RNA–Protein interactions for RNA: ENST00000427826.1

PHF1-204, Transcript of PHD finger protein 1, humanhuman

TSL 3

Gene PHF1, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-204ENST00000427826 HAMPP81172 84 aa9.95□□□□□ -0.82
PHF1-204ENST00000427826 CT83Q5H943 113 aa9.95□□□□□ -0.82
PHF1-204ENST00000427826 Q6ZSA8 131 aa9.95□□□□□ -0.82
PHF1-204ENST00000427826 PGLYRP4Q96LB8 373 aa9.95□□□□□ -0.82
PHF1-204ENST00000427826 PRR34Q9NV39 138 aa9.95□□□□□ -0.82
PHF1-204ENST00000427826 VPS13BQ7Z7G8 4022 aa9.95□□□□□ -0.82
PHF1-204ENST00000427826 TMEM241Q24JQ0 296 aa9.94□□□□□ -0.82
PHF1-204ENST00000427826 LINC00269Q8N2A0 174 aa9.94□□□□□ -0.82
PHF1-204ENST00000427826 BORCS7Q96B45 105 aa9.94□□□□□ -0.82
PHF1-204ENST00000427826 TMEM243Q9BU79 118 aa9.94□□□□□ -0.82
PHF1-204ENST00000427826 OSTCQ9NRP0 149 aa9.93□□□□□ -0.82
PHF1-204ENST00000427826 NAT8Q9UHE5 227 aa9.93□□□□□ -0.82
PHF1-204ENST00000427826 A0A1B0GUV1 79 aa9.92□□□□□ -0.82
PHF1-204ENST00000427826 COTL1Q14019 142 aa9.92□□□□□ -0.82
PHF1-204ENST00000427826 GTSF1Q8WW33 167 aa9.92□□□□□ -0.82
PHF1-204ENST00000427826 C9JQL5 133 aa9.91□□□□□ -0.82
PHF1-204ENST00000427826 UBE2L6O14933 153 aa9.91□□□□□ -0.82
PHF1-204ENST00000427826 HLA-DQA1P01909 254 aa9.91□□□□□ -0.82
PHF1-204ENST00000427826 SRSF3P84103 164 aaKnown RBP9.91□□□□□ -0.82
PHF1-204ENST00000427826 REG3AQ06141 175 aa9.91□□□□□ -0.82
PHF1-204ENST00000427826 ADIRFQ15847 76 aa9.91□□□□□ -0.82
PHF1-204ENST00000427826 GATD1Q8NB37 220 aa9.91□□□□□ -0.82
PHF1-204ENST00000427826 TRAV8-4A0A0B4J246 113 aa9.9□□□□□ -0.82
PHF1-204ENST00000427826 USP17L23D6RBM5 183 aa9.9□□□□□ -0.82
PHF1-204ENST00000427826 AMTP48728 403 aa9.9□□□□□ -0.82
PHF1-204ENST00000427826 FOXA3P55318 350 aaPredicted RBP9.9□□□□□ -0.82
PHF1-204ENST00000427826 RPL23P62829 140 aaKnown RBP9.9□□□□□ -0.82
PHF1-204ENST00000427826 LINC01620Q4KN68 170 aa9.9□□□□□ -0.82
PHF1-204ENST00000427826 CLPSL2Q6UWE3 100 aa9.9□□□□□ -0.82
PHF1-204ENST00000427826 TSKUQ8WUA8 353 aa9.9□□□□□ -0.82
PHF1-204ENST00000427826 ISOC2Q96AB3 205 aa9.9□□□□□ -0.82
PHF1-204ENST00000427826 GFRA4Q9GZZ7 299 aa9.9□□□□□ -0.82
PHF1-204ENST00000427826 FAM231BA6NCW3 169 aa9.89□□□□□ -0.83
PHF1-204ENST00000427826 PLA2G1BP04054 148 aaKnown RBP9.89□□□□□ -0.83
PHF1-204ENST00000427826 DGAT2L7PQ6IED9 249 aa9.89□□□□□ -0.83
PHF1-204ENST00000427826 SRRM2Q9UQ35 2752 aaKnown RBP9.89□□□□□ -0.83
PHF1-204ENST00000427826 TRAV26-2A0A0B4J265 109 aa9.88□□□□□ -0.83
PHF1-204ENST00000427826 HIGD1CA8MV81 97 aa9.88□□□□□ -0.83
PHF1-204ENST00000427826 C20orf203Q8NBC4 194 aa9.88□□□□□ -0.83
PHF1-204ENST00000427826 CLRN3Q8NCR9 226 aa9.88□□□□□ -0.83
PHF1-204ENST00000427826 CHAC1Q9BUX1 264 aa9.88□□□□□ -0.83
PHF1-204ENST00000427826 NCR2O95944 276 aa9.87□□□□□ -0.83
PHF1-204ENST00000427826 CLLU1Q5K131 121 aa9.87□□□□□ -0.83
PHF1-204ENST00000427826 KRTAP26-1Q6PEX3 210 aa9.87□□□□□ -0.83
PHF1-204ENST00000427826 V9GYV3 84 aa9.87□□□□□ -0.83
PHF1-204ENST00000427826 IGLV4-60A0A075B6I1 120 aa9.86□□□□□ -0.83
PHF1-204ENST00000427826 A0A1B0GUT8 65 aa9.86□□□□□ -0.83
PHF1-204ENST00000427826 PRSS1P07477 247 aa9.86□□□□□ -0.83
PHF1-204ENST00000427826 SCXQ7RTU7 201 aa9.86□□□□□ -0.83
PHF1-204ENST00000427826 IGLV10-54A0A075B6I4 117 aa9.85□□□□□ -0.83
PHF1-204ENST00000427826 H7C423 109 aa9.85□□□□□ -0.83
PHF1-204ENST00000427826 DEFB104AQ8WTQ1 72 aa9.85□□□□□ -0.83
PHF1-204ENST00000427826 RPL39LQ96EH5 51 aaKnown RBP9.85□□□□□ -0.83
PHF1-204ENST00000427826 NAT8BQ9UHF3 227 aa9.85□□□□□ -0.83
PHF1-204ENST00000427826 SDHAF1A6NFY7 115 aa9.84□□□□□ -0.83
PHF1-204ENST00000427826 RIGQ13278 110 aa9.84□□□□□ -0.83
PHF1-204ENST00000427826 AMMECR1LQ6DCA0 310 aa9.84□□□□□ -0.83
PHF1-204ENST00000427826 TRBV6-5A0A0K0K1A5 114 aa9.83□□□□□ -0.84
PHF1-204ENST00000427826 I3L3M4 83 aa9.83□□□□□ -0.84
PHF1-204ENST00000427826 APCSP02743 223 aa9.83□□□□□ -0.84
PHF1-204ENST00000427826 PMCHP20382 165 aa9.83□□□□□ -0.84
PHF1-204ENST00000427826 C9orf163Q8N9P6 203 aa9.83□□□□□ -0.84
PHF1-204ENST00000427826 NUP35Q8NFH5 326 aa9.83□□□□□ -0.84
PHF1-204ENST00000427826 CIRBP-AS1Q8TBR5 109 aa9.83□□□□□ -0.84
PHF1-204ENST00000427826 TMEM191AQ9H0A3 160 aa9.83□□□□□ -0.84
PHF1-204ENST00000427826 IFITM2Q01629 132 aa9.82□□□□□ -0.84
PHF1-204ENST00000427826 PNRC1Q12796 327 aaPredicted RBP9.82□□□□□ -0.84
PHF1-204ENST00000427826 ST20Q9HBF5 79 aa9.82□□□□□ -0.84
PHF1-204ENST00000427826 hDV102S1A0JD36 115 aa9.81□□□□□ -0.84
PHF1-204ENST00000427826 SMCPP49901 116 aaPredicted RBP9.81□□□□□ -0.84
PHF1-204ENST00000427826 CNBPP62633 177 aaKnown RBP9.81□□□□□ -0.84
PHF1-204ENST00000427826 RNASEKQ6P5S7 137 aaKnown RBP9.81□□□□□ -0.84
PHF1-204ENST00000427826 CFAP161Q6P656 301 aa9.81□□□□□ -0.84
PHF1-204ENST00000427826 MRAP2Q96G30 205 aa9.81□□□□□ -0.84
PHF1-204ENST00000427826 AP5S1Q9NUS5 200 aa9.81□□□□□ -0.84
PHF1-204ENST00000427826 DMBT1Q9UGM3 2413 aaPredicted RBP9.81□□□□□ -0.84
PHF1-204ENST00000427826 MYCBP2O75592 4640 aa9.8□□□□□ -0.84
PHF1-204ENST00000427826 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.8□□□□□ -0.84
PHF1-204ENST00000427826 SMIM27A0A1W2PRY6 76 aa9.8□□□□□ -0.84
PHF1-204ENST00000427826 PPP1R2P9O14990 202 aa9.8□□□□□ -0.84
PHF1-204ENST00000427826 ZNF25P17030 456 aaPredicted RBP9.8□□□□□ -0.84
PHF1-204ENST00000427826 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.79□□□□□ -0.84
PHF1-204ENST00000427826 IGKV2-29A2NJV5 120 aaPredicted RBP9.79□□□□□ -0.84
PHF1-204ENST00000427826 PPP1R17O96001 155 aa9.79□□□□□ -0.84
PHF1-204ENST00000427826 FGF6P10767 208 aa9.79□□□□□ -0.84
PHF1-204ENST00000427826 RAB4AP20338 218 aa9.79□□□□□ -0.84
PHF1-204ENST00000427826 UQCC3Q6UW78 93 aa9.79□□□□□ -0.84
PHF1-204ENST00000427826 TMEM101Q96IK0 257 aa9.79□□□□□ -0.84
PHF1-204ENST00000427826 BTF3L4Q96K17 158 aa9.79□□□□□ -0.84
PHF1-204ENST00000427826 FLG2Q5D862 2391 aaPredicted RBP9.78□□□□□ -0.84
PHF1-204ENST00000427826 IGKV3OR2-268A0A0C4DH90 116 aa9.78□□□□□ -0.84
PHF1-204ENST00000427826 A0A1B0GW15 77 aa9.78□□□□□ -0.84
PHF1-204ENST00000427826 GAGE12HA6NDE8 117 aa9.78□□□□□ -0.84
PHF1-204ENST00000427826 RNF185Q96GF1 192 aa9.78□□□□□ -0.84
PHF1-204ENST00000427826 HERC1Q15751 4861 aa9.77□□□□□ -0.85
PHF1-204ENST00000427826 S100A8P05109 93 aa9.77□□□□□ -0.85
PHF1-204ENST00000427826 SDIM1Q6ZPB5 146 aa9.77□□□□□ -0.85
PHF1-204ENST00000427826 AMN1Q8IY45 258 aa9.77□□□□□ -0.85
PHF1-204ENST00000427826 IGHV3-64A0A075B6Q5 118 aa9.76□□□□□ -0.85
PHF1-204ENST00000427826 TRBV27A0A0K0K1C4 114 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms