RNA–Protein interactions for RNA: ENST00000428425.1

NCBP2-205, Transcript of nuclear cap binding protein subunit 2, humanhuman

TSL 1 (best)

Gene NCBP2, Length 2,220 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2-205ENST00000428425 HIGD1BQ9P298 99 aa9.98□□□□□ -0.81
NCBP2-205ENST00000428425 TNFRSF18Q9Y5U5 241 aa9.98□□□□□ -0.81
NCBP2-205ENST00000428425 SEC11AP67812 179 aa9.97□□□□□ -0.81
NCBP2-205ENST00000428425 NAA38Q9BRA0 125 aaKnown RBP9.97□□□□□ -0.81
NCBP2-205ENST00000428425 IGHV3-53P01767 116 aa9.97□□□□□ -0.81
NCBP2-205ENST00000428425 GCSHP23434 173 aa9.97□□□□□ -0.81
NCBP2-205ENST00000428425 OR11H2Q8NH07 326 aa9.97□□□□□ -0.81
NCBP2-205ENST00000428425 PHLDA1Q8WV24 401 aaPredicted RBP9.97□□□□□ -0.81
NCBP2-205ENST00000428425 IGLV4-3A0A075B6K6 122 aa9.96□□□□□ -0.82
NCBP2-205ENST00000428425 E9PLD3 99 aa9.96□□□□□ -0.82
NCBP2-205ENST00000428425 NDUFA11Q86Y39 141 aa9.96□□□□□ -0.82
NCBP2-205ENST00000428425 ZNF479Q96JC4 524 aa9.96□□□□□ -0.82
NCBP2-205ENST00000428425 ATRQ13535 2644 aa9.96□□□□□ -0.82
NCBP2-205ENST00000428425 CRLF1O75462 422 aa9.95□□□□□ -0.82
NCBP2-205ENST00000428425 LINC00482Q8N8I6 264 aa9.95□□□□□ -0.82
NCBP2-205ENST00000428425 PLAC8L1A1L4L8 177 aa9.95□□□□□ -0.82
NCBP2-205ENST00000428425 PF4P02776 101 aa9.95□□□□□ -0.82
NCBP2-205ENST00000428425 RNASE13Q5GAN3 156 aaKnown RBP9.95□□□□□ -0.82
NCBP2-205ENST00000428425 MYMXA0A1B0GTQ4 84 aa9.94□□□□□ -0.82
NCBP2-205ENST00000428425 LINC01549A6NIU2 74 aa9.94□□□□□ -0.82
NCBP2-205ENST00000428425 RHODO00212 210 aa9.94□□□□□ -0.82
NCBP2-205ENST00000428425 TSPEAR-AS2P59090 65 aa9.94□□□□□ -0.82
NCBP2-205ENST00000428425 VAMP3Q15836 100 aa9.94□□□□□ -0.82
NCBP2-205ENST00000428425 CSNK1G2-AS1Q8NCQ2 148 aa9.94□□□□□ -0.82
NCBP2-205ENST00000428425 TMEM263Q8WUH6 116 aaKnown RBP9.94□□□□□ -0.82
NCBP2-205ENST00000428425 RAB37Q96AX2 223 aa9.94□□□□□ -0.82
NCBP2-205ENST00000428425 CHCHD7Q9BUK0 85 aa9.94□□□□□ -0.82
NCBP2-205ENST00000428425 NOP10Q9NPE3 64 aaKnown RBP9.94□□□□□ -0.82
NCBP2-205ENST00000428425 NBEAL2Q6ZNJ1 2754 aa9.94□□□□□ -0.82
NCBP2-205ENST00000428425 K7ERJ3 54 aa9.94□□□□□ -0.82
NCBP2-205ENST00000428425 PLEKHB2Q96CS7 222 aa9.94□□□□□ -0.82
NCBP2-205ENST00000428425 TEP1Q99973 2627 aaKnown RBP9.93□□□□□ -0.82
NCBP2-205ENST00000428425 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.93□□□□□ -0.82
NCBP2-205ENST00000428425 IGKV2-29A2NJV5 120 aaPredicted RBP9.93□□□□□ -0.82
NCBP2-205ENST00000428425 PTTG1IPP53801 180 aa9.93□□□□□ -0.82
NCBP2-205ENST00000428425 UBE2V1Q13404 147 aa9.93□□□□□ -0.82
NCBP2-205ENST00000428425 TMEM170BQ5T4T1 132 aa9.93□□□□□ -0.82
NCBP2-205ENST00000428425 AMMECR1LQ6DCA0 310 aa9.93□□□□□ -0.82
NCBP2-205ENST00000428425 OR4C5Q8NGB2 326 aa9.93□□□□□ -0.82
NCBP2-205ENST00000428425 A6NDN8 102 aa9.92□□□□□ -0.82
NCBP2-205ENST00000428425 FAM110AQ9BQ89 295 aa9.92□□□□□ -0.82
NCBP2-205ENST00000428425 TRRAPQ9Y4A5 3859 aa9.92□□□□□ -0.82
NCBP2-205ENST00000428425 A0A0J9YXV3 536 aa9.92□□□□□ -0.82
NCBP2-205ENST00000428425 ZNF815PA8K554 130 aa9.91□□□□□ -0.82
NCBP2-205ENST00000428425 CMC4P56277 68 aaPredicted RBP9.91□□□□□ -0.82
NCBP2-205ENST00000428425 CEND1Q8N111 149 aa9.91□□□□□ -0.82
NCBP2-205ENST00000428425 H3BRM9 83 aa9.91□□□□□ -0.82
NCBP2-205ENST00000428425 TRBV7-3A0A075B6L6 115 aa9.9□□□□□ -0.82
NCBP2-205ENST00000428425 NFE4Q86UQ8 179 aa9.9□□□□□ -0.82
NCBP2-205ENST00000428425 TM2D2Q9BX73 214 aa9.9□□□□□ -0.82
NCBP2-205ENST00000428425 VCX2Q9H322 139 aa9.9□□□□□ -0.82
NCBP2-205ENST00000428425 IGHV3-64A0A075B6Q5 118 aa9.9□□□□□ -0.83
NCBP2-205ENST00000428425 H3BUT2 72 aa9.9□□□□□ -0.83
NCBP2-205ENST00000428425 PAPPA-AS1Q5QFB9 102 aa9.9□□□□□ -0.83
NCBP2-205ENST00000428425 UBE2D4Q9Y2X8 147 aa9.9□□□□□ -0.83
NCBP2-205ENST00000428425 GAGE12BA1L429 117 aa9.89□□□□□ -0.83
NCBP2-205ENST00000428425 C9orf118A6NHY6 69 aa9.89□□□□□ -0.83
NCBP2-205ENST00000428425 GAGE7O76087 117 aa9.89□□□□□ -0.83
NCBP2-205ENST00000428425 GAGE12FP0CL80 117 aa9.89□□□□□ -0.83
NCBP2-205ENST00000428425 GAGE12GP0CL81 117 aa9.89□□□□□ -0.83
NCBP2-205ENST00000428425 GAGE12IP0CL82 117 aa9.89□□□□□ -0.83
NCBP2-205ENST00000428425 ZNF22P17026 224 aaPredicted RBP9.89□□□□□ -0.83
NCBP2-205ENST00000428425 SLC25A29Q8N8R3 303 aa9.89□□□□□ -0.83
NCBP2-205ENST00000428425 AMELXQ99217 191 aa9.89□□□□□ -0.83
NCBP2-205ENST00000428425 HIST1H4GQ99525 98 aa9.89□□□□□ -0.83
NCBP2-205ENST00000428425 NHP2Q9NX24 153 aaKnown RBP9.89□□□□□ -0.83
NCBP2-205ENST00000428425 PYGO1Q9Y3Y4 419 aa9.89□□□□□ -0.83
NCBP2-205ENST00000428425 Q6ZUT4 128 aa9.88□□□□□ -0.83
NCBP2-205ENST00000428425 DNAJC30Q96LL9 226 aa9.88□□□□□ -0.83
NCBP2-205ENST00000428425 DAZ2Q13117 558 aaKnown RBP9.88□□□□□ -0.83
NCBP2-205ENST00000428425 PRIMA1Q86XR5 153 aa9.88□□□□□ -0.83
NCBP2-205ENST00000428425 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.88□□□□□ -0.83
NCBP2-205ENST00000428425 C16orf74Q96GX8 76 aa9.88□□□□□ -0.83
NCBP2-205ENST00000428425 TRAV4A0A0B4J268 109 aa9.87□□□□□ -0.83
NCBP2-205ENST00000428425 HERVK_113P61574 105 aa9.87□□□□□ -0.83
NCBP2-205ENST00000428425 COTL1Q14019 142 aa9.87□□□□□ -0.83
NCBP2-205ENST00000428425 TMEM223A0PJW6 202 aa9.87□□□□□ -0.83
NCBP2-205ENST00000428425 K7EQD1 137 aa9.87□□□□□ -0.83
NCBP2-205ENST00000428425 RRN3P1Q2M238 152 aa9.87□□□□□ -0.83
NCBP2-205ENST00000428425 SCGB1D4Q6XE38 83 aa9.87□□□□□ -0.83
NCBP2-205ENST00000428425 LOC100131303A0A0U1RQF7 123 aa9.86□□□□□ -0.83
NCBP2-205ENST00000428425 GAGE12JA6NER3 117 aa9.86□□□□□ -0.83
NCBP2-205ENST00000428425 LINC00694P0DN24 101 aa9.86□□□□□ -0.83
NCBP2-205ENST00000428425 GAGE4Q13068 117 aa9.86□□□□□ -0.83
NCBP2-205ENST00000428425 GAGE5Q13069 117 aa9.86□□□□□ -0.83
NCBP2-205ENST00000428425 GAGE13Q4V321 117 aa9.86□□□□□ -0.83
NCBP2-205ENST00000428425 NTM-AS1Q6ZSK4 140 aa9.86□□□□□ -0.83
NCBP2-205ENST00000428425 C1QTNF4Q9BXJ3 329 aa9.86□□□□□ -0.83
NCBP2-205ENST00000428425 SMIM13P0DJ93 91 aa9.86□□□□□ -0.83
NCBP2-205ENST00000428425 TRGV2A0A075B6R0 118 aa9.85□□□□□ -0.83
NCBP2-205ENST00000428425 J3QQQ9 107 aa9.85□□□□□ -0.83
NCBP2-205ENST00000428425 TAL2Q16559 108 aa9.85□□□□□ -0.83
NCBP2-205ENST00000428425 A0A0J9YY99 117 aa9.84□□□□□ -0.83
NCBP2-205ENST00000428425 SPANXA1Q9NS26 97 aa9.84□□□□□ -0.83
NCBP2-205ENST00000428425 MRPS36P82909 103 aaKnown RBP9.84□□□□□ -0.83
NCBP2-205ENST00000428425 OVOL2Q9BRP0 275 aa9.84□□□□□ -0.83
NCBP2-205ENST00000428425 TRAV8-3A0A0A6YYJ7 113 aa9.83□□□□□ -0.84
NCBP2-205ENST00000428425 UBE2D3P61077 147 aa9.83□□□□□ -0.84
NCBP2-205ENST00000428425 UBE2D2P62837 147 aa9.83□□□□□ -0.84
NCBP2-205ENST00000428425 A0A1W2PPM0 123 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 1142.4 ms