RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 MUC22E2RYF6 1773 aaPredicted RBP6.79□□□□□ -1.32
CTNND1-208ENST00000428599 IGHV4-31P0DP07 118 aa6.79□□□□□ -1.32
CTNND1-208ENST00000428599 KMT2EQ8IZD2 1858 aa6.78□□□□□ -1.32
CTNND1-208ENST00000428599 H3BT86 120 aa6.78□□□□□ -1.32
CTNND1-208ENST00000428599 ANKHD1Q8IWZ3 2542 aaKnown RBP6.78□□□□□ -1.32
CTNND1-208ENST00000428599 TEN1Q86WV5 123 aa6.78□□□□□ -1.32
CTNND1-208ENST00000428599 EML6Q6ZMW3 1958 aa6.78□□□□□ -1.32
CTNND1-208ENST00000428599 LY6G6CO95867 125 aa6.78□□□□□ -1.32
CTNND1-208ENST00000428599 UNQ9165/PRO28630Q6UXU0 137 aa6.78□□□□□ -1.32
CTNND1-208ENST00000428599 C3orf22Q8N5N4 141 aa6.78□□□□□ -1.32
CTNND1-208ENST00000428599 IGLV1-47P01700 117 aa6.77□□□□□ -1.33
CTNND1-208ENST00000428599 Q6ZTI0 123 aa6.77□□□□□ -1.33
CTNND1-208ENST00000428599 PLCE1Q9P212 2302 aa6.77□□□□□ -1.33
CTNND1-208ENST00000428599 CTRLP40313 264 aa6.77□□□□□ -1.33
CTNND1-208ENST00000428599 C10orf91Q5T1B1 145 aa6.77□□□□□ -1.33
CTNND1-208ENST00000428599 Q6ZUT4 128 aa6.77□□□□□ -1.33
CTNND1-208ENST00000428599 LYPD6Q86Y78 171 aa6.77□□□□□ -1.33
CTNND1-208ENST00000428599 ODF3Q96PU9 254 aa6.77□□□□□ -1.33
CTNND1-208ENST00000428599 DYSFO75923 2080 aa6.77□□□□□ -1.33
CTNND1-208ENST00000428599 HIGD1BQ9P298 99 aa6.77□□□□□ -1.33
CTNND1-208ENST00000428599 C22orf34Q6ZV56 151 aa6.77□□□□□ -1.33
CTNND1-208ENST00000428599 CACNA1AO00555 2505 aa6.76□□□□□ -1.33
CTNND1-208ENST00000428599 ALPK3Q96L96 1907 aa6.76□□□□□ -1.33
CTNND1-208ENST00000428599 DEFB1P60022 68 aa6.76□□□□□ -1.33
CTNND1-208ENST00000428599 MIAQ16674 131 aa6.76□□□□□ -1.33
CTNND1-208ENST00000428599 FOXI1Q12951 378 aa6.76□□□□□ -1.33
CTNND1-208ENST00000428599 SYCNQ0VAF6 134 aa6.75□□□□□ -1.33
CTNND1-208ENST00000428599 PTPN13Q12923 2485 aa6.75□□□□□ -1.33
CTNND1-208ENST00000428599 HIST2H2BDQ6DRA6 164 aa6.75□□□□□ -1.33
CTNND1-208ENST00000428599 HIVEP2P31629 2446 aa6.75□□□□□ -1.33
CTNND1-208ENST00000428599 TNRC6AQ8NDV7 1962 aaKnown RBP6.75□□□□□ -1.33
CTNND1-208ENST00000428599 NCOA6Q14686 2063 aaPredicted RBP6.75□□□□□ -1.33
CTNND1-208ENST00000428599 M0R2N4 97 aa6.75□□□□□ -1.33
CTNND1-208ENST00000428599 LMO4P61968 165 aa6.75□□□□□ -1.33
CTNND1-208ENST00000428599 SERP1Q9Y6X1 66 aa6.75□□□□□ -1.33
CTNND1-208ENST00000428599 DEFB114Q30KQ6 69 aa6.75□□□□□ -1.33
CTNND1-208ENST00000428599 C9orf85Q96MD7 179 aa6.75□□□□□ -1.33
CTNND1-208ENST00000428599 MED12LQ86YW9 2145 aa6.75□□□□□ -1.33
CTNND1-208ENST00000428599 IGLV2-18A0A075B6J9 118 aa6.74□□□□□ -1.33
CTNND1-208ENST00000428599 WFDC10BQ8IUB3 73 aa6.74□□□□□ -1.33
CTNND1-208ENST00000428599 TEX49A0A1B0GTD5 131 aa6.74□□□□□ -1.33
CTNND1-208ENST00000428599 CEMP1Q6PRD7 247 aaPredicted RBP6.74□□□□□ -1.33
CTNND1-208ENST00000428599 PIEZO1Q92508 2521 aa6.74□□□□□ -1.33
CTNND1-208ENST00000428599 PCNX3Q9H6A9 2034 aa6.74□□□□□ -1.33
CTNND1-208ENST00000428599 SPINK6Q6UWN8 80 aa6.74□□□□□ -1.33
CTNND1-208ENST00000428599 FAM167A-AS1Q96KT0 104 aa6.73□□□□□ -1.33
CTNND1-208ENST00000428599 UBE2D2P62837 147 aa6.73□□□□□ -1.33
CTNND1-208ENST00000428599 LINC00173Q6ZV60 143 aa6.73□□□□□ -1.33
CTNND1-208ENST00000428599 LY6G6DO95868 133 aa6.73□□□□□ -1.33
CTNND1-208ENST00000428599 P0DMU3 169 aa6.73□□□□□ -1.33
CTNND1-208ENST00000428599 FAM231AP0DMU4 169 aa6.73□□□□□ -1.33
CTNND1-208ENST00000428599 FAM231CP0DMU5 169 aa6.73□□□□□ -1.33
CTNND1-208ENST00000428599 NUP210LQ5VU65 1888 aa6.73□□□□□ -1.33
CTNND1-208ENST00000428599 FXYD2P54710 66 aa6.73□□□□□ -1.33
CTNND1-208ENST00000428599 SPANXB1Q9NS25 103 aaPredicted RBP6.73□□□□□ -1.33
CTNND1-208ENST00000428599 LINC00474Q9P2X8 69 aa6.73□□□□□ -1.33
CTNND1-208ENST00000428599 NCOR2Q9Y618 2525 aa6.72□□□□□ -1.33
CTNND1-208ENST00000428599 LINC00482Q8N8I6 264 aa6.72□□□□□ -1.33
CTNND1-208ENST00000428599 CCDC140Q96MF4 163 aa6.72□□□□□ -1.33
CTNND1-208ENST00000428599 V9GYY9 64 aa6.72□□□□□ -1.33
CTNND1-208ENST00000428599 CSPG4Q6UVK1 2322 aa6.72□□□□□ -1.33
CTNND1-208ENST00000428599 LY6LH3BQJ8 138 aa6.72□□□□□ -1.33
CTNND1-208ENST00000428599 TRAV23DV6A0A075B6W5 121 aa6.72□□□□□ -1.33
CTNND1-208ENST00000428599 IGLV2-14P01704 120 aa6.72□□□□□ -1.33
CTNND1-208ENST00000428599 TP53TG3Q9ULZ0 132 aa6.72□□□□□ -1.33
CTNND1-208ENST00000428599 ODF3BA8MYP8 253 aa6.72□□□□□ -1.33
CTNND1-208ENST00000428599 E7EUB6 86 aa6.71□□□□□ -1.33
CTNND1-208ENST00000428599 IGF1P05019 195 aa6.71□□□□□ -1.33
CTNND1-208ENST00000428599 LINC00643Q86TS7 51 aa6.71□□□□□ -1.33
CTNND1-208ENST00000428599 DSCAMO60469 2012 aa6.71□□□□□ -1.33
CTNND1-208ENST00000428599 DHRS4-AS1Q9P1J3 65 aa6.71□□□□□ -1.33
CTNND1-208ENST00000428599 IBA57-AS1B1ANH7 110 aa6.71□□□□□ -1.34
CTNND1-208ENST00000428599 TCL1BO95988 128 aa6.71□□□□□ -1.34
CTNND1-208ENST00000428599 CHD3Q12873 2000 aaKnown RBP6.71□□□□□ -1.34
CTNND1-208ENST00000428599 LOC107984640A0A0U1RRK4 108 aa6.71□□□□□ -1.34
CTNND1-208ENST00000428599 HRCT1Q6UXD1 115 aa6.71□□□□□ -1.34
CTNND1-208ENST00000428599 SPATA12Q7Z6I5 190 aa6.71□□□□□ -1.34
CTNND1-208ENST00000428599 TRBV6-8A0A0A6YYG3 113 aa6.7□□□□□ -1.34
CTNND1-208ENST00000428599 TRBV6-4A0A1B0GX49 114 aa6.7□□□□□ -1.34
CTNND1-208ENST00000428599 C10orf142B7Z368 130 aa6.7□□□□□ -1.34
CTNND1-208ENST00000428599 K7EQG2 157 aa6.7□□□□□ -1.34
CTNND1-208ENST00000428599 ODF1Q14990 250 aa6.7□□□□□ -1.34
CTNND1-208ENST00000428599 Q6ZSV7 163 aa6.7□□□□□ -1.34
CTNND1-208ENST00000428599 PPDPFQ9H3Y8 114 aa6.7□□□□□ -1.34
CTNND1-208ENST00000428599 A0A0J9YXY3 114 aa6.7□□□□□ -1.34
CTNND1-208ENST00000428599 ATP5EP2Q5VTU8 51 aa6.7□□□□□ -1.34
CTNND1-208ENST00000428599 LINC00467Q9BRT7 94 aa6.7□□□□□ -1.34
CTNND1-208ENST00000428599 NUPR2A6NF83 97 aa6.7□□□□□ -1.34
CTNND1-208ENST00000428599 PRR14LQ5THK1 2151 aa6.7□□□□□ -1.34
CTNND1-208ENST00000428599 IGF2RP11717 2491 aa6.69□□□□□ -1.34
CTNND1-208ENST00000428599 TTTY13Q9BZ97 58 aa6.69□□□□□ -1.34
CTNND1-208ENST00000428599 XAGE1AQ9HD64 81 aa6.69□□□□□ -1.34
CTNND1-208ENST00000428599 NEXN-AS1Q8NBZ9 246 aa6.69□□□□□ -1.34
CTNND1-208ENST00000428599 C1orf158Q8N1D5 194 aa6.69□□□□□ -1.34
CTNND1-208ENST00000428599 IGLV4-69A0A075B6H9 119 aa6.69□□□□□ -1.34
CTNND1-208ENST00000428599 A0A0U1RQV1 116 aa6.69□□□□□ -1.34
CTNND1-208ENST00000428599 FSHBP01225 129 aa6.69□□□□□ -1.34
CTNND1-208ENST00000428599 MPLKIPQ8TAP9 179 aa6.69□□□□□ -1.34
CTNND1-208ENST00000428599 WFDC2Q14508 124 aa6.69□□□□□ -1.34
CTNND1-208ENST00000428599 NACAE9PAV3 2078 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms