RNA–Protein interactions for RNA: ENST00000429896.6

PTCH1-207, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 6,563 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-207ENST00000429896 COX8AP10176 69 aa9.65□□□□□ -0.86
PTCH1-207ENST00000429896 ANKRD29Q8N6D5 301 aa9.65□□□□□ -0.86
PTCH1-207ENST00000429896 MSRB1Q9NZV6 116 aa9.65□□□□□ -0.86
PTCH1-207ENST00000429896 A0A1W2PPM0 123 aa9.65□□□□□ -0.86
PTCH1-207ENST00000429896 FAM110AQ9BQ89 295 aa9.65□□□□□ -0.86
PTCH1-207ENST00000429896 NAV3Q8IVL0 2385 aa9.65□□□□□ -0.86
PTCH1-207ENST00000429896 PPDPFLQ8WWR9 84 aa9.65□□□□□ -0.87
PTCH1-207ENST00000429896 RPL39P62891 51 aaKnown RBP9.64□□□□□ -0.87
PTCH1-207ENST00000429896 HHLA3Q9XRX5 114 aa9.64□□□□□ -0.87
PTCH1-207ENST00000429896 COX7A2LO14548 114 aa9.64□□□□□ -0.87
PTCH1-207ENST00000429896 TM2D2Q9BX73 214 aa9.64□□□□□ -0.87
PTCH1-207ENST00000429896 C12orf74Q32Q52 190 aa9.64□□□□□ -0.87
PTCH1-207ENST00000429896 IGKV2-24A0A0C4DH68 120 aa9.64□□□□□ -0.87
PTCH1-207ENST00000429896 MED14OSP0DP75 135 aa9.64□□□□□ -0.87
PTCH1-207ENST00000429896 YPEL4Q96NS1 127 aa9.63□□□□□ -0.87
PTCH1-207ENST00000429896 A0A096LNI7 61 aa9.63□□□□□ -0.87
PTCH1-207ENST00000429896 CCL25O15444 150 aa9.63□□□□□ -0.87
PTCH1-207ENST00000429896 DOPEY1Q5JWR5 2465 aa9.63□□□□□ -0.87
PTCH1-207ENST00000429896 FSHBP01225 129 aa9.63□□□□□ -0.87
PTCH1-207ENST00000429896 MIFP14174 115 aa9.63□□□□□ -0.87
PTCH1-207ENST00000429896 KRTAP24-1Q3LI83 254 aa9.63□□□□□ -0.87
PTCH1-207ENST00000429896 ZFP2Q6ZN57 461 aa9.63□□□□□ -0.87
PTCH1-207ENST00000429896 LGALS9BQ3B8N2 356 aa9.63□□□□□ -0.87
PTCH1-207ENST00000429896 LGALS9CQ6DKI2 356 aa9.63□□□□□ -0.87
PTCH1-207ENST00000429896 KIR2DL5BA0A0G2JN68 375 aa9.63□□□□□ -0.87
PTCH1-207ENST00000429896 KIR2DL5BA0A0G2JPC4 375 aa9.63□□□□□ -0.87
PTCH1-207ENST00000429896 K7EP34 96 aa9.63□□□□□ -0.87
PTCH1-207ENST00000429896 KIR2DL5AQ8N109 375 aa9.63□□□□□ -0.87
PTCH1-207ENST00000429896 LYRM9A8MSI8 78 aa9.62□□□□□ -0.87
PTCH1-207ENST00000429896 LINC00173Q6ZV60 143 aa9.62□□□□□ -0.87
PTCH1-207ENST00000429896 GTSF1Q8WW33 167 aa9.62□□□□□ -0.87
PTCH1-207ENST00000429896 HIGD2BQ4VC39 106 aa9.62□□□□□ -0.87
PTCH1-207ENST00000429896 C4orf48Q5BLP8 95 aa9.62□□□□□ -0.87
PTCH1-207ENST00000429896 C20orf78Q9BR46 151 aa9.62□□□□□ -0.87
PTCH1-207ENST00000429896 KLK12Q9UKR0 248 aa9.62□□□□□ -0.87
PTCH1-207ENST00000429896 K7EP13 123 aa9.62□□□□□ -0.87
PTCH1-207ENST00000429896 KIR2DL5BQ8NHK3 375 aa9.62□□□□□ -0.87
PTCH1-207ENST00000429896 IGLV1-51P01701 117 aa9.62□□□□□ -0.87
PTCH1-207ENST00000429896 WFDC10AQ9H1F0 79 aa9.62□□□□□ -0.87
PTCH1-207ENST00000429896 ARHGAP32A7KAX9 2087 aa9.61□□□□□ -0.87
PTCH1-207ENST00000429896 MUSTN1Q8IVN3 82 aa9.61□□□□□ -0.87
PTCH1-207ENST00000429896 MDFICQ9P1T7 246 aa9.61□□□□□ -0.87
PTCH1-207ENST00000429896 NUPR1O60356 82 aa9.6□□□□□ -0.87
PTCH1-207ENST00000429896 GDF5OSQ5U4N7 250 aa9.6□□□□□ -0.87
PTCH1-207ENST00000429896 H0Y9J4 135 aa9.6□□□□□ -0.87
PTCH1-207ENST00000429896 IGHV4-30-4P0DP06 118 aa9.6□□□□□ -0.87
PTCH1-207ENST00000429896 FAM222AQ5U5X8 452 aa9.6□□□□□ -0.87
PTCH1-207ENST00000429896 SND1-IT1Q9HBX3 110 aa9.6□□□□□ -0.87
PTCH1-207ENST00000429896 A0A096LNT2 108 aa9.6□□□□□ -0.87
PTCH1-207ENST00000429896 F8W1H4 67 aa9.6□□□□□ -0.87
PTCH1-207ENST00000429896 SS18L2Q9UHA2 77 aa9.6□□□□□ -0.87
PTCH1-207ENST00000429896 A0A0J9YXV3 536 aa9.59□□□□□ -0.87
PTCH1-207ENST00000429896 GAGE12HA6NDE8 117 aa9.59□□□□□ -0.87
PTCH1-207ENST00000429896 EDN2P20800 178 aa9.59□□□□□ -0.87
PTCH1-207ENST00000429896 DAZ2Q13117 558 aaKnown RBP9.59□□□□□ -0.87
PTCH1-207ENST00000429896 DAZ4Q86SG3 579 aaKnown RBP9.59□□□□□ -0.87
PTCH1-207ENST00000429896 DAZ3Q9NR90 486 aaKnown RBP9.59□□□□□ -0.87
PTCH1-207ENST00000429896 TNRC18O15417 2968 aaPredicted RBP9.59□□□□□ -0.87
PTCH1-207ENST00000429896 DCANP1Q8TF63 244 aa9.59□□□□□ -0.87
PTCH1-207ENST00000429896 CFC1BP0CG36 223 aa9.58□□□□□ -0.88
PTCH1-207ENST00000429896 CFC1P0CG37 223 aa9.58□□□□□ -0.88
PTCH1-207ENST00000429896 CEMP1Q6PRD7 247 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-207ENST00000429896 PRO0255Q9UI72 69 aa9.58□□□□□ -0.88
PTCH1-207ENST00000429896 FUSP35637 526 aaKnown RBP eCLIP9.58□□□□□ -0.88
PTCH1-207ENST00000429896 TP53TG3Q9ULZ0 132 aa9.58□□□□□ -0.88
PTCH1-207ENST00000429896 P0DMU3 169 aa9.58□□□□□ -0.88
PTCH1-207ENST00000429896 FAM231AP0DMU4 169 aa9.58□□□□□ -0.88
PTCH1-207ENST00000429896 FAM231CP0DMU5 169 aa9.58□□□□□ -0.88
PTCH1-207ENST00000429896 VSIG2Q96IQ7 327 aa9.58□□□□□ -0.88
PTCH1-207ENST00000429896 OPRPNQ99935 248 aaPredicted RBP9.58□□□□□ -0.88
PTCH1-207ENST00000429896 CLEC2BQ92478 149 aa9.58□□□□□ -0.88
PTCH1-207ENST00000429896 TTTY13Q9BZ97 58 aa9.58□□□□□ -0.88
PTCH1-207ENST00000429896 MRGPRG-AS1Q2M3A8 158 aa9.57□□□□□ -0.88
PTCH1-207ENST00000429896 Q6ZTI0 123 aa9.57□□□□□ -0.88
PTCH1-207ENST00000429896 DEFB131BA0A096LNP1 70 aa9.56□□□□□ -0.88
PTCH1-207ENST00000429896 ZNF80P51504 273 aaPredicted RBP9.56□□□□□ -0.88
PTCH1-207ENST00000429896 PRSS47A8MTI9 375 aa9.55□□□□□ -0.88
PTCH1-207ENST00000429896 TRBV7-3A0A075B6L6 115 aa9.55□□□□□ -0.88
PTCH1-207ENST00000429896 KRTAP1-3Q8IUG1 177 aa9.55□□□□□ -0.88
PTCH1-207ENST00000429896 TRAV26-1A0A087WT03 109 aa9.54□□□□□ -0.88
PTCH1-207ENST00000429896 ACYP1P07311 99 aa9.54□□□□□ -0.88
PTCH1-207ENST00000429896 ODF3L2Q3SX64 289 aa9.54□□□□□ -0.88
PTCH1-207ENST00000429896 NREPQ16612 68 aa9.54□□□□□ -0.88
PTCH1-207ENST00000429896 LRRK2Q5S007 2527 aa9.54□□□□□ -0.88
PTCH1-207ENST00000429896 NDUFB1O75438 58 aa9.54□□□□□ -0.88
PTCH1-207ENST00000429896 CTRLP40313 264 aa9.54□□□□□ -0.88
PTCH1-207ENST00000429896 TRAV10A0A0B4J240 114 aa9.53□□□□□ -0.88
PTCH1-207ENST00000429896 M0R2N4 97 aa9.53□□□□□ -0.88
PTCH1-207ENST00000429896 A4D1N5 150 aa9.53□□□□□ -0.88
PTCH1-207ENST00000429896 NDUFA1O15239 70 aa9.53□□□□□ -0.88
PTCH1-207ENST00000429896 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.53□□□□□ -0.88
PTCH1-207ENST00000429896 C19orf71A6NCJ1 209 aa9.53□□□□□ -0.88
PTCH1-207ENST00000429896 FRMD6-AS1P0C7T7 363 aa9.53□□□□□ -0.88
PTCH1-207ENST00000429896 B5MCH6 92 aa9.53□□□□□ -0.88
PTCH1-207ENST00000429896 IGLV2-8P01709 118 aa9.53□□□□□ -0.88
PTCH1-207ENST00000429896 ZFAND2AQ8N6M9 145 aa9.53□□□□□ -0.88
PTCH1-207ENST00000429896 IGKV2D-26A0A0A0MRZ7 120 aa9.53□□□□□ -0.88
PTCH1-207ENST00000429896 FASNP49327 2511 aaKnown RBP9.52□□□□□ -0.89
PTCH1-207ENST00000429896 HERV-K104P63124 156 aa9.52□□□□□ -0.89
PTCH1-207ENST00000429896 SPAG11BQ08648 103 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms