43Q9BWL3 253 aa13.35□□□□□ -0.27
CSNK1E-207ENST00000430335 SMAGPQ0VAQ4 97 aa13.34□□□□□ -0.27
CSNK1E-207ENST00000430335 CLPSL2Q6UWE3 100 aa13.34□□□□□ -0.27
CSNK1E-207ENST00000430335 TMEM101Q96IK0 257 aa13.34□□□□□ -0.27
CSNK1E-207ENST00000430335 MRPL18Q9H0U6 180 aaKnown RBP13.34□□□□□ -0.27
CSNK1E-207ENST00000430335 LOC389332A0A1B0GUA5 103 aa13.33□□□□□ -0.28
CSNK1E-207ENST00000430335 RAB5AP20339 215 aa13.33□□□□□ -0.28
CSNK1E-207ENST00000430335 Q8N8P6 123 aa13.33□□□□□ -0.28
CSNK1E-207ENST00000430335 SMCO4Q9NRQ5 59 aa13.33□□□□□ -0.28
CSNK1E-207ENST00000430335 CSDC2Q9Y534 153 aaKnown RBP13.33□□□□□ -0.28
CSNK1E-207ENST00000430335 TRAV8-4A0A0B4J246 113 aa13.32□□□□□ -0.28
CSNK1E-207ENST00000430335 FABP9Q0Z7S8 132 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 130 ms