RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 PHOX2AO14813 284 aa3.78□□□□□ -1.8
C9orf3-205ENST00000427193 GATCO43716 136 aaKnown RBP3.78□□□□□ -1.8
C9orf3-205ENST00000427193 SPINK4O60575 86 aa3.78□□□□□ -1.8
C9orf3-205ENST00000427193 ARMS2P0C7Q2 107 aa3.78□□□□□ -1.8
C9orf3-205ENST00000427193 GZMBP10144 247 aa3.78□□□□□ -1.8
C9orf3-205ENST00000427193 RPS20P60866 119 aaKnown RBP3.78□□□□□ -1.8
C9orf3-205ENST00000427193 ELOBQ15370 118 aa3.78□□□□□ -1.8
C9orf3-205ENST00000427193 DEFB135Q30KP9 77 aa3.78□□□□□ -1.8
C9orf3-205ENST00000427193 MUC21Q5SSG8 566 aa3.78□□□□□ -1.8
C9orf3-205ENST00000427193 FAM159AQ6UWV7 190 aa3.78□□□□□ -1.8
C9orf3-205ENST00000427193 C15orf54Q8N8G6 183 aa3.78□□□□□ -1.8
C9orf3-205ENST00000427193 PHLDA1Q8WV24 401 aaPredicted RBP3.78□□□□□ -1.8
C9orf3-205ENST00000427193 C11orf68Q9H3H3 251 aaKnown RBP3.78□□□□□ -1.8
C9orf3-205ENST00000427193 GOLT1BQ9Y3E0 138 aa3.78□□□□□ -1.8
C9orf3-205ENST00000427193 KIF25-AS1Q9Y6Z4 181 aa3.78□□□□□ -1.8
C9orf3-205ENST00000427193 C5orf52A6NGY3 159 aa3.77□□□□□ -1.81
C9orf3-205ENST00000427193 COLCA2A8K830 154 aa3.77□□□□□ -1.81
C9orf3-205ENST00000427193 ZNF705GA8MUZ8 300 aaPredicted RBP3.77□□□□□ -1.81
C9orf3-205ENST00000427193 ORM1P02763 201 aa3.77□□□□□ -1.81
C9orf3-205ENST00000427193 MIFP14174 115 aa3.77□□□□□ -1.81
C9orf3-205ENST00000427193 SLAQ13239 276 aa3.77□□□□□ -1.81
C9orf3-205ENST00000427193 LGALS9BQ3B8N2 356 aa3.77□□□□□ -1.81
C9orf3-205ENST00000427193 LYZL1Q6UWQ5 148 aa3.77□□□□□ -1.81
C9orf3-205ENST00000427193 ATP5L2Q7Z4Y8 100 aa3.77□□□□□ -1.81
C9orf3-205ENST00000427193 FER1L6-AS1Q8NA97 138 aa3.77□□□□□ -1.81
C9orf3-205ENST00000427193 OR11H2Q8NH07 326 aa3.77□□□□□ -1.81
C9orf3-205ENST00000427193 OR10AG1Q8NH19 301 aa3.77□□□□□ -1.81
C9orf3-205ENST00000427193 LINC01587Q99440 93 aa3.77□□□□□ -1.81
C9orf3-205ENST00000427193 GSN-AS1Q9NRJ2 163 aa3.77□□□□□ -1.81
C9orf3-205ENST00000427193 NAT8BQ9UHF3 227 aa3.77□□□□□ -1.81
C9orf3-205ENST00000427193 A0A1B0GUT8 65 aa3.76□□□□□ -1.81
C9orf3-205ENST00000427193 GRIFINA4D1Z8 144 aa3.76□□□□□ -1.81
C9orf3-205ENST00000427193 M0R2P5 195 aa3.76□□□□□ -1.81
C9orf3-205ENST00000427193 LY6G6CO95867 125 aa3.76□□□□□ -1.81
C9orf3-205ENST00000427193 CRYGDP07320 174 aa3.76□□□□□ -1.81
C9orf3-205ENST00000427193 ASIPP42127 132 aa3.76□□□□□ -1.81
C9orf3-205ENST00000427193 RRN3P1Q2M238 152 aa3.76□□□□□ -1.81
C9orf3-205ENST00000427193 HIGD2BQ4VC39 106 aa3.76□□□□□ -1.81
C9orf3-205ENST00000427193 RASL11AQ6T310 242 aa3.76□□□□□ -1.81
C9orf3-205ENST00000427193 KRTAP5-2Q701N4 177 aa3.76□□□□□ -1.81
C9orf3-205ENST00000427193 CBLN2Q8IUK8 224 aa3.76□□□□□ -1.81
C9orf3-205ENST00000427193 C16orf74Q96GX8 76 aa3.76□□□□□ -1.81
C9orf3-205ENST00000427193 SMCO4Q9NRQ5 59 aa3.76□□□□□ -1.81
C9orf3-205ENST00000427193 TMSB15BA0A087X1C1 80 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 A0A1B0GW15 77 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 LYRM9A8MSI8 78 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 H3BVH4 76 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 RS1O15537 224 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 SCO1O75880 301 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 NTF3P20783 257 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 CACNG7P62955 275 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 ZNF415Q09FC8 603 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 TMEM136Q6ZRR5 245 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 Q6ZTI0 123 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 RNF185Q96GF1 192 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 BTF3L4Q96K17 158 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 ALKBH7Q9BT30 221 aaPredicted RBP3.75□□□□□ -1.81
C9orf3-205ENST00000427193 TMEM191AQ9H0A3 160 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 RETNQ9HD89 108 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 NAGKQ9UJ70 344 aa3.75□□□□□ -1.81
C9orf3-205ENST00000427193 TIMM8BQ9Y5J9 83 aaPredicted RBP3.75□□□□□ -1.81
C9orf3-205ENST00000427193 NACAE9PAV3 2078 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 TGIF2-C20orf24A0A0A6YYL0 155 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 LOC105371267A0A1B0GV96 52 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 RTL8CO15255 209 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 EVI2AP22794 236 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 CFAP126Q5VTH2 177 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 ZFP2Q6ZN57 461 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 ZFP82Q8N141 532 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 FRZBQ92765 325 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 PGLYRP4Q96LB8 373 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 TMEM208Q9BTX3 173 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 GNB1LQ9BYB4 327 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 SAMD10Q9BYL1 202 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 JPT2Q9H910 190 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 NOP10Q9NPE3 64 aaKnown RBP3.74□□□□□ -1.81
C9orf3-205ENST00000427193 CELA1Q9UNI1 258 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 DNAH17Q9UFH2 4485 aa3.74□□□□□ -1.81
C9orf3-205ENST00000427193 IGHV3OR16-12A0A075B7B8 117 aa3.73□□□□□ -1.81
C9orf3-205ENST00000427193 A8MWV9 139 aa3.73□□□□□ -1.81
C9orf3-205ENST00000427193 LINC00694P0DN24 101 aa3.73□□□□□ -1.81
C9orf3-205ENST00000427193 HBBP68871 147 aa3.73□□□□□ -1.81
C9orf3-205ENST00000427193 C12orf74Q32Q52 190 aa3.73□□□□□ -1.81
C9orf3-205ENST00000427193 FAM222AQ5U5X8 452 aa3.73□□□□□ -1.81
C9orf3-205ENST00000427193 FAM104BQ5XKR9 115 aa3.73□□□□□ -1.81
C9orf3-205ENST00000427193 LINC00336Q6ZUF6 198 aa3.73□□□□□ -1.81
C9orf3-205ENST00000427193 FAM210BQ96KR6 192 aa3.73□□□□□ -1.81
C9orf3-205ENST00000427193 PHLDA3Q9Y5J5 127 aa3.73□□□□□ -1.81
C9orf3-205ENST00000427193 URGCP-MRPS24S4R325 110 aa3.73□□□□□ -1.81
C9orf3-205ENST00000427193 TRAV4A0A0B4J268 109 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 MUC21A0A0G2JKD1 596 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 MUC21A0A140T8X8 626 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 TEX48A0A1B0GUV7 120 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 SNURFLB1AK76 121 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 M0QY20 66 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 M0R381 172 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 DEFB4AO15263 64 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 CDK2AP2O75956 126 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 IGHV3-53P01767 116 aa3.72□□□□□ -1.81
C9orf3-205ENST00000427193 MT-ND6P03923 174 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms