RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 LINC00482Q8N8I6 264 aa10.08□□□□□ -0.8
APOBEC3D-202ENST00000427494 ZNRF2Q8NHG8 242 aa10.08□□□□□ -0.8
APOBEC3D-202ENST00000427494 SETXQ7Z333 2677 aaKnown RBP10.08□□□□□ -0.8
APOBEC3D-202ENST00000427494 CCL25O15444 150 aa10.08□□□□□ -0.8
APOBEC3D-202ENST00000427494 FXYD2P54710 66 aa10.08□□□□□ -0.8
APOBEC3D-202ENST00000427494 Q6ZTI0 123 aa10.08□□□□□ -0.8
APOBEC3D-202ENST00000427494 IGHV3-38A0A0C4DH36 116 aa10.07□□□□□ -0.8
APOBEC3D-202ENST00000427494 FOSL1P15407 271 aa10.07□□□□□ -0.8
APOBEC3D-202ENST00000427494 CEND1Q8N111 149 aa10.07□□□□□ -0.8
APOBEC3D-202ENST00000427494 PHLDA1Q8WV24 401 aaPredicted RBP10.07□□□□□ -0.8
APOBEC3D-202ENST00000427494 ZNF479Q96JC4 524 aa10.07□□□□□ -0.8
APOBEC3D-202ENST00000427494 C1QTNF4Q9BXJ3 329 aa10.07□□□□□ -0.8
APOBEC3D-202ENST00000427494 VCX2Q9H322 139 aa10.07□□□□□ -0.8
APOBEC3D-202ENST00000427494 PYGO1Q9Y3Y4 419 aa10.07□□□□□ -0.8
APOBEC3D-202ENST00000427494 ZNF815PA8K554 130 aa10.06□□□□□ -0.8
APOBEC3D-202ENST00000427494 K7EP13 123 aa10.06□□□□□ -0.8
APOBEC3D-202ENST00000427494 C16orf74Q96GX8 76 aa10.06□□□□□ -0.8
APOBEC3D-202ENST00000427494 CHCHD7Q9BUK0 85 aa10.06□□□□□ -0.8
APOBEC3D-202ENST00000427494 NOP10Q9NPE3 64 aaKnown RBP10.06□□□□□ -0.8
APOBEC3D-202ENST00000427494 OTOGQ6ZRI0 2925 aa10.06□□□□□ -0.8
APOBEC3D-202ENST00000427494 TAL2Q16559 108 aa10.06□□□□□ -0.8
APOBEC3D-202ENST00000427494 NFE4Q86UQ8 179 aa10.06□□□□□ -0.8
APOBEC3D-202ENST00000427494 RAB37Q96AX2 223 aa10.06□□□□□ -0.8
APOBEC3D-202ENST00000427494 HIST1H4GQ99525 98 aa10.06□□□□□ -0.8
APOBEC3D-202ENST00000427494 TRAV4A0A0B4J268 109 aa10.05□□□□□ -0.8
APOBEC3D-202ENST00000427494 COTL1Q14019 142 aa10.05□□□□□ -0.8
APOBEC3D-202ENST00000427494 AMMECR1LQ6DCA0 310 aa10.05□□□□□ -0.8
APOBEC3D-202ENST00000427494 TM2D2Q9BX73 214 aa10.05□□□□□ -0.8
APOBEC3D-202ENST00000427494 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.05□□□□□ -0.8
APOBEC3D-202ENST00000427494 IGKV2-29A2NJV5 120 aaPredicted RBP10.05□□□□□ -0.8
APOBEC3D-202ENST00000427494 C9orf118A6NHY6 69 aa10.05□□□□□ -0.8
APOBEC3D-202ENST00000427494 DAZ2Q13117 558 aaKnown RBP10.05□□□□□ -0.8
APOBEC3D-202ENST00000427494 CEMP1Q6PRD7 247 aaPredicted RBP10.05□□□□□ -0.8
APOBEC3D-202ENST00000427494 CSNK1G2-AS1Q8NCQ2 148 aa10.05□□□□□ -0.8
APOBEC3D-202ENST00000427494 NIPBLQ6KC79 2804 aaeCLIP10.04□□□□□ -0.8
APOBEC3D-202ENST00000427494 PLAC8L1A1L4L8 177 aa10.04□□□□□ -0.8
APOBEC3D-202ENST00000427494 K7EQD1 137 aa10.04□□□□□ -0.8
APOBEC3D-202ENST00000427494 SMIM13P0DJ93 91 aa10.04□□□□□ -0.8
APOBEC3D-202ENST00000427494 SCGB1D4Q6XE38 83 aa10.04□□□□□ -0.8
APOBEC3D-202ENST00000427494 TRBV7-3A0A075B6L6 115 aa10.03□□□□□ -0.8
APOBEC3D-202ENST00000427494 A0A0J9YXV3 536 aa10.03□□□□□ -0.8
APOBEC3D-202ENST00000427494 H3BUT2 72 aa10.03□□□□□ -0.8
APOBEC3D-202ENST00000427494 RRN3P1Q2M238 152 aa10.03□□□□□ -0.8
APOBEC3D-202ENST00000427494 FAM104AQ969W3 186 aa10.03□□□□□ -0.8
APOBEC3D-202ENST00000427494 PLEKHB2Q96CS7 222 aa10.03□□□□□ -0.8
APOBEC3D-202ENST00000427494 AMELXQ99217 191 aa10.03□□□□□ -0.8
APOBEC3D-202ENST00000427494 NAA38Q9BRA0 125 aaKnown RBP10.03□□□□□ -0.8
APOBEC3D-202ENST00000427494 SPANXA1Q9NS26 97 aa10.03□□□□□ -0.8
APOBEC3D-202ENST00000427494 ZNF22P17026 224 aaPredicted RBP10.03□□□□□ -0.8
APOBEC3D-202ENST00000427494 TSPEAR-AS2P59090 65 aa10.03□□□□□ -0.8
APOBEC3D-202ENST00000427494 RNASE13Q5GAN3 156 aaKnown RBP10.03□□□□□ -0.8
APOBEC3D-202ENST00000427494 NHP2Q9NX24 153 aaKnown RBP10.03□□□□□ -0.8
APOBEC3D-202ENST00000427494 UBE2D4Q9Y2X8 147 aa10.03□□□□□ -0.8
APOBEC3D-202ENST00000427494 TMEM223A0PJW6 202 aa10.02□□□□□ -0.81
APOBEC3D-202ENST00000427494 GAGE12BA1L429 117 aa10.02□□□□□ -0.81
APOBEC3D-202ENST00000427494 K7ERJ3 54 aa10.02□□□□□ -0.81
APOBEC3D-202ENST00000427494 GAGE7O76087 117 aa10.02□□□□□ -0.81
APOBEC3D-202ENST00000427494 GAGE12FP0CL80 117 aa10.02□□□□□ -0.81
APOBEC3D-202ENST00000427494 GAGE12GP0CL81 117 aa10.02□□□□□ -0.81
APOBEC3D-202ENST00000427494 GAGE12IP0CL82 117 aa10.02□□□□□ -0.81
APOBEC3D-202ENST00000427494 CRYBA4P53673 196 aa10.01□□□□□ -0.81
APOBEC3D-202ENST00000427494 RPL36AP83881 106 aaKnown RBP10.01□□□□□ -0.81
APOBEC3D-202ENST00000427494 RPL36ALQ969Q0 106 aaKnown RBP10.01□□□□□ -0.81
APOBEC3D-202ENST00000427494 TRGV2A0A075B6R0 118 aa10.01□□□□□ -0.81
APOBEC3D-202ENST00000427494 TRBV10-1A0A0K0K1A3 114 aa10.01□□□□□ -0.81
APOBEC3D-202ENST00000427494 SLC25A29Q8N8R3 303 aa10.01□□□□□ -0.81
APOBEC3D-202ENST00000427494 JMJD1CQ15652 2540 aa10□□□□□ -0.81
APOBEC3D-202ENST00000427494 J3QQQ9 107 aa10□□□□□ -0.81
APOBEC3D-202ENST00000427494 LEPROTO15243 131 aa10□□□□□ -0.81
APOBEC3D-202ENST00000427494 CRLF1O75462 422 aa10□□□□□ -0.81
APOBEC3D-202ENST00000427494 LGALS3P17931 250 aaKnown RBP10□□□□□ -0.81
APOBEC3D-202ENST00000427494 Q6ZUT4 128 aa10□□□□□ -0.81
APOBEC3D-202ENST00000427494 SPATA3Q8NHX4 192 aa10□□□□□ -0.81
APOBEC3D-202ENST00000427494 NOTCH2Q04721 2471 aa10□□□□□ -0.81
APOBEC3D-202ENST00000427494 INSL3P51460 131 aa9.99□□□□□ -0.81
APOBEC3D-202ENST00000427494 C9orf66Q5T8R8 295 aa9.99□□□□□ -0.81
APOBEC3D-202ENST00000427494 OVOL2Q9BRP0 275 aa9.99□□□□□ -0.81
APOBEC3D-202ENST00000427494 IGHV3-64A0A075B6Q5 118 aa9.99□□□□□ -0.81
APOBEC3D-202ENST00000427494 GAGE12JA6NER3 117 aa9.99□□□□□ -0.81
APOBEC3D-202ENST00000427494 MRPS36P82909 103 aaKnown RBP9.99□□□□□ -0.81
APOBEC3D-202ENST00000427494 GAGE4Q13068 117 aa9.99□□□□□ -0.81
APOBEC3D-202ENST00000427494 GAGE5Q13069 117 aa9.99□□□□□ -0.81
APOBEC3D-202ENST00000427494 GAGE13Q4V321 117 aa9.99□□□□□ -0.81
APOBEC3D-202ENST00000427494 GAGE10A6NGK3 116 aa9.98□□□□□ -0.81
APOBEC3D-202ENST00000427494 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3D-202ENST00000427494 NSD1Q96L73 2696 aaPredicted RBP9.98□□□□□ -0.81
APOBEC3D-202ENST00000427494 A0A1W2PPM0 123 aa9.97□□□□□ -0.81
APOBEC3D-202ENST00000427494 UBE2D3P61077 147 aa9.97□□□□□ -0.81
APOBEC3D-202ENST00000427494 UBE2D2P62837 147 aa9.97□□□□□ -0.81
APOBEC3D-202ENST00000427494 SRSF9Q13242 221 aaKnown RBP eCLIP9.97□□□□□ -0.81
APOBEC3D-202ENST00000427494 C12orf74Q32Q52 190 aa9.97□□□□□ -0.81
APOBEC3D-202ENST00000427494 DAZ4Q86SG3 579 aaKnown RBP9.97□□□□□ -0.81
APOBEC3D-202ENST00000427494 DAZ3Q9NR90 486 aaKnown RBP9.97□□□□□ -0.81
APOBEC3D-202ENST00000427494 A0A0J9YY99 117 aa9.97□□□□□ -0.81
APOBEC3D-202ENST00000427494 SAMD5Q5TGI4 173 aa9.97□□□□□ -0.81
APOBEC3D-202ENST00000427494 FN1P02751 2386 aaKnown RBP9.97□□□□□ -0.81
APOBEC3D-202ENST00000427494 TINCRA0A1B0GVN0 87 aa9.96□□□□□ -0.81
APOBEC3D-202ENST00000427494 DGAT2L7PQ6IED9 249 aa9.96□□□□□ -0.81
APOBEC3D-202ENST00000427494 GTF2H5Q6ZYL4 71 aa9.96□□□□□ -0.81
APOBEC3D-202ENST00000427494 TIMM21Q9BVV7 248 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms